RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 CFAP70Q5T0N1 1121 aa27.3■■□□□ 1.96
CHRNA7-202ENST00000437966 POLR3GLQ9BT43 218 aa27.29■■□□□ 1.96
CHRNA7-202ENST00000437966 IFT172Q9UG01 1749 aa27.28■■□□□ 1.96
CHRNA7-202ENST00000437966 MYOM2P54296 1465 aa27.28■■□□□ 1.96
CHRNA7-202ENST00000437966 RPGRIP1LQ68CZ1 1315 aa27.25■■□□□ 1.95
CHRNA7-202ENST00000437966 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
CHRNA7-202ENST00000437966 PPLO60437 1756 aa27.23■■□□□ 1.95
CHRNA7-202ENST00000437966 LAMC1P11047 1609 aa27.22■■□□□ 1.95
CHRNA7-202ENST00000437966 STAG3Q9UJ98 1225 aa27.22■■□□□ 1.95
CHRNA7-202ENST00000437966 SPATA31D1Q6ZQQ2 1576 aa27.21■■□□□ 1.95
CHRNA7-202ENST00000437966 NRXN1Q9ULB1 1477 aa27.21■■□□□ 1.95
CHRNA7-202ENST00000437966 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.95
CHRNA7-202ENST00000437966 MYO5BQ9ULV0 1848 aa27.2■■□□□ 1.94
CHRNA7-202ENST00000437966 TMEM131LA2VDJ0 1609 aa27.2■■□□□ 1.94
CHRNA7-202ENST00000437966 CEBPAP49715 358 aaPredicted RBP27.2■■□□□ 1.94
CHRNA7-202ENST00000437966 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
CHRNA7-202ENST00000437966 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
CHRNA7-202ENST00000437966 PIK3C2GO75747 1445 aa27.15■■□□□ 1.94
CHRNA7-202ENST00000437966 POLR1AO95602 1720 aaPredicted RBP27.15■■□□□ 1.94
CHRNA7-202ENST00000437966 TESK2Q96S53 571 aa27.14■■□□□ 1.94
CHRNA7-202ENST00000437966 KIAA1210Q9ULL0 1709 aa27.14■■□□□ 1.94
CHRNA7-202ENST00000437966 C14orf93Q9H972 538 aaKnown RBP27.14■■□□□ 1.93
CHRNA7-202ENST00000437966 ANP32CO43423 234 aa27.13■■□□□ 1.93
CHRNA7-202ENST00000437966 SCAF11Q99590 1463 aaKnown RBP27.13■■□□□ 1.93
CHRNA7-202ENST00000437966 TMEM132EQ6IEE7 984 aa27.12■■□□□ 1.93
CHRNA7-202ENST00000437966 TNRQ92752 1358 aa27.12■■□□□ 1.93
CHRNA7-202ENST00000437966 IQGAP1P46940 1657 aa27.11■■□□□ 1.93
CHRNA7-202ENST00000437966 YTHDC1Q96MU7 727 aaKnown RBP27.1■■□□□ 1.93
CHRNA7-202ENST00000437966 A2ML1A8K2U0 1454 aa27.09■■□□□ 1.93
CHRNA7-202ENST00000437966 DISP3Q9P2K9 1392 aa27.08■■□□□ 1.93
CHRNA7-202ENST00000437966 TRAK1Q9UPV9 953 aa27.05■■□□□ 1.92
CHRNA7-202ENST00000437966 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
CHRNA7-202ENST00000437966 ZFYVE9O95405 1425 aa27.04■■□□□ 1.92
CHRNA7-202ENST00000437966 TMF1P82094 1093 aa27.03■■□□□ 1.92
CHRNA7-202ENST00000437966 RIMS2Q9UQ26 1411 aa27.02■■□□□ 1.92
CHRNA7-202ENST00000437966 C3P01024 1663 aa27.01■■□□□ 1.91
CHRNA7-202ENST00000437966 ADGRB1O14514 1584 aa27■■□□□ 1.91
CHRNA7-202ENST00000437966 SETBP1Q9Y6X0 1596 aa27■■□□□ 1.91
CHRNA7-202ENST00000437966 EIF3AQ14152 1382 aaKnown RBP27■■□□□ 1.91
CHRNA7-202ENST00000437966 CNGB1Q14028 1251 aaPredicted RBP27■■□□□ 1.91
CHRNA7-202ENST00000437966 STK26Q9P289 416 aa26.96■■□□□ 1.91
CHRNA7-202ENST00000437966 CENPJQ9HC77 1338 aaPredicted RBP26.92■■□□□ 1.9
CHRNA7-202ENST00000437966 ASXL1Q8IXJ9 1541 aa26.91■■□□□ 1.9
CHRNA7-202ENST00000437966 UBR1Q8IWV7 1749 aa26.9■■□□□ 1.9
CHRNA7-202ENST00000437966 RIMS1Q86UR5 1692 aaKnown RBP26.9■■□□□ 1.9
CHRNA7-202ENST00000437966 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.9■■□□□ 1.9
CHRNA7-202ENST00000437966 PRKRIP1Q9H875 184 aaPredicted RBP26.9■■□□□ 1.9
CHRNA7-202ENST00000437966 ALKQ9UM73 1620 aa26.89■■□□□ 1.9
CHRNA7-202ENST00000437966 CCER2I3L3R5 266 aa26.89■■□□□ 1.9
CHRNA7-202ENST00000437966 NLRP1Q9C000 1473 aa26.89■■□□□ 1.89
CHRNA7-202ENST00000437966 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
CHRNA7-202ENST00000437966 SAFB2Q14151 953 aaKnown RBP eCLIP26.86■■□□□ 1.89
CHRNA7-202ENST00000437966 BCANQ96GW7 911 aa26.86■■□□□ 1.89
CHRNA7-202ENST00000437966 PANK3Q9H999 370 aa26.86■■□□□ 1.89
CHRNA7-202ENST00000437966 MYO3AQ8NEV4 1616 aa26.84■■□□□ 1.89
CHRNA7-202ENST00000437966 HDGFP51858 240 aaKnown RBP26.84■■□□□ 1.89
CHRNA7-202ENST00000437966 PTPRMP28827 1452 aa26.84■■□□□ 1.89
CHRNA7-202ENST00000437966 LTKP29376 864 aa26.84■■□□□ 1.89
CHRNA7-202ENST00000437966 CDCA8Q53HL2 280 aa26.84■■□□□ 1.89
CHRNA7-202ENST00000437966 ADAMTSL3P82987 1691 aa26.82■■□□□ 1.88
CHRNA7-202ENST00000437966 YTHDC2Q9H6S0 1430 aaKnown RBP26.82■■□□□ 1.88
CHRNA7-202ENST00000437966 CCDC184Q52MB2 194 aa26.81■■□□□ 1.88
CHRNA7-202ENST00000437966 KDM5AP29375 1690 aaKnown RBP26.81■■□□□ 1.88
CHRNA7-202ENST00000437966 TXNDC2Q86VQ3 553 aa26.81■■□□□ 1.88
CHRNA7-202ENST00000437966 QRICH2Q9H0J4 1663 aa26.8■■□□□ 1.88
CHRNA7-202ENST00000437966 ARHGEF28Q8N1W1 1705 aaKnown RBP26.8■■□□□ 1.88
CHRNA7-202ENST00000437966 PER1O15534 1290 aaPredicted RBP26.79■■□□□ 1.88
CHRNA7-202ENST00000437966 NRXN3Q9Y4C0 1643 aa26.78■■□□□ 1.88
CHRNA7-202ENST00000437966 PRAM1Q96QH2 718 aa26.78■■□□□ 1.88
CHRNA7-202ENST00000437966 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
CHRNA7-202ENST00000437966 SLC24A1O60721 1099 aa26.77■■□□□ 1.88
CHRNA7-202ENST00000437966 METP08581 1390 aa26.77■■□□□ 1.88
CHRNA7-202ENST00000437966 POGKQ9P215 609 aa26.76■■□□□ 1.87
CHRNA7-202ENST00000437966 THEMISQ8N1K5 641 aaPredicted RBP26.75■■□□□ 1.87
CHRNA7-202ENST00000437966 SETD1AO15047 1707 aaKnown RBP26.74■■□□□ 1.87
CHRNA7-202ENST00000437966 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
CHRNA7-202ENST00000437966 CENPBP07199 599 aaPredicted RBP26.73■■□□□ 1.87
CHRNA7-202ENST00000437966 MINK1Q8N4C8 1332 aaPredicted RBP26.72■■□□□ 1.87
CHRNA7-202ENST00000437966 WAPLQ7Z5K2 1190 aa26.72■■□□□ 1.87
CHRNA7-202ENST00000437966 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
CHRNA7-202ENST00000437966 CC2D1BQ5T0F9 858 aaKnown RBP26.7■■□□□ 1.86
CHRNA7-202ENST00000437966 SLC26A8Q96RN1 970 aa26.7■■□□□ 1.86
CHRNA7-202ENST00000437966 PLEKHG1Q9ULL1 1385 aa26.7■■□□□ 1.86
CHRNA7-202ENST00000437966 MYOM1P52179 1685 aa26.69■■□□□ 1.86
CHRNA7-202ENST00000437966 EVC2Q86UK5 1308 aa26.69■■□□□ 1.86
CHRNA7-202ENST00000437966 ARHGAP23Q9P227 1491 aa26.69■■□□□ 1.86
CHRNA7-202ENST00000437966 CABP2Q9NPB3 220 aa26.69■■□□□ 1.86
CHRNA7-202ENST00000437966 SLIT1O75093 1534 aa26.68■■□□□ 1.86
CHRNA7-202ENST00000437966 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
CHRNA7-202ENST00000437966 TMC1Q8TDI8 760 aa26.68■■□□□ 1.86
CHRNA7-202ENST00000437966 MRS2Q9HD23 443 aa26.68■■□□□ 1.86
CHRNA7-202ENST00000437966 PLEKHH1Q9ULM0 1364 aa26.68■■□□□ 1.86
CHRNA7-202ENST00000437966 TULP4Q9NRJ4 1543 aa26.67■■□□□ 1.86
CHRNA7-202ENST00000437966 CEP170BQ9Y4F5 1589 aaPredicted RBP26.67■■□□□ 1.86
CHRNA7-202ENST00000437966 ABCC11Q96J66 1382 aa26.65■■□□□ 1.86
CHRNA7-202ENST00000437966 SLC12A5Q9H2X9 1139 aa26.65■■□□□ 1.86
CHRNA7-202ENST00000437966 KTN1Q86UP2 1357 aaKnown RBP26.64■■□□□ 1.86
CHRNA7-202ENST00000437966 KNSTRNQ9Y448 316 aa26.64■■□□□ 1.86
CHRNA7-202ENST00000437966 RALBP1Q15311 655 aa26.63■■□□□ 1.85
CHRNA7-202ENST00000437966 SRPK2P78362 688 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms