RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
CLDN4-203ENST00000435050 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
CLDN4-203ENST00000435050 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
CLDN4-203ENST00000435050 APAF1O14727 1248 aa16■□□□□ 0.15
CLDN4-203ENST00000435050 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
CLDN4-203ENST00000435050 NEFMP07197 916 aa15.98■□□□□ 0.15
CLDN4-203ENST00000435050 KDM5DQ9BY66 1539 aa15.98■□□□□ 0.15
CLDN4-203ENST00000435050 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
CLDN4-203ENST00000435050 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
CLDN4-203ENST00000435050 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
CLDN4-203ENST00000435050 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLDN4-203ENST00000435050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLDN4-203ENST00000435050 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
CLDN4-203ENST00000435050 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
CLDN4-203ENST00000435050 SOX12O15370 315 aa15.97■□□□□ 0.15
CLDN4-203ENST00000435050 ATP10AO60312 1499 aa15.97■□□□□ 0.15
CLDN4-203ENST00000435050 KDM5CP41229 1560 aa15.96■□□□□ 0.15
CLDN4-203ENST00000435050 SCAF11Q99590 1463 aaKnown RBP15.96■□□□□ 0.15
CLDN4-203ENST00000435050 EXOC6Q8TAG9 804 aa15.96■□□□□ 0.14
CLDN4-203ENST00000435050 PRAM1Q96QH2 718 aa15.95■□□□□ 0.14
CLDN4-203ENST00000435050 FRAT1Q92837 279 aaPredicted RBP15.95■□□□□ 0.14
CLDN4-203ENST00000435050 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
CLDN4-203ENST00000435050 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
CLDN4-203ENST00000435050 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
CLDN4-203ENST00000435050 GOLGA2Q08379 1002 aa15.94■□□□□ 0.14
CLDN4-203ENST00000435050 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
CLDN4-203ENST00000435050 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
CLDN4-203ENST00000435050 RRP1P56182 461 aaKnown RBP15.93■□□□□ 0.14
CLDN4-203ENST00000435050 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
CLDN4-203ENST00000435050 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
CLDN4-203ENST00000435050 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
CLDN4-203ENST00000435050 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
CLDN4-203ENST00000435050 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
CLDN4-203ENST00000435050 GPRASP1Q5JY77 1395 aa15.91■□□□□ 0.14
CLDN4-203ENST00000435050 C14orf93Q9H972 538 aaKnown RBP15.91■□□□□ 0.14
CLDN4-203ENST00000435050 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
CLDN4-203ENST00000435050 MTHFSP49914 203 aa15.9■□□□□ 0.14
CLDN4-203ENST00000435050 LAS1LQ9Y4W2 734 aaKnown RBP15.9■□□□□ 0.14
CLDN4-203ENST00000435050 YEATS2Q9ULM3 1422 aa15.9■□□□□ 0.14
CLDN4-203ENST00000435050 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
CLDN4-203ENST00000435050 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
CLDN4-203ENST00000435050 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
CLDN4-203ENST00000435050 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
CLDN4-203ENST00000435050 NPATQ14207 1427 aa15.88■□□□□ 0.13
CLDN4-203ENST00000435050 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
CLDN4-203ENST00000435050 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
CLDN4-203ENST00000435050 IQGAP3Q86VI3 1631 aa15.88■□□□□ 0.13
CLDN4-203ENST00000435050 UNC13BO14795 1591 aa15.88■□□□□ 0.13
CLDN4-203ENST00000435050 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
CLDN4-203ENST00000435050 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
CLDN4-203ENST00000435050 C14orf37Q86TY3 774 aa15.87■□□□□ 0.13
CLDN4-203ENST00000435050 ANP32AP39687 249 aaKnown RBP15.86■□□□□ 0.13
CLDN4-203ENST00000435050 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
CLDN4-203ENST00000435050 TXNDC2Q86VQ3 553 aa15.86■□□□□ 0.13
CLDN4-203ENST00000435050 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
CLDN4-203ENST00000435050 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
CLDN4-203ENST00000435050 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
CLDN4-203ENST00000435050 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
CLDN4-203ENST00000435050 EIF2AK4Q9P2K8 1649 aaKnown RBP15.85■□□□□ 0.13
CLDN4-203ENST00000435050 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-203ENST00000435050 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
CLDN4-203ENST00000435050 RGS3P49796 1198 aa15.84■□□□□ 0.13
CLDN4-203ENST00000435050 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
CLDN4-203ENST00000435050 PRDM15P57071 1507 aaPredicted RBP15.83■□□□□ 0.12
CLDN4-203ENST00000435050 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
CLDN4-203ENST00000435050 PTPRTO14522 1441 aa15.83■□□□□ 0.12
CLDN4-203ENST00000435050 CDK19Q9BWU1 502 aa15.83■□□□□ 0.12
CLDN4-203ENST00000435050 TRPM2O94759 1503 aa15.82■□□□□ 0.12
CLDN4-203ENST00000435050 ABCA9Q8IUA7 1624 aa15.82■□□□□ 0.12
CLDN4-203ENST00000435050 CLUAP1Q96AJ1 413 aa15.81■□□□□ 0.12
CLDN4-203ENST00000435050 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
CLDN4-203ENST00000435050 SLC26A8Q96RN1 970 aa15.8■□□□□ 0.12
CLDN4-203ENST00000435050 CLTCL1P53675 1640 aa15.8■□□□□ 0.12
CLDN4-203ENST00000435050 E9PCH4 1651 aa15.79■□□□□ 0.12
CLDN4-203ENST00000435050 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
CLDN4-203ENST00000435050 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
CLDN4-203ENST00000435050 MAGI2Q86UL8 1455 aa15.79■□□□□ 0.12
CLDN4-203ENST00000435050 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
CLDN4-203ENST00000435050 FBLN1P23142 703 aa15.78■□□□□ 0.12
CLDN4-203ENST00000435050 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
CLDN4-203ENST00000435050 NEO1Q92859 1461 aa15.78■□□□□ 0.12
CLDN4-203ENST00000435050 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
CLDN4-203ENST00000435050 LRPPRCP42704 1394 aaKnown RBP15.76■□□□□ 0.11
CLDN4-203ENST00000435050 E9PSI1 815 aa15.76■□□□□ 0.11
CLDN4-203ENST00000435050 C20orf194Q5TEA3 1177 aa15.76■□□□□ 0.11
CLDN4-203ENST00000435050 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
CLDN4-203ENST00000435050 RUNDC1Q96C34 613 aa15.75■□□□□ 0.11
CLDN4-203ENST00000435050 TSPOAP1O95153 1857 aa15.75■□□□□ 0.11
CLDN4-203ENST00000435050 BCAR3O75815 825 aa15.75■□□□□ 0.11
CLDN4-203ENST00000435050 TET3O43151 1660 aa15.74■□□□□ 0.11
CLDN4-203ENST00000435050 HMOX1P09601 288 aa15.74■□□□□ 0.11
CLDN4-203ENST00000435050 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
CLDN4-203ENST00000435050 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLDN4-203ENST00000435050 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
CLDN4-203ENST00000435050 HECW2Q9P2P5 1572 aa15.73■□□□□ 0.11
CLDN4-203ENST00000435050 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
CLDN4-203ENST00000435050 COG6Q9Y2V7 657 aa15.72■□□□□ 0.11
CLDN4-203ENST00000435050 NBR1Q14596 966 aa15.72■□□□□ 0.11
CLDN4-203ENST00000435050 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
CLDN4-203ENST00000435050 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms