RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
CLNS1AP1-201ENST00000435954 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
CLNS1AP1-201ENST00000435954 PTPRTO14522 1441 aa11.71□□□□□ -0.53
CLNS1AP1-201ENST00000435954 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
CLNS1AP1-201ENST00000435954 PDIA6Q15084 440 aa11.71□□□□□ -0.53
CLNS1AP1-201ENST00000435954 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
CLNS1AP1-201ENST00000435954 DENND4BO75064 1496 aaPredicted RBP11.7□□□□□ -0.54
CLNS1AP1-201ENST00000435954 RAPGEF2Q9Y4G8 1499 aa11.7□□□□□ -0.54
CLNS1AP1-201ENST00000435954 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
CLNS1AP1-201ENST00000435954 LHX8Q68G74 356 aa11.69□□□□□ -0.54
CLNS1AP1-201ENST00000435954 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
CLNS1AP1-201ENST00000435954 TBC1D12O60347 775 aa11.67□□□□□ -0.54
CLNS1AP1-201ENST00000435954 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
CLNS1AP1-201ENST00000435954 STRCQ7RTU9 1775 aa11.67□□□□□ -0.54
CLNS1AP1-201ENST00000435954 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
CLNS1AP1-201ENST00000435954 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
CLNS1AP1-201ENST00000435954 MAGI2Q86UL8 1455 aa11.66□□□□□ -0.54
CLNS1AP1-201ENST00000435954 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
CLNS1AP1-201ENST00000435954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLNS1AP1-201ENST00000435954 SETD1BQ9UPS6 1966 aaKnown RBP11.66□□□□□ -0.54
CLNS1AP1-201ENST00000435954 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.54
CLNS1AP1-201ENST00000435954 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
CLNS1AP1-201ENST00000435954 PCDHGA4Q9Y5G9 962 aa11.65□□□□□ -0.54
CLNS1AP1-201ENST00000435954 RICTORQ6R327 1708 aa11.65□□□□□ -0.54
CLNS1AP1-201ENST00000435954 EVI5O60447 810 aa11.64□□□□□ -0.55
CLNS1AP1-201ENST00000435954 LTBP4Q8N2S1 1624 aa11.64□□□□□ -0.55
CLNS1AP1-201ENST00000435954 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
CLNS1AP1-201ENST00000435954 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
CLNS1AP1-201ENST00000435954 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
CLNS1AP1-201ENST00000435954 CTTNBP2Q8WZ74 1663 aa11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 ARHGEF12Q9NZN5 1544 aa11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 MLECQ14165 292 aa11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
CLNS1AP1-201ENST00000435954 ATP10BO94823 1461 aa11.61□□□□□ -0.55
CLNS1AP1-201ENST00000435954 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
CLNS1AP1-201ENST00000435954 UBAP1LF5GYI3 381 aa11.6□□□□□ -0.55
CLNS1AP1-201ENST00000435954 PTGER2P43116 358 aa11.59□□□□□ -0.55
CLNS1AP1-201ENST00000435954 ANO8Q9HCE9 1232 aaPredicted RBP11.59□□□□□ -0.55
CLNS1AP1-201ENST00000435954 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
CLNS1AP1-201ENST00000435954 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 SNPHO15079 494 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ARSIQ5FYB1 569 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
CLNS1AP1-201ENST00000435954 DDX12PQ92771 950 aa11.55□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ATP10AO60312 1499 aa11.55□□□□□ -0.56
CLNS1AP1-201ENST00000435954 SIGLEC1Q9BZZ2 1709 aa11.55□□□□□ -0.56
CLNS1AP1-201ENST00000435954 NCOA1Q15788 1441 aa11.54□□□□□ -0.56
CLNS1AP1-201ENST00000435954 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
CLNS1AP1-201ENST00000435954 HECW1Q76N89 1606 aa11.53□□□□□ -0.56
CLNS1AP1-201ENST00000435954 NUDT7P0C024 238 aa11.53□□□□□ -0.56
CLNS1AP1-201ENST00000435954 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
CLNS1AP1-201ENST00000435954 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
CLNS1AP1-201ENST00000435954 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
CLNS1AP1-201ENST00000435954 OSBPP22059 807 aa11.51□□□□□ -0.57
CLNS1AP1-201ENST00000435954 TRAPPC8Q9Y2L5 1435 aa11.5□□□□□ -0.57
CLNS1AP1-201ENST00000435954 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
CLNS1AP1-201ENST00000435954 TOM1O60784 492 aa11.48□□□□□ -0.57
CLNS1AP1-201ENST00000435954 ZC3H15Q8WU90 426 aaKnown RBP11.48□□□□□ -0.57
CLNS1AP1-201ENST00000435954 SCAPERQ9BY12 1400 aa11.47□□□□□ -0.57
CLNS1AP1-201ENST00000435954 PHF14O94880 888 aa11.47□□□□□ -0.57
CLNS1AP1-201ENST00000435954 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
CLNS1AP1-201ENST00000435954 HSPA1LP34931 641 aa11.47□□□□□ -0.57
CLNS1AP1-201ENST00000435954 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
CLNS1AP1-201ENST00000435954 C3P01024 1663 aa11.46□□□□□ -0.57
CLNS1AP1-201ENST00000435954 CNTLNQ9NXG0 1405 aa11.46□□□□□ -0.57
CLNS1AP1-201ENST00000435954 ZNF335Q9H4Z2 1342 aaPredicted RBP11.46□□□□□ -0.57
CLNS1AP1-201ENST00000435954 PCDHGA10Q9Y5H3 936 aa11.46□□□□□ -0.57
CLNS1AP1-201ENST00000435954 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.58
CLNS1AP1-201ENST00000435954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLNS1AP1-201ENST00000435954 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
CLNS1AP1-201ENST00000435954 EPAS1Q99814 870 aa11.45□□□□□ -0.58
CLNS1AP1-201ENST00000435954 LHX6Q9UPM6 363 aa11.44□□□□□ -0.58
CLNS1AP1-201ENST00000435954 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
CLNS1AP1-201ENST00000435954 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
CLNS1AP1-201ENST00000435954 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
CLNS1AP1-201ENST00000435954 NPATQ14207 1427 aa11.43□□□□□ -0.58
CLNS1AP1-201ENST00000435954 FOSBP53539 338 aa11.43□□□□□ -0.58
CLNS1AP1-201ENST00000435954 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
CLNS1AP1-201ENST00000435954 AGLP35573 1532 aa11.42□□□□□ -0.58
CLNS1AP1-201ENST00000435954 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
CLNS1AP1-201ENST00000435954 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
CLNS1AP1-201ENST00000435954 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
CLNS1AP1-201ENST00000435954 ZNF454Q8N9F8 522 aa11.41□□□□□ -0.58
CLNS1AP1-201ENST00000435954 CPS1P31327 1500 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 NUTM2FA1L443 756 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 PLCH2O75038 1416 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 PTPRKQ15262 1439 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 SAMD9Q5K651 1589 aa11.4□□□□□ -0.58
CLNS1AP1-201ENST00000435954 ZMYND10O75800 440 aa11.39□□□□□ -0.59
CLNS1AP1-201ENST00000435954 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms