RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ARHGAP23Q9P227 1491 aa14.64□□□□□ -0.07
CDC42-IT1-201ENST00000431803 KANK1Q14678 1352 aa14.64□□□□□ -0.07
CDC42-IT1-201ENST00000431803 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
CDC42-IT1-201ENST00000431803 SLIT1O75093 1534 aa14.64□□□□□ -0.07
CDC42-IT1-201ENST00000431803 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
CDC42-IT1-201ENST00000431803 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
CDC42-IT1-201ENST00000431803 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
CDC42-IT1-201ENST00000431803 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
CDC42-IT1-201ENST00000431803 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
CDC42-IT1-201ENST00000431803 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
CDC42-IT1-201ENST00000431803 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
CDC42-IT1-201ENST00000431803 STRCP1A6NGW2 1772 aa14.6□□□□□ -0.07
CDC42-IT1-201ENST00000431803 SYNMO15061 1565 aa14.6□□□□□ -0.07
CDC42-IT1-201ENST00000431803 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
CDC42-IT1-201ENST00000431803 NOS1P29475 1434 aa14.59□□□□□ -0.07
CDC42-IT1-201ENST00000431803 FAM50AQ14320 339 aaKnown RBP14.59□□□□□ -0.07
CDC42-IT1-201ENST00000431803 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.07
CDC42-IT1-201ENST00000431803 LTKP29376 864 aa14.58□□□□□ -0.08
CDC42-IT1-201ENST00000431803 ALKQ9UM73 1620 aa14.58□□□□□ -0.08
CDC42-IT1-201ENST00000431803 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
CDC42-IT1-201ENST00000431803 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
CDC42-IT1-201ENST00000431803 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
CDC42-IT1-201ENST00000431803 TOM1O60784 492 aa14.55□□□□□ -0.08
CDC42-IT1-201ENST00000431803 IDI1Q13907 227 aa14.55□□□□□ -0.08
CDC42-IT1-201ENST00000431803 POTEHQ6S545 545 aa14.55□□□□□ -0.08
CDC42-IT1-201ENST00000431803 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
CDC42-IT1-201ENST00000431803 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
CDC42-IT1-201ENST00000431803 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
CDC42-IT1-201ENST00000431803 UNC13BO14795 1591 aa14.54□□□□□ -0.08
CDC42-IT1-201ENST00000431803 TET3O43151 1660 aa14.53□□□□□ -0.08
CDC42-IT1-201ENST00000431803 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
CDC42-IT1-201ENST00000431803 ILDR2Q71H61 639 aa14.53□□□□□ -0.08
CDC42-IT1-201ENST00000431803 EID1Q9Y6B2 187 aa14.53□□□□□ -0.08
CDC42-IT1-201ENST00000431803 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
CDC42-IT1-201ENST00000431803 HSPA1LP34931 641 aa14.51□□□□□ -0.09
CDC42-IT1-201ENST00000431803 SLC52A1Q9NWF4 448 aa14.51□□□□□ -0.09
CDC42-IT1-201ENST00000431803 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
CDC42-IT1-201ENST00000431803 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
CDC42-IT1-201ENST00000431803 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
CDC42-IT1-201ENST00000431803 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
CDC42-IT1-201ENST00000431803 IQGAP3Q86VI3 1631 aa14.48□□□□□ -0.09
CDC42-IT1-201ENST00000431803 E9PCH4 1651 aa14.46□□□□□ -0.09
CDC42-IT1-201ENST00000431803 TMEM131LA2VDJ0 1609 aa14.46□□□□□ -0.09
CDC42-IT1-201ENST00000431803 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
CDC42-IT1-201ENST00000431803 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
CDC42-IT1-201ENST00000431803 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
CDC42-IT1-201ENST00000431803 MYO5BQ9ULV0 1848 aa14.44□□□□□ -0.1
CDC42-IT1-201ENST00000431803 SOCS7O14512 581 aa14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 KCNA6P17658 529 aa14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
CDC42-IT1-201ENST00000431803 RIMS2Q9UQ26 1411 aa14.42□□□□□ -0.1
CDC42-IT1-201ENST00000431803 CLEC11AQ9Y240 323 aa14.42□□□□□ -0.1
CDC42-IT1-201ENST00000431803 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
CDC42-IT1-201ENST00000431803 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
CDC42-IT1-201ENST00000431803 NUP155O75694 1391 aa14.41□□□□□ -0.1
CDC42-IT1-201ENST00000431803 ITGAEP38570 1179 aa14.4□□□□□ -0.1
CDC42-IT1-201ENST00000431803 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
CDC42-IT1-201ENST00000431803 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
CDC42-IT1-201ENST00000431803 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
CDC42-IT1-201ENST00000431803 CHD2O14647 1828 aaKnown RBP14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 PPP1R15AO75807 674 aaPredicted RBP14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDC42-IT1-201ENST00000431803 BCANQ96GW7 911 aa14.35□□□□□ -0.11
CDC42-IT1-201ENST00000431803 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
CDC42-IT1-201ENST00000431803 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
CDC42-IT1-201ENST00000431803 PIP4P2Q8N4L2 257 aa14.34□□□□□ -0.11
CDC42-IT1-201ENST00000431803 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
CDC42-IT1-201ENST00000431803 NAIPQ13075 1403 aa14.33□□□□□ -0.11
CDC42-IT1-201ENST00000431803 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
CDC42-IT1-201ENST00000431803 PIK3R4Q99570 1358 aa14.33□□□□□ -0.12
CDC42-IT1-201ENST00000431803 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.12
CDC42-IT1-201ENST00000431803 MSH6P52701 1360 aa14.32□□□□□ -0.12
CDC42-IT1-201ENST00000431803 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
CDC42-IT1-201ENST00000431803 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDC42-IT1-201ENST00000431803 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
CDC42-IT1-201ENST00000431803 TRPM2O94759 1503 aa14.3□□□□□ -0.12
CDC42-IT1-201ENST00000431803 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
CDC42-IT1-201ENST00000431803 NRXN3Q9Y4C0 1643 aa14.3□□□□□ -0.12
CDC42-IT1-201ENST00000431803 HFM1A2PYH4 1435 aa14.29□□□□□ -0.12
CDC42-IT1-201ENST00000431803 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
CDC42-IT1-201ENST00000431803 PTPRUQ92729 1446 aa14.27□□□□□ -0.12
CDC42-IT1-201ENST00000431803 SLAIN2Q9P270 581 aa14.27□□□□□ -0.13
CDC42-IT1-201ENST00000431803 XRN1Q8IZH2 1706 aaKnown RBP14.26□□□□□ -0.13
CDC42-IT1-201ENST00000431803 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
CDC42-IT1-201ENST00000431803 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
CDC42-IT1-201ENST00000431803 C19orf44Q9H6X5 657 aa14.23□□□□□ -0.13
CDC42-IT1-201ENST00000431803 RGS17Q9UGC6 210 aaPredicted RBP14.23□□□□□ -0.13
CDC42-IT1-201ENST00000431803 AMOTL2Q9Y2J4 779 aa14.23□□□□□ -0.13
CDC42-IT1-201ENST00000431803 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
CDC42-IT1-201ENST00000431803 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
CDC42-IT1-201ENST00000431803 DCCP43146 1447 aa14.22□□□□□ -0.13
CDC42-IT1-201ENST00000431803 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
CDC42-IT1-201ENST00000431803 METP08581 1390 aa14.22□□□□□ -0.13
CDC42-IT1-201ENST00000431803 KIF1BO60333 1816 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms