RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 PTPRTO14522 1441 aa21.61■■□□□ 1.05
PMS1-212ENST00000432292 KIDINS220Q9ULH0 1771 aa21.6■■□□□ 1.05
PMS1-212ENST00000432292 KTN1Q86UP2 1357 aaKnown RBP21.6■■□□□ 1.05
PMS1-212ENST00000432292 TRPM2O94759 1503 aa21.6■■□□□ 1.05
PMS1-212ENST00000432292 PRDM15P57071 1507 aaPredicted RBP21.58■■□□□ 1.05
PMS1-212ENST00000432292 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
PMS1-212ENST00000432292 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
PMS1-212ENST00000432292 POGZQ7Z3K3 1410 aa21.56■■□□□ 1.04
PMS1-212ENST00000432292 TET3O43151 1660 aa21.56■■□□□ 1.04
PMS1-212ENST00000432292 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
PMS1-212ENST00000432292 NLRP13Q86W25 1043 aa21.55■■□□□ 1.04
PMS1-212ENST00000432292 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
PMS1-212ENST00000432292 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
PMS1-212ENST00000432292 EIF2AK4Q9P2K8 1649 aaKnown RBP21.54■■□□□ 1.04
PMS1-212ENST00000432292 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
PMS1-212ENST00000432292 PDE4AP27815 886 aa21.52■■□□□ 1.04
PMS1-212ENST00000432292 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
PMS1-212ENST00000432292 KNSTRNQ9Y448 316 aa21.52■■□□□ 1.04
PMS1-212ENST00000432292 BRD4O60885 1362 aaPredicted RBP21.52■■□□□ 1.03
PMS1-212ENST00000432292 MADDQ8WXG6 1647 aa21.52■■□□□ 1.03
PMS1-212ENST00000432292 USP35Q9P2H5 1018 aa21.51■■□□□ 1.03
PMS1-212ENST00000432292 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
PMS1-212ENST00000432292 VWDEQ8N2E2 1590 aa21.51■■□□□ 1.03
PMS1-212ENST00000432292 SLC4A3P48751 1232 aa21.51■■□□□ 1.03
PMS1-212ENST00000432292 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
PMS1-212ENST00000432292 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
PMS1-212ENST00000432292 SKAP1Q86WV1 359 aa21.49■■□□□ 1.03
PMS1-212ENST00000432292 NPATQ14207 1427 aa21.49■■□□□ 1.03
PMS1-212ENST00000432292 GSE1Q14687 1217 aa21.48■■□□□ 1.03
PMS1-212ENST00000432292 CEP152O94986 1710 aa21.48■■□□□ 1.03
PMS1-212ENST00000432292 NOS1P29475 1434 aa21.48■■□□□ 1.03
PMS1-212ENST00000432292 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
PMS1-212ENST00000432292 SMG6Q86US8 1419 aaKnown RBP21.48■■□□□ 1.03
PMS1-212ENST00000432292 PPRC1Q5VV67 1664 aaKnown RBP21.47■■□□□ 1.03
PMS1-212ENST00000432292 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
PMS1-212ENST00000432292 EFCAB6Q5THR3 1501 aa21.47■■□□□ 1.03
PMS1-212ENST00000432292 MLH3Q9UHC1 1453 aa21.45■■□□□ 1.03
PMS1-212ENST00000432292 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
PMS1-212ENST00000432292 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
PMS1-212ENST00000432292 FRMPD1Q5SYB0 1578 aa21.45■■□□□ 1.02
PMS1-212ENST00000432292 YEATS2Q9ULM3 1422 aa21.44■■□□□ 1.02
PMS1-212ENST00000432292 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
PMS1-212ENST00000432292 LRPPRCP42704 1394 aaKnown RBP21.43■■□□□ 1.02
PMS1-212ENST00000432292 LAMC1P11047 1609 aa21.43■■□□□ 1.02
PMS1-212ENST00000432292 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
PMS1-212ENST00000432292 RNF17Q9BXT8 1623 aaKnown RBP21.42■■□□□ 1.02
PMS1-212ENST00000432292 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
PMS1-212ENST00000432292 CDCA7LQ96GN5 454 aa21.41■■□□□ 1.02
PMS1-212ENST00000432292 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
PMS1-212ENST00000432292 MLECQ14165 292 aa21.4■■□□□ 1.02
PMS1-212ENST00000432292 NFKBIBQ15653 356 aa21.4■■□□□ 1.02
PMS1-212ENST00000432292 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
PMS1-212ENST00000432292 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
PMS1-212ENST00000432292 EIF3AQ14152 1382 aaKnown RBP21.4■■□□□ 1.02
PMS1-212ENST00000432292 IDI1Q13907 227 aa21.39■■□□□ 1.02
PMS1-212ENST00000432292 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.02
PMS1-212ENST00000432292 RNF123Q5XPI4 1314 aa21.39■■□□□ 1.01
PMS1-212ENST00000432292 KIF1BO60333 1816 aa21.38■■□□□ 1.01
PMS1-212ENST00000432292 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
PMS1-212ENST00000432292 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
PMS1-212ENST00000432292 ADAMTS8Q9UP79 889 aa21.38■■□□□ 1.01
PMS1-212ENST00000432292 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
PMS1-212ENST00000432292 NEO1Q92859 1461 aa21.37■■□□□ 1.01
PMS1-212ENST00000432292 STK26Q9P289 416 aa21.37■■□□□ 1.01
PMS1-212ENST00000432292 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
PMS1-212ENST00000432292 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
PMS1-212ENST00000432292 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
PMS1-212ENST00000432292 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
PMS1-212ENST00000432292 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
PMS1-212ENST00000432292 MAP3K4Q9Y6R4 1608 aa21.35■■□□□ 1.01
PMS1-212ENST00000432292 ABCC3O15438 1527 aa21.34■■□□□ 1.01
PMS1-212ENST00000432292 CARD14Q9BXL6 1004 aa21.34■■□□□ 1.01
PMS1-212ENST00000432292 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
PMS1-212ENST00000432292 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1.01
PMS1-212ENST00000432292 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
PMS1-212ENST00000432292 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
PMS1-212ENST00000432292 RRP1P56182 461 aaKnown RBP21.31■■□□□ 1
PMS1-212ENST00000432292 TSPOAP1O95153 1857 aa21.31■■□□□ 1
PMS1-212ENST00000432292 MYOM2P54296 1465 aa21.3■■□□□ 1
PMS1-212ENST00000432292 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
PMS1-212ENST00000432292 DIP2CQ9Y2E4 1556 aa21.3■■□□□ 1
PMS1-212ENST00000432292 ERVK-7P63135 1459 aa21.29■■□□□ 1
PMS1-212ENST00000432292 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
PMS1-212ENST00000432292 PKNOX2Q96KN3 472 aa21.28■■□□□ 1
PMS1-212ENST00000432292 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
PMS1-212ENST00000432292 ADGRB3O60242 1522 aa21.27■■□□□ 1
PMS1-212ENST00000432292 PLIN1O60240 522 aa21.27■■□□□ 1
PMS1-212ENST00000432292 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
PMS1-212ENST00000432292 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
PMS1-212ENST00000432292 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
PMS1-212ENST00000432292 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
PMS1-212ENST00000432292 RCAN3Q9UKA8 241 aa21.26■□□□□ 0.99
PMS1-212ENST00000432292 FRAT2O75474 233 aaPredicted RBP21.25■□□□□ 0.99
PMS1-212ENST00000432292 PIK3C2GO75747 1445 aa21.24■□□□□ 0.99
PMS1-212ENST00000432292 SIGLEC1Q9BZZ2 1709 aa21.24■□□□□ 0.99
PMS1-212ENST00000432292 RSPH6AQ9H0K4 717 aa21.23■□□□□ 0.99
PMS1-212ENST00000432292 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
PMS1-212ENST00000432292 RPGRIP1LQ68CZ1 1315 aa21.23■□□□□ 0.99
PMS1-212ENST00000432292 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
PMS1-212ENST00000432292 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms