RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 MYO5CQ9NQX4 1742 aa14.89□□□□□ -0.03
CLDN4-202ENST00000431918 SMG6Q86US8 1419 aaKnown RBP14.89□□□□□ -0.03
CLDN4-202ENST00000431918 EIF5BO60841 1220 aaKnown RBP14.89□□□□□ -0.03
CLDN4-202ENST00000431918 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
CLDN4-202ENST00000431918 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLDN4-202ENST00000431918 RGS3P49796 1198 aa14.89□□□□□ -0.03
CLDN4-202ENST00000431918 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
CLDN4-202ENST00000431918 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
CLDN4-202ENST00000431918 RTL5Q5HYW3 569 aaPredicted RBP14.88□□□□□ -0.03
CLDN4-202ENST00000431918 PLA2R1Q13018 1463 aa14.88□□□□□ -0.03
CLDN4-202ENST00000431918 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
CLDN4-202ENST00000431918 CRBNQ96SW2 442 aa14.87□□□□□ -0.03
CLDN4-202ENST00000431918 CROCC2H7BZ55 1655 aa14.87□□□□□ -0.03
CLDN4-202ENST00000431918 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
CLDN4-202ENST00000431918 CFAP65Q6ZU64 1925 aaKnown RBP14.85□□□□□ -0.03
CLDN4-202ENST00000431918 ZCCHC11Q5TAX3 1644 aaKnown RBP14.85□□□□□ -0.03
CLDN4-202ENST00000431918 KDM5CP41229 1560 aa14.85□□□□□ -0.03
CLDN4-202ENST00000431918 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
CLDN4-202ENST00000431918 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
CLDN4-202ENST00000431918 BCORL1Q5H9F3 1711 aa14.84□□□□□ -0.03
CLDN4-202ENST00000431918 EVC2Q86UK5 1308 aa14.84□□□□□ -0.03
CLDN4-202ENST00000431918 LAS1LQ9Y4W2 734 aaKnown RBP14.83□□□□□ -0.03
CLDN4-202ENST00000431918 NOS1P29475 1434 aa14.83□□□□□ -0.04
CLDN4-202ENST00000431918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
CLDN4-202ENST00000431918 MAPK8IP3Q9UPT6 1336 aa14.83□□□□□ -0.04
CLDN4-202ENST00000431918 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
CLDN4-202ENST00000431918 NUTM2FA1L443 756 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 SOX12O15370 315 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 BCL2L13Q9BXK5 485 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 MAST1Q9Y2H9 1570 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 IDI1Q13907 227 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 PARD3Q8TEW0 1356 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 GGNBP2Q9H3C7 697 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 CGNL1Q0VF96 1302 aa14.81□□□□□ -0.04
CLDN4-202ENST00000431918 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
CLDN4-202ENST00000431918 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
CLDN4-202ENST00000431918 ATP7AQ04656 1500 aa14.8□□□□□ -0.04
CLDN4-202ENST00000431918 MTHFSP49914 203 aa14.8□□□□□ -0.04
CLDN4-202ENST00000431918 ABCC1P33527 1531 aa14.79□□□□□ -0.04
CLDN4-202ENST00000431918 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
CLDN4-202ENST00000431918 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
CLDN4-202ENST00000431918 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
CLDN4-202ENST00000431918 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
CLDN4-202ENST00000431918 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
CLDN4-202ENST00000431918 COL17A1Q9UMD9 1497 aaPredicted RBP14.78□□□□□ -0.04
CLDN4-202ENST00000431918 GPRASP1Q5JY77 1395 aa14.78□□□□□ -0.04
CLDN4-202ENST00000431918 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.04
CLDN4-202ENST00000431918 PRAM1Q96QH2 718 aa14.77□□□□□ -0.04
CLDN4-202ENST00000431918 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.04
CLDN4-202ENST00000431918 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.05
CLDN4-202ENST00000431918 SKAP1Q86WV1 359 aa14.76□□□□□ -0.05
CLDN4-202ENST00000431918 ATP10AO60312 1499 aa14.76□□□□□ -0.05
CLDN4-202ENST00000431918 FTSJ3Q8IY81 847 aaKnown RBP14.75□□□□□ -0.05
CLDN4-202ENST00000431918 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
CLDN4-202ENST00000431918 C20orf194Q5TEA3 1177 aa14.74□□□□□ -0.05
CLDN4-202ENST00000431918 NSD3Q9BZ95 1437 aa14.74□□□□□ -0.05
CLDN4-202ENST00000431918 E9PSI1 815 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 CARD14Q9BXL6 1004 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 C14orf93Q9H972 538 aaKnown RBP14.73□□□□□ -0.05
CLDN4-202ENST00000431918 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
CLDN4-202ENST00000431918 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
CLDN4-202ENST00000431918 SLC52A1Q9NWF4 448 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 TCP11L2Q8N4U5 519 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 BCAR3O75815 825 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 COG6Q9Y2V7 657 aa14.73□□□□□ -0.05
CLDN4-202ENST00000431918 LRPPRCP42704 1394 aaKnown RBP14.72□□□□□ -0.05
CLDN4-202ENST00000431918 EIF2AK4Q9P2K8 1649 aaKnown RBP14.72□□□□□ -0.05
CLDN4-202ENST00000431918 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
CLDN4-202ENST00000431918 SHROOM2Q13796 1616 aa14.71□□□□□ -0.05
CLDN4-202ENST00000431918 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.06
CLDN4-202ENST00000431918 RPGRIP1LQ68CZ1 1315 aa14.7□□□□□ -0.06
CLDN4-202ENST00000431918 FANCIQ9NVI1 1328 aa14.7□□□□□ -0.06
CLDN4-202ENST00000431918 PDE4AP27815 886 aa14.7□□□□□ -0.06
CLDN4-202ENST00000431918 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
CLDN4-202ENST00000431918 RUNDC1Q96C34 613 aa14.7□□□□□ -0.06
CLDN4-202ENST00000431918 ZFYVE16Q7Z3T8 1539 aa14.69□□□□□ -0.06
CLDN4-202ENST00000431918 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
CLDN4-202ENST00000431918 MSH5O43196 834 aa14.68□□□□□ -0.06
CLDN4-202ENST00000431918 WAPLQ7Z5K2 1190 aa14.68□□□□□ -0.06
CLDN4-202ENST00000431918 PANK1Q8TE04 598 aa14.68□□□□□ -0.06
CLDN4-202ENST00000431918 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
CLDN4-202ENST00000431918 UNC13BO14795 1591 aa14.68□□□□□ -0.06
CLDN4-202ENST00000431918 ZBTB7CA1YPR0 619 aa14.67□□□□□ -0.06
CLDN4-202ENST00000431918 MAGI2Q86UL8 1455 aa14.67□□□□□ -0.06
CLDN4-202ENST00000431918 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
CLDN4-202ENST00000431918 DUSP27Q5VZP5 1158 aa14.67□□□□□ -0.06
CLDN4-202ENST00000431918 MYH16Q9H6N6 1097 aa14.67□□□□□ -0.06
CLDN4-202ENST00000431918 CDK19Q9BWU1 502 aa14.67□□□□□ -0.06
CLDN4-202ENST00000431918 TXNDC2Q86VQ3 553 aa14.66□□□□□ -0.06
CLDN4-202ENST00000431918 SLFN5Q08AF3 891 aa14.66□□□□□ -0.06
CLDN4-202ENST00000431918 UBE2Q2Q8WVN8 375 aa14.66□□□□□ -0.06
CLDN4-202ENST00000431918 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
CLDN4-202ENST00000431918 NPATQ14207 1427 aa14.65□□□□□ -0.06
CLDN4-202ENST00000431918 PLEKHH1Q9ULM0 1364 aa14.65□□□□□ -0.06
CLDN4-202ENST00000431918 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
CLDN4-202ENST00000431918 ASXL1Q8IXJ9 1541 aa14.65□□□□□ -0.06
CLDN4-202ENST00000431918 IPO9Q96P70 1041 aaKnown RBP14.65□□□□□ -0.06
CLDN4-202ENST00000431918 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
CLDN4-202ENST00000431918 HMOX1P09601 288 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms