RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
NEFM-202ENST00000433454 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
NEFM-202ENST00000433454 NEXMIFQ5QGS0 1516 aa14.81□□□□□ -0.04
NEFM-202ENST00000433454 MYO5BQ9ULV0 1848 aa14.81□□□□□ -0.04
NEFM-202ENST00000433454 WASHC2AQ641Q2 1341 aa14.81□□□□□ -0.04
NEFM-202ENST00000433454 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
NEFM-202ENST00000433454 ADGRF5Q8IZF2 1346 aa14.81□□□□□ -0.04
NEFM-202ENST00000433454 PIK3C2GO75747 1445 aa14.79□□□□□ -0.04
NEFM-202ENST00000433454 CCDC7Q96M83 1385 aa14.79□□□□□ -0.04
NEFM-202ENST00000433454 IQGAP1P46940 1657 aa14.78□□□□□ -0.04
NEFM-202ENST00000433454 ST20-MTHFSA0A0A6YYL1 179 aa14.77□□□□□ -0.04
NEFM-202ENST00000433454 MIER1Q8N108 512 aa14.77□□□□□ -0.05
NEFM-202ENST00000433454 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
NEFM-202ENST00000433454 TNRQ92752 1358 aa14.77□□□□□ -0.05
NEFM-202ENST00000433454 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
NEFM-202ENST00000433454 ZFYVE9O95405 1425 aa14.76□□□□□ -0.05
NEFM-202ENST00000433454 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
NEFM-202ENST00000433454 C11orf95C9JLR9 678 aaPredicted RBP14.76□□□□□ -0.05
NEFM-202ENST00000433454 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
NEFM-202ENST00000433454 SETBP1Q9Y6X0 1596 aa14.76□□□□□ -0.05
NEFM-202ENST00000433454 C3P01024 1663 aa14.76□□□□□ -0.05
NEFM-202ENST00000433454 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
NEFM-202ENST00000433454 CFAP70Q5T0N1 1121 aa14.74□□□□□ -0.05
NEFM-202ENST00000433454 KDM5AP29375 1690 aaKnown RBP14.74□□□□□ -0.05
NEFM-202ENST00000433454 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
NEFM-202ENST00000433454 C14orf93Q9H972 538 aaKnown RBP14.72□□□□□ -0.05
NEFM-202ENST00000433454 NUTM2DQ5VT03 806 aaPredicted RBP14.71□□□□□ -0.05
NEFM-202ENST00000433454 NLRP1Q9C000 1473 aa14.71□□□□□ -0.05
NEFM-202ENST00000433454 ADGRB1O14514 1584 aa14.71□□□□□ -0.06
NEFM-202ENST00000433454 CEBPAP49715 358 aaPredicted RBP14.69□□□□□ -0.06
NEFM-202ENST00000433454 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
NEFM-202ENST00000433454 RIMS2Q9UQ26 1411 aa14.69□□□□□ -0.06
NEFM-202ENST00000433454 RIMS1Q86UR5 1692 aaKnown RBP14.69□□□□□ -0.06
NEFM-202ENST00000433454 TESK2Q96S53 571 aa14.69□□□□□ -0.06
NEFM-202ENST00000433454 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
NEFM-202ENST00000433454 POLR3GLQ9BT43 218 aa14.67□□□□□ -0.06
NEFM-202ENST00000433454 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
NEFM-202ENST00000433454 ANP32CO43423 234 aa14.66□□□□□ -0.06
NEFM-202ENST00000433454 TMF1P82094 1093 aa14.66□□□□□ -0.06
NEFM-202ENST00000433454 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.65□□□□□ -0.06
NEFM-202ENST00000433454 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
NEFM-202ENST00000433454 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
NEFM-202ENST00000433454 ALKQ9UM73 1620 aa14.64□□□□□ -0.07
NEFM-202ENST00000433454 HDGFP51858 240 aaKnown RBP14.64□□□□□ -0.07
NEFM-202ENST00000433454 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
NEFM-202ENST00000433454 ASXL1Q8IXJ9 1541 aa14.64□□□□□ -0.07
NEFM-202ENST00000433454 SLC24A1O60721 1099 aa14.63□□□□□ -0.07
NEFM-202ENST00000433454 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
NEFM-202ENST00000433454 SBNO2Q9Y2G9 1366 aa14.62□□□□□ -0.07
NEFM-202ENST00000433454 ARHGEF28Q8N1W1 1705 aaKnown RBP14.62□□□□□ -0.07
NEFM-202ENST00000433454 CENPJQ9HC77 1338 aaPredicted RBP14.62□□□□□ -0.07
NEFM-202ENST00000433454 TRAK1Q9UPV9 953 aa14.61□□□□□ -0.07
NEFM-202ENST00000433454 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
NEFM-202ENST00000433454 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
NEFM-202ENST00000433454 SETD1AO15047 1707 aaKnown RBP14.6□□□□□ -0.07
NEFM-202ENST00000433454 NRXN3Q9Y4C0 1643 aa14.6□□□□□ -0.07
NEFM-202ENST00000433454 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
NEFM-202ENST00000433454 SLIT1O75093 1534 aa14.59□□□□□ -0.07
NEFM-202ENST00000433454 CEP170BQ9Y4F5 1589 aaPredicted RBP14.59□□□□□ -0.07
NEFM-202ENST00000433454 YTHDC2Q9H6S0 1430 aaKnown RBP14.58□□□□□ -0.07
NEFM-202ENST00000433454 PTPRMP28827 1452 aa14.58□□□□□ -0.08
NEFM-202ENST00000433454 ARHGAP23Q9P227 1491 aa14.57□□□□□ -0.08
NEFM-202ENST00000433454 ZNF142P52746 1687 aaPredicted RBP14.56□□□□□ -0.08
NEFM-202ENST00000433454 THEMISQ8N1K5 641 aaPredicted RBP14.56□□□□□ -0.08
NEFM-202ENST00000433454 CCER2I3L3R5 266 aa14.56□□□□□ -0.08
NEFM-202ENST00000433454 EID1Q9Y6B2 187 aa14.56□□□□□ -0.08
NEFM-202ENST00000433454 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
NEFM-202ENST00000433454 STK26Q9P289 416 aa14.55□□□□□ -0.08
NEFM-202ENST00000433454 SETD1BQ9UPS6 1966 aaKnown RBP14.55□□□□□ -0.08
NEFM-202ENST00000433454 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
NEFM-202ENST00000433454 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
NEFM-202ENST00000433454 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
NEFM-202ENST00000433454 MYOM1P52179 1685 aa14.53□□□□□ -0.08
NEFM-202ENST00000433454 LTKP29376 864 aa14.53□□□□□ -0.08
NEFM-202ENST00000433454 BCANQ96GW7 911 aa14.53□□□□□ -0.08
NEFM-202ENST00000433454 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
NEFM-202ENST00000433454 ADAMTS13Q76LX8 1427 aa14.52□□□□□ -0.09
NEFM-202ENST00000433454 KNDC1Q76NI1 1749 aa14.51□□□□□ -0.09
NEFM-202ENST00000433454 METP08581 1390 aa14.51□□□□□ -0.09
NEFM-202ENST00000433454 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
NEFM-202ENST00000433454 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
NEFM-202ENST00000433454 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
NEFM-202ENST00000433454 TULP4Q9NRJ4 1543 aa14.5□□□□□ -0.09
NEFM-202ENST00000433454 PANK3Q9H999 370 aa14.5□□□□□ -0.09
NEFM-202ENST00000433454 POGKQ9P215 609 aa14.5□□□□□ -0.09
NEFM-202ENST00000433454 EVC2Q86UK5 1308 aa14.49□□□□□ -0.09
NEFM-202ENST00000433454 SAFB2Q14151 953 aaKnown RBP eCLIP14.49□□□□□ -0.09
NEFM-202ENST00000433454 DIP2AQ14689 1571 aa14.49□□□□□ -0.09
NEFM-202ENST00000433454 TECPR2O15040 1411 aa14.48□□□□□ -0.09
NEFM-202ENST00000433454 MED14O60244 1454 aa14.48□□□□□ -0.09
NEFM-202ENST00000433454 CPS1P31327 1500 aa14.48□□□□□ -0.09
NEFM-202ENST00000433454 KTN1Q86UP2 1357 aaKnown RBP14.48□□□□□ -0.09
NEFM-202ENST00000433454 PER1O15534 1290 aaPredicted RBP14.47□□□□□ -0.09
NEFM-202ENST00000433454 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
NEFM-202ENST00000433454 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
NEFM-202ENST00000433454 MINK1Q8N4C8 1332 aaPredicted RBP14.45□□□□□ -0.1
NEFM-202ENST00000433454 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
NEFM-202ENST00000433454 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
NEFM-202ENST00000433454 SLC26A8Q96RN1 970 aa14.44□□□□□ -0.1
NEFM-202ENST00000433454 RALBP1Q15311 655 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms