RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BCL2L13Q9BXK5 485 aa20.52■□□□□ 0.88
SCARF1-203ENST00000434376 KDM5DQ9BY66 1539 aa20.52■□□□□ 0.88
SCARF1-203ENST00000434376 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
SCARF1-203ENST00000434376 MORC1Q86VD1 984 aa20.52■□□□□ 0.88
SCARF1-203ENST00000434376 FBLN1P23142 703 aa20.51■□□□□ 0.87
SCARF1-203ENST00000434376 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-203ENST00000434376 CARD14Q9BXL6 1004 aa20.5■□□□□ 0.87
SCARF1-203ENST00000434376 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
SCARF1-203ENST00000434376 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
SCARF1-203ENST00000434376 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-203ENST00000434376 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
SCARF1-203ENST00000434376 PLEKHG5O94827 1062 aa20.48■□□□□ 0.87
SCARF1-203ENST00000434376 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-203ENST00000434376 NOS1P29475 1434 aa20.48■□□□□ 0.87
SCARF1-203ENST00000434376 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
SCARF1-203ENST00000434376 POGKQ9P215 609 aa20.47■□□□□ 0.87
SCARF1-203ENST00000434376 RGS3P49796 1198 aa20.47■□□□□ 0.87
SCARF1-203ENST00000434376 IDI1Q13907 227 aa20.47■□□□□ 0.87
SCARF1-203ENST00000434376 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-203ENST00000434376 ATP10AO60312 1499 aa20.46■□□□□ 0.87
SCARF1-203ENST00000434376 SPINK5Q9NQ38 1064 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-203ENST00000434376 PARD3Q8TEW0 1356 aa20.45■□□□□ 0.86
SCARF1-203ENST00000434376 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
SCARF1-203ENST00000434376 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
SCARF1-203ENST00000434376 ABCC1P33527 1531 aa20.44■□□□□ 0.86
SCARF1-203ENST00000434376 SOX12O15370 315 aa20.44■□□□□ 0.86
SCARF1-203ENST00000434376 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
SCARF1-203ENST00000434376 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
SCARF1-203ENST00000434376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCARF1-203ENST00000434376 BCAR3O75815 825 aa20.42■□□□□ 0.86
SCARF1-203ENST00000434376 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
SCARF1-203ENST00000434376 COL17A1Q9UMD9 1497 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-203ENST00000434376 GOLGA2Q08379 1002 aa20.4■□□□□ 0.86
SCARF1-203ENST00000434376 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-203ENST00000434376 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
SCARF1-203ENST00000434376 MAST1Q9Y2H9 1570 aa20.4■□□□□ 0.86
SCARF1-203ENST00000434376 ATP7AQ04656 1500 aa20.39■□□□□ 0.86
SCARF1-203ENST00000434376 MTHFSP49914 203 aa20.39■□□□□ 0.85
SCARF1-203ENST00000434376 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-203ENST00000434376 SHROOM2Q13796 1616 aa20.39■□□□□ 0.85
SCARF1-203ENST00000434376 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
SCARF1-203ENST00000434376 ERICH6BQ5W0A0 696 aa20.38■□□□□ 0.85
SCARF1-203ENST00000434376 CLASP1Q7Z460 1538 aa20.38■□□□□ 0.85
SCARF1-203ENST00000434376 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
SCARF1-203ENST00000434376 ESF1Q9H501 851 aaKnown RBP20.37■□□□□ 0.85
SCARF1-203ENST00000434376 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
SCARF1-203ENST00000434376 EIF3AQ14152 1382 aaKnown RBP20.36■□□□□ 0.85
SCARF1-203ENST00000434376 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
SCARF1-203ENST00000434376 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
SCARF1-203ENST00000434376 PRAM1Q96QH2 718 aa20.35■□□□□ 0.85
SCARF1-203ENST00000434376 SCAF11Q99590 1463 aaKnown RBP20.34■□□□□ 0.85
SCARF1-203ENST00000434376 TRPM1Q7Z4N2 1603 aa20.34■□□□□ 0.85
SCARF1-203ENST00000434376 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.85
SCARF1-203ENST00000434376 SLC4A3P48751 1232 aa20.33■□□□□ 0.84
SCARF1-203ENST00000434376 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
SCARF1-203ENST00000434376 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
SCARF1-203ENST00000434376 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
SCARF1-203ENST00000434376 E9PCH4 1651 aa20.3■□□□□ 0.84
SCARF1-203ENST00000434376 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-203ENST00000434376 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
SCARF1-203ENST00000434376 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
SCARF1-203ENST00000434376 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 NPATQ14207 1427 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 PRDM15P57071 1507 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-203ENST00000434376 IQGAP3Q86VI3 1631 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 UNC13BO14795 1591 aa20.29■□□□□ 0.84
SCARF1-203ENST00000434376 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
SCARF1-203ENST00000434376 PDE3BQ13370 1112 aa20.28■□□□□ 0.84
SCARF1-203ENST00000434376 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-203ENST00000434376 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
SCARF1-203ENST00000434376 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.84
SCARF1-203ENST00000434376 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
SCARF1-203ENST00000434376 NEFMP07197 916 aa20.27■□□□□ 0.83
SCARF1-203ENST00000434376 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.83
SCARF1-203ENST00000434376 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
SCARF1-203ENST00000434376 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
SCARF1-203ENST00000434376 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
SCARF1-203ENST00000434376 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
SCARF1-203ENST00000434376 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
SCARF1-203ENST00000434376 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-203ENST00000434376 PDE4AP27815 886 aa20.24■□□□□ 0.83
SCARF1-203ENST00000434376 TXNDC2Q86VQ3 553 aa20.23■□□□□ 0.83
SCARF1-203ENST00000434376 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
SCARF1-203ENST00000434376 HMOX1P09601 288 aa20.22■□□□□ 0.83
SCARF1-203ENST00000434376 CEBPAP49715 358 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-203ENST00000434376 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
SCARF1-203ENST00000434376 PTPRTO14522 1441 aa20.2■□□□□ 0.82
SCARF1-203ENST00000434376 SLFN5Q08AF3 891 aa20.2■□□□□ 0.82
SCARF1-203ENST00000434376 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
SCARF1-203ENST00000434376 ZRANB1Q9UGI0 708 aa20.19■□□□□ 0.82
SCARF1-203ENST00000434376 RNF123Q5XPI4 1314 aa20.19■□□□□ 0.82
SCARF1-203ENST00000434376 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
SCARF1-203ENST00000434376 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-203ENST00000434376 TRPM2O94759 1503 aa20.18■□□□□ 0.82
SCARF1-203ENST00000434376 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
SCARF1-203ENST00000434376 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
SCARF1-203ENST00000434376 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms