RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MED14O60244 1454 aa12.02□□□□□ -0.49
VPS50-203ENST00000436177 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
VPS50-203ENST00000436177 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
VPS50-203ENST00000436177 FAM50AQ14320 339 aaKnown RBP12.01□□□□□ -0.49
VPS50-203ENST00000436177 CHIC2Q9UKJ5 165 aa12.01□□□□□ -0.49
VPS50-203ENST00000436177 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
VPS50-203ENST00000436177 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
VPS50-203ENST00000436177 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
VPS50-203ENST00000436177 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
VPS50-203ENST00000436177 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
VPS50-203ENST00000436177 IQGAP1P46940 1657 aa11.99□□□□□ -0.49
VPS50-203ENST00000436177 CEP152O94986 1710 aa11.99□□□□□ -0.49
VPS50-203ENST00000436177 VWDEQ8N2E2 1590 aa11.98□□□□□ -0.49
VPS50-203ENST00000436177 ILDR2Q71H61 639 aa11.98□□□□□ -0.49
VPS50-203ENST00000436177 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
VPS50-203ENST00000436177 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
VPS50-203ENST00000436177 SOCS7O14512 581 aa11.97□□□□□ -0.49
VPS50-203ENST00000436177 HSPA1LP34931 641 aa11.97□□□□□ -0.49
VPS50-203ENST00000436177 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
VPS50-203ENST00000436177 SYNMO15061 1565 aa11.94□□□□□ -0.5
VPS50-203ENST00000436177 SLIT1O75093 1534 aa11.94□□□□□ -0.5
VPS50-203ENST00000436177 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
VPS50-203ENST00000436177 EFCAB6Q5THR3 1501 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
VPS50-203ENST00000436177 BCANQ96GW7 911 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 ARHGAP23Q9P227 1491 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
VPS50-203ENST00000436177 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
VPS50-203ENST00000436177 LTKP29376 864 aa11.92□□□□□ -0.5
VPS50-203ENST00000436177 PIK3C2BO00750 1634 aa11.9□□□□□ -0.5
VPS50-203ENST00000436177 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.5
VPS50-203ENST00000436177 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
VPS50-203ENST00000436177 IDI1Q13907 227 aa11.9□□□□□ -0.5
VPS50-203ENST00000436177 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
VPS50-203ENST00000436177 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
VPS50-203ENST00000436177 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.51
VPS50-203ENST00000436177 EVX2Q03828 476 aa11.89□□□□□ -0.51
VPS50-203ENST00000436177 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
VPS50-203ENST00000436177 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
VPS50-203ENST00000436177 NOS1P29475 1434 aa11.88□□□□□ -0.51
VPS50-203ENST00000436177 ADGRB3O60242 1522 aa11.88□□□□□ -0.51
VPS50-203ENST00000436177 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
VPS50-203ENST00000436177 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
VPS50-203ENST00000436177 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
VPS50-203ENST00000436177 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
VPS50-203ENST00000436177 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
VPS50-203ENST00000436177 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
VPS50-203ENST00000436177 KCNA6P17658 529 aa11.85□□□□□ -0.51
VPS50-203ENST00000436177 ITGAEP38570 1179 aa11.85□□□□□ -0.51
VPS50-203ENST00000436177 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
VPS50-203ENST00000436177 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
VPS50-203ENST00000436177 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
VPS50-203ENST00000436177 ALKQ9UM73 1620 aa11.83□□□□□ -0.52
VPS50-203ENST00000436177 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS50-203ENST00000436177 TET3O43151 1660 aa11.83□□□□□ -0.52
VPS50-203ENST00000436177 MSH6P52701 1360 aa11.82□□□□□ -0.52
VPS50-203ENST00000436177 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
VPS50-203ENST00000436177 RIMS2Q9UQ26 1411 aa11.82□□□□□ -0.52
VPS50-203ENST00000436177 NUP155O75694 1391 aa11.81□□□□□ -0.52
VPS50-203ENST00000436177 PLEKHG1Q9ULL1 1385 aa11.81□□□□□ -0.52
VPS50-203ENST00000436177 UNC13BO14795 1591 aa11.8□□□□□ -0.52
VPS50-203ENST00000436177 ZFYVE9O95405 1425 aa11.79□□□□□ -0.52
VPS50-203ENST00000436177 FAM135BQ49AJ0 1406 aa11.79□□□□□ -0.52
VPS50-203ENST00000436177 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
VPS50-203ENST00000436177 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
VPS50-203ENST00000436177 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
VPS50-203ENST00000436177 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
VPS50-203ENST00000436177 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
VPS50-203ENST00000436177 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
VPS50-203ENST00000436177 TBX22Q9Y458 520 aa11.76□□□□□ -0.53
VPS50-203ENST00000436177 TMEM131LA2VDJ0 1609 aa11.75□□□□□ -0.53
VPS50-203ENST00000436177 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
VPS50-203ENST00000436177 SLAIN2Q9P270 581 aa11.75□□□□□ -0.53
VPS50-203ENST00000436177 ATF3P18847 181 aa11.74□□□□□ -0.53
VPS50-203ENST00000436177 ZNF326Q5BKZ1 582 aaKnown RBP11.74□□□□□ -0.53
VPS50-203ENST00000436177 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
VPS50-203ENST00000436177 E9PCH4 1651 aa11.73□□□□□ -0.53
VPS50-203ENST00000436177 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
VPS50-203ENST00000436177 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
VPS50-203ENST00000436177 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
VPS50-203ENST00000436177 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
VPS50-203ENST00000436177 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
VPS50-203ENST00000436177 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
VPS50-203ENST00000436177 TRPM2O94759 1503 aa11.71□□□□□ -0.53
VPS50-203ENST00000436177 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
VPS50-203ENST00000436177 JCADQ9P266 1359 aa11.7□□□□□ -0.54
VPS50-203ENST00000436177 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
VPS50-203ENST00000436177 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
VPS50-203ENST00000436177 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
VPS50-203ENST00000436177 MYO5BQ9ULV0 1848 aa11.69□□□□□ -0.54
VPS50-203ENST00000436177 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
VPS50-203ENST00000436177 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
VPS50-203ENST00000436177 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
VPS50-203ENST00000436177 CHD2O14647 1828 aaKnown RBP11.67□□□□□ -0.54
VPS50-203ENST00000436177 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
VPS50-203ENST00000436177 DCCP43146 1447 aa11.65□□□□□ -0.54
VPS50-203ENST00000436177 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
VPS50-203ENST00000436177 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms