RNA–Protein interactions for RNA: ENST00000438354.6

LYVE1-202, Transcript of lymphatic vessel endothelial hyaluronan receptor 1, humanhuman

TSL 5

Gene LYVE1, Length 1,823 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYVE1-202ENST00000438354 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.69
LYVE1-202ENST00000438354 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.69
LYVE1-202ENST00000438354 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.7
LYVE1-202ENST00000438354 KIDINS220Q9ULH0 1771 aa10.7□□□□□ -0.7
LYVE1-202ENST00000438354 YEATS2Q9ULM3 1422 aa10.7□□□□□ -0.7
LYVE1-202ENST00000438354 PLEKHH2Q8IVE3 1493 aa10.7□□□□□ -0.7
LYVE1-202ENST00000438354 ZFYVE16Q7Z3T8 1539 aa10.69□□□□□ -0.7
LYVE1-202ENST00000438354 KDM5CP41229 1560 aa10.69□□□□□ -0.7
LYVE1-202ENST00000438354 SIGLEC1Q9BZZ2 1709 aa10.69□□□□□ -0.7
LYVE1-202ENST00000438354 INO80Q9ULG1 1556 aaPredicted RBP10.69□□□□□ -0.7
LYVE1-202ENST00000438354 NCOA1Q15788 1441 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 ADGBQ8N7X0 1667 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 ZNF518AQ6AHZ1 1483 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 NAIPQ13075 1403 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
LYVE1-202ENST00000438354 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
LYVE1-202ENST00000438354 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
LYVE1-202ENST00000438354 ATP7AQ04656 1500 aa10.67□□□□□ -0.7
LYVE1-202ENST00000438354 MAST1Q9Y2H9 1570 aa10.67□□□□□ -0.7
LYVE1-202ENST00000438354 SHANK2Q9UPX8 1470 aa10.66□□□□□ -0.7
LYVE1-202ENST00000438354 TSPY4P0CV99 314 aa10.66□□□□□ -0.7
LYVE1-202ENST00000438354 TSPY10P0CW01 314 aa10.66□□□□□ -0.7
LYVE1-202ENST00000438354 HECW2Q9P2P5 1572 aa10.66□□□□□ -0.7
LYVE1-202ENST00000438354 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
LYVE1-202ENST00000438354 MYT1LQ9UL68 1186 aa10.65□□□□□ -0.7
LYVE1-202ENST00000438354 KIF15Q9NS87 1388 aa10.65□□□□□ -0.7
LYVE1-202ENST00000438354 DIP2CQ9Y2E4 1556 aa10.65□□□□□ -0.7
LYVE1-202ENST00000438354 MLH3Q9UHC1 1453 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 HFM1A2PYH4 1435 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 ZMYM4Q5VZL5 1548 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 GCC2Q8IWJ2 1684 aa10.64□□□□□ -0.71
LYVE1-202ENST00000438354 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
LYVE1-202ENST00000438354 PLXNC1O60486 1568 aa10.63□□□□□ -0.71
LYVE1-202ENST00000438354 NLRP6P59044 892 aa10.63□□□□□ -0.71
LYVE1-202ENST00000438354 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
LYVE1-202ENST00000438354 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
LYVE1-202ENST00000438354 ANKRD30AQ9BXX3 1397 aa10.62□□□□□ -0.71
LYVE1-202ENST00000438354 RTEL1-TNFRSF6BF6WH68 1400 aa10.61□□□□□ -0.71
LYVE1-202ENST00000438354 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
LYVE1-202ENST00000438354 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
LYVE1-202ENST00000438354 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
LYVE1-202ENST00000438354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.61□□□□□ -0.71
LYVE1-202ENST00000438354 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
LYVE1-202ENST00000438354 SOX12O15370 315 aa10.6□□□□□ -0.71
LYVE1-202ENST00000438354 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
LYVE1-202ENST00000438354 ARHGEF40Q8TER5 1519 aa10.59□□□□□ -0.71
LYVE1-202ENST00000438354 A2MP01023 1474 aa10.59□□□□□ -0.71
LYVE1-202ENST00000438354 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
LYVE1-202ENST00000438354 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
LYVE1-202ENST00000438354 MROH1Q8NDA8 1641 aa10.57□□□□□ -0.72
LYVE1-202ENST00000438354 KIF3BO15066 747 aa10.56□□□□□ -0.72
LYVE1-202ENST00000438354 ATP10AO60312 1499 aa10.56□□□□□ -0.72
LYVE1-202ENST00000438354 MAGI2Q86UL8 1455 aa10.56□□□□□ -0.72
LYVE1-202ENST00000438354 MLECQ14165 292 aa10.55□□□□□ -0.72
LYVE1-202ENST00000438354 E2F4Q16254 413 aa10.55□□□□□ -0.72
LYVE1-202ENST00000438354 SEMA3EO15041 775 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 ERBINQ96RT1 1412 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 PZPP20742 1482 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 GGT6Q6P531 493 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 TRIM52Q96A61 297 aa10.54□□□□□ -0.72
LYVE1-202ENST00000438354 ARHGEF1Q92888 912 aaKnown RBP10.53□□□□□ -0.72
LYVE1-202ENST00000438354 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
LYVE1-202ENST00000438354 UNC13BO14795 1591 aa10.53□□□□□ -0.72
LYVE1-202ENST00000438354 DEPDC5O75140 1603 aa10.52□□□□□ -0.72
LYVE1-202ENST00000438354 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
LYVE1-202ENST00000438354 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
LYVE1-202ENST00000438354 NUP155O75694 1391 aa10.51□□□□□ -0.73
LYVE1-202ENST00000438354 CEP152O94986 1710 aa10.51□□□□□ -0.73
LYVE1-202ENST00000438354 RNF17Q9BXT8 1623 aaKnown RBP10.51□□□□□ -0.73
LYVE1-202ENST00000438354 EIF2AK4Q9P2K8 1649 aaKnown RBP10.51□□□□□ -0.73
LYVE1-202ENST00000438354 REREQ9P2R6 1566 aa10.51□□□□□ -0.73
LYVE1-202ENST00000438354 BCORL1Q5H9F3 1711 aa10.5□□□□□ -0.73
LYVE1-202ENST00000438354 ARID4BQ4LE39 1312 aaPredicted RBP10.49□□□□□ -0.73
LYVE1-202ENST00000438354 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
LYVE1-202ENST00000438354 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
LYVE1-202ENST00000438354 PRDM15P57071 1507 aaPredicted RBP10.49□□□□□ -0.73
LYVE1-202ENST00000438354 FAM135AQ9P2D6 1515 aa10.49□□□□□ -0.73
LYVE1-202ENST00000438354 CFAP65Q6ZU64 1925 aaKnown RBP10.49□□□□□ -0.73
LYVE1-202ENST00000438354 MPHOSPH9Q99550 1183 aa10.49□□□□□ -0.73
LYVE1-202ENST00000438354 VWDEQ8N2E2 1590 aa10.49□□□□□ -0.73
LYVE1-202ENST00000438354 AGLP35573 1532 aa10.48□□□□□ -0.73
LYVE1-202ENST00000438354 IQGAP3Q86VI3 1631 aa10.48□□□□□ -0.73
LYVE1-202ENST00000438354 KDM5DQ9BY66 1539 aa10.47□□□□□ -0.73
LYVE1-202ENST00000438354 ABCC3O15438 1527 aa10.47□□□□□ -0.73
LYVE1-202ENST00000438354 CLTCQ00610 1675 aaKnown RBP10.47□□□□□ -0.73
LYVE1-202ENST00000438354 TESPA1A2RU30 521 aaPredicted RBP10.47□□□□□ -0.73
LYVE1-202ENST00000438354 HRCP23327 699 aa10.47□□□□□ -0.73
LYVE1-202ENST00000438354 MFSD10Q14728 455 aa10.47□□□□□ -0.73
LYVE1-202ENST00000438354 E9PCH4 1651 aa10.46□□□□□ -0.73
LYVE1-202ENST00000438354 GOLGA2Q08379 1002 aa10.45□□□□□ -0.74
LYVE1-202ENST00000438354 ZC3H15Q8WU90 426 aaKnown RBP10.45□□□□□ -0.74
LYVE1-202ENST00000438354 SIN3AQ96ST3 1273 aa10.45□□□□□ -0.74
LYVE1-202ENST00000438354 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
LYVE1-202ENST00000438354 C19orf67A6NJJ6 358 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms