RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ANP32EQ9BTT0 268 aa15.24■□□□□ 0.03
SMPD4-205ENST00000431183 FBLN1P23142 703 aa15.24■□□□□ 0.03
SMPD4-205ENST00000431183 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
SMPD4-205ENST00000431183 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-205ENST00000431183 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
SMPD4-205ENST00000431183 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
SMPD4-205ENST00000431183 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
SMPD4-205ENST00000431183 CEP152O94986 1710 aa15.21■□□□□ 0.03
SMPD4-205ENST00000431183 SPATA31E1Q6ZUB1 1445 aa15.21■□□□□ 0.03
SMPD4-205ENST00000431183 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
SMPD4-205ENST00000431183 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.03
SMPD4-205ENST00000431183 E9PCH4 1651 aa15.21■□□□□ 0.02
SMPD4-205ENST00000431183 HSPA2P54652 639 aa15.2■□□□□ 0.02
SMPD4-205ENST00000431183 FKBP8Q14318 412 aa15.2■□□□□ 0.02
SMPD4-205ENST00000431183 FRMPD1Q5SYB0 1578 aa15.2■□□□□ 0.02
SMPD4-205ENST00000431183 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
SMPD4-205ENST00000431183 C14orf93Q9H972 538 aaKnown RBP15.19■□□□□ 0.02
SMPD4-205ENST00000431183 GGNBP2Q9H3C7 697 aa15.19■□□□□ 0.02
SMPD4-205ENST00000431183 LTKP29376 864 aa15.19■□□□□ 0.02
SMPD4-205ENST00000431183 NEFLP07196 543 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 CLTCL1P53675 1640 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 ABCC3O15438 1527 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 UNC13BO14795 1591 aa15.18■□□□□ 0.02
SMPD4-205ENST00000431183 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
SMPD4-205ENST00000431183 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
SMPD4-205ENST00000431183 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
SMPD4-205ENST00000431183 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
SMPD4-205ENST00000431183 KDM5DQ9BY66 1539 aa15.16■□□□□ 0.02
SMPD4-205ENST00000431183 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
SMPD4-205ENST00000431183 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
SMPD4-205ENST00000431183 KTN1Q86UP2 1357 aaKnown RBP15.16■□□□□ 0.02
SMPD4-205ENST00000431183 CCER2I3L3R5 266 aa15.16■□□□□ 0.02
SMPD4-205ENST00000431183 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMPD4-205ENST00000431183 TNRQ92752 1358 aa15.15■□□□□ 0.02
SMPD4-205ENST00000431183 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
SMPD4-205ENST00000431183 CDK19Q9BWU1 502 aa15.15■□□□□ 0.02
SMPD4-205ENST00000431183 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
SMPD4-205ENST00000431183 MAP3K4Q9Y6R4 1608 aa15.14■□□□□ 0.01
SMPD4-205ENST00000431183 KDM5CP41229 1560 aa15.14■□□□□ 0.01
SMPD4-205ENST00000431183 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
SMPD4-205ENST00000431183 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
SMPD4-205ENST00000431183 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
SMPD4-205ENST00000431183 PTPRTO14522 1441 aa15.14■□□□□ 0.01
SMPD4-205ENST00000431183 EFCAB6Q5THR3 1501 aa15.13■□□□□ 0.01
SMPD4-205ENST00000431183 UHRF1BP1Q6BDS2 1440 aa15.12■□□□□ 0.01
SMPD4-205ENST00000431183 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
SMPD4-205ENST00000431183 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
SMPD4-205ENST00000431183 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-205ENST00000431183 TRPM2O94759 1503 aa15.1■□□□□ 0.01
SMPD4-205ENST00000431183 CARD14Q9BXL6 1004 aa15.1■□□□□ 0.01
SMPD4-205ENST00000431183 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
SMPD4-205ENST00000431183 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
SMPD4-205ENST00000431183 THEMISQ8N1K5 641 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-205ENST00000431183 MROH1Q8NDA8 1641 aa15.09■□□□□ 0.01
SMPD4-205ENST00000431183 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
SMPD4-205ENST00000431183 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
SMPD4-205ENST00000431183 TET3O43151 1660 aa15.09■□□□□ 0.01
SMPD4-205ENST00000431183 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
SMPD4-205ENST00000431183 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0.01
SMPD4-205ENST00000431183 AMOTL2Q9Y2J4 779 aa15.08■□□□□ 0
SMPD4-205ENST00000431183 RNF17Q9BXT8 1623 aaKnown RBP15.08■□□□□ 0
SMPD4-205ENST00000431183 SLC24A1O60721 1099 aa15.08■□□□□ 0
SMPD4-205ENST00000431183 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
SMPD4-205ENST00000431183 RICTORQ6R327 1708 aa15.08■□□□□ 0
SMPD4-205ENST00000431183 PRKCSHP14314 528 aaPredicted RBP15.07■□□□□ 0
SMPD4-205ENST00000431183 NLRP13Q86W25 1043 aa15.07■□□□□ 0
SMPD4-205ENST00000431183 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
SMPD4-205ENST00000431183 GLI2P10070 1586 aa15.06■□□□□ 0
SMPD4-205ENST00000431183 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.06■□□□□ 0
SMPD4-205ENST00000431183 SPHKAPQ2M3C7 1700 aa15.06■□□□□ 0
SMPD4-205ENST00000431183 NGDNQ8NEJ9 315 aaKnown RBP15.06■□□□□ 0
SMPD4-205ENST00000431183 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
SMPD4-205ENST00000431183 METP08581 1390 aa15.05■□□□□ 0
SMPD4-205ENST00000431183 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
SMPD4-205ENST00000431183 RALBP1Q15311 655 aa15.05■□□□□ -0
SMPD4-205ENST00000431183 KIF13AQ9H1H9 1805 aa15.05■□□□□ -0
SMPD4-205ENST00000431183 ERVK-7P63135 1459 aa15.04■□□□□ -0
SMPD4-205ENST00000431183 PPP2R1AP30153 589 aa15.04■□□□□ -0
SMPD4-205ENST00000431183 HDGFL2Q7Z4V5 671 aaPredicted RBP15.04■□□□□ -0
SMPD4-205ENST00000431183 STAC3Q96MF2 364 aa15.04■□□□□ -0
SMPD4-205ENST00000431183 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
SMPD4-205ENST00000431183 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
SMPD4-205ENST00000431183 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
SMPD4-205ENST00000431183 MTHFSP49914 203 aa15.03■□□□□ -0
SMPD4-205ENST00000431183 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
SMPD4-205ENST00000431183 KCNA6P17658 529 aa15.03■□□□□ -0
SMPD4-205ENST00000431183 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
SMPD4-205ENST00000431183 ANKLE2Q86XL3 938 aa15.02□□□□□ -0.01
SMPD4-205ENST00000431183 PNISRQ8TF01 805 aaKnown RBP15.02□□□□□ -0.01
SMPD4-205ENST00000431183 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
SMPD4-205ENST00000431183 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
SMPD4-205ENST00000431183 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
SMPD4-205ENST00000431183 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
SMPD4-205ENST00000431183 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
SMPD4-205ENST00000431183 NME9Q86XW9 330 aa15□□□□□ -0.01
SMPD4-205ENST00000431183 GPRASP1Q5JY77 1395 aa15□□□□□ -0.01
SMPD4-205ENST00000431183 APAF1O14727 1248 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms