RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
COPS7B-212ENST00000436564 IDI1Q13907 227 aa17.12■□□□□ 0.33
COPS7B-212ENST00000436564 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-212ENST00000436564 KANK1Q14678 1352 aa17.12■□□□□ 0.33
COPS7B-212ENST00000436564 BCANQ96GW7 911 aa17.11■□□□□ 0.33
COPS7B-212ENST00000436564 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
COPS7B-212ENST00000436564 CEP152O94986 1710 aa17.1■□□□□ 0.33
COPS7B-212ENST00000436564 PRDM15P57071 1507 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-212ENST00000436564 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
COPS7B-212ENST00000436564 MSH6P52701 1360 aa17.08■□□□□ 0.32
COPS7B-212ENST00000436564 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
COPS7B-212ENST00000436564 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
COPS7B-212ENST00000436564 ABCB7O75027 752 aa17.06■□□□□ 0.32
COPS7B-212ENST00000436564 POLA2Q14181 598 aa17.06■□□□□ 0.32
COPS7B-212ENST00000436564 PIK3C2BO00750 1634 aa17.06■□□□□ 0.32
COPS7B-212ENST00000436564 ABCC5O15440 1437 aa17.05■□□□□ 0.32
COPS7B-212ENST00000436564 JCADQ9P266 1359 aa17.05■□□□□ 0.32
COPS7B-212ENST00000436564 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
COPS7B-212ENST00000436564 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
COPS7B-212ENST00000436564 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
COPS7B-212ENST00000436564 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
COPS7B-212ENST00000436564 SLC52A1Q9NWF4 448 aa17.03■□□□□ 0.32
COPS7B-212ENST00000436564 TET3O43151 1660 aa17.02■□□□□ 0.32
COPS7B-212ENST00000436564 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
COPS7B-212ENST00000436564 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
COPS7B-212ENST00000436564 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
COPS7B-212ENST00000436564 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
COPS7B-212ENST00000436564 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
COPS7B-212ENST00000436564 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
COPS7B-212ENST00000436564 ANKRD30AQ9BXX3 1397 aa17■□□□□ 0.31
COPS7B-212ENST00000436564 DAPK1P53355 1430 aa16.99■□□□□ 0.31
COPS7B-212ENST00000436564 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
COPS7B-212ENST00000436564 LMTK2Q8IWU2 1503 aa16.99■□□□□ 0.31
COPS7B-212ENST00000436564 NOS1P29475 1434 aa16.98■□□□□ 0.31
COPS7B-212ENST00000436564 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
COPS7B-212ENST00000436564 SPATA31A6Q5VVP1 1343 aa16.97■□□□□ 0.31
COPS7B-212ENST00000436564 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
COPS7B-212ENST00000436564 TRIM52Q96A61 297 aa16.97■□□□□ 0.31
COPS7B-212ENST00000436564 KDM5AP29375 1690 aaKnown RBP16.97■□□□□ 0.31
COPS7B-212ENST00000436564 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
COPS7B-212ENST00000436564 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
COPS7B-212ENST00000436564 ADGRB3O60242 1522 aa16.96■□□□□ 0.3
COPS7B-212ENST00000436564 PLEKHG1Q9ULL1 1385 aa16.95■□□□□ 0.3
COPS7B-212ENST00000436564 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
COPS7B-212ENST00000436564 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
COPS7B-212ENST00000436564 PTPN23Q9H3S7 1636 aa16.93■□□□□ 0.3
COPS7B-212ENST00000436564 ATF3P18847 181 aa16.93■□□□□ 0.3
COPS7B-212ENST00000436564 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
COPS7B-212ENST00000436564 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
COPS7B-212ENST00000436564 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
COPS7B-212ENST00000436564 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
COPS7B-212ENST00000436564 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
COPS7B-212ENST00000436564 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
COPS7B-212ENST00000436564 ZFYVE9O95405 1425 aa16.91■□□□□ 0.3
COPS7B-212ENST00000436564 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
COPS7B-212ENST00000436564 RXRBP28702 533 aa16.91■□□□□ 0.3
COPS7B-212ENST00000436564 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
COPS7B-212ENST00000436564 LRP6O75581 1613 aa16.9■□□□□ 0.3
COPS7B-212ENST00000436564 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
COPS7B-212ENST00000436564 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
COPS7B-212ENST00000436564 NUTM2BA6NNL0 878 aaPredicted RBP16.88■□□□□ 0.29
COPS7B-212ENST00000436564 NUTM2EB1AL46 878 aaPredicted RBP16.88■□□□□ 0.29
COPS7B-212ENST00000436564 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
COPS7B-212ENST00000436564 NUTM2AQ8IVF1 878 aaPredicted RBP16.88■□□□□ 0.29
COPS7B-212ENST00000436564 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
COPS7B-212ENST00000436564 BRINP3Q76B58 766 aa16.85■□□□□ 0.29
COPS7B-212ENST00000436564 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
COPS7B-212ENST00000436564 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
COPS7B-212ENST00000436564 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
COPS7B-212ENST00000436564 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
COPS7B-212ENST00000436564 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
COPS7B-212ENST00000436564 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
COPS7B-212ENST00000436564 CHD2O14647 1828 aaKnown RBP16.82■□□□□ 0.28
COPS7B-212ENST00000436564 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
COPS7B-212ENST00000436564 AFF2P51816 1311 aa16.81■□□□□ 0.28
COPS7B-212ENST00000436564 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
COPS7B-212ENST00000436564 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
COPS7B-212ENST00000436564 TMEM131LA2VDJ0 1609 aa16.79■□□□□ 0.28
COPS7B-212ENST00000436564 LRRC59Q96AG4 307 aaKnown RBP16.78■□□□□ 0.28
COPS7B-212ENST00000436564 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
COPS7B-212ENST00000436564 SHPRHQ149N8 1683 aa16.77■□□□□ 0.28
COPS7B-212ENST00000436564 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
COPS7B-212ENST00000436564 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
COPS7B-212ENST00000436564 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
COPS7B-212ENST00000436564 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
COPS7B-212ENST00000436564 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
COPS7B-212ENST00000436564 DCCP43146 1447 aa16.75■□□□□ 0.27
COPS7B-212ENST00000436564 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
COPS7B-212ENST00000436564 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
COPS7B-212ENST00000436564 TRPM2O94759 1503 aa16.74■□□□□ 0.27
COPS7B-212ENST00000436564 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
COPS7B-212ENST00000436564 RGS12O14924 1447 aa16.71■□□□□ 0.27
COPS7B-212ENST00000436564 MST1RQ04912 1400 aa16.71■□□□□ 0.27
COPS7B-212ENST00000436564 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
COPS7B-212ENST00000436564 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
COPS7B-212ENST00000436564 NGLY1Q96IV0 654 aa16.71■□□□□ 0.27
COPS7B-212ENST00000436564 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
COPS7B-212ENST00000436564 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
COPS7B-212ENST00000436564 NUP155O75694 1391 aa16.69■□□□□ 0.26
COPS7B-212ENST00000436564 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms