RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
RPE-206ENST00000429921 MROH2AA6NES4 1674 aa13.77□□□□□ -0.2
RPE-206ENST00000429921 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.2
RPE-206ENST00000429921 NEFLP07196 543 aa13.77□□□□□ -0.21
RPE-206ENST00000429921 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
RPE-206ENST00000429921 NOS1P29475 1434 aa13.77□□□□□ -0.21
RPE-206ENST00000429921 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
RPE-206ENST00000429921 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
RPE-206ENST00000429921 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
RPE-206ENST00000429921 CFAP74Q9C0B2 1584 aa13.75□□□□□ -0.21
RPE-206ENST00000429921 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
RPE-206ENST00000429921 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
RPE-206ENST00000429921 SAFB2Q14151 953 aaKnown RBP eCLIP13.74□□□□□ -0.21
RPE-206ENST00000429921 NEO1Q92859 1461 aa13.74□□□□□ -0.21
RPE-206ENST00000429921 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
RPE-206ENST00000429921 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
RPE-206ENST00000429921 KIF1BO60333 1816 aa13.73□□□□□ -0.21
RPE-206ENST00000429921 IDI1Q13907 227 aa13.72□□□□□ -0.21
RPE-206ENST00000429921 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
RPE-206ENST00000429921 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
RPE-206ENST00000429921 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
RPE-206ENST00000429921 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
RPE-206ENST00000429921 ABCC3O15438 1527 aa13.71□□□□□ -0.21
RPE-206ENST00000429921 STK26Q9P289 416 aa13.71□□□□□ -0.21
RPE-206ENST00000429921 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
RPE-206ENST00000429921 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
RPE-206ENST00000429921 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
RPE-206ENST00000429921 RALBP1Q15311 655 aa13.69□□□□□ -0.22
RPE-206ENST00000429921 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
RPE-206ENST00000429921 IQGAP1P46940 1657 aa13.68□□□□□ -0.22
RPE-206ENST00000429921 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
RPE-206ENST00000429921 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
RPE-206ENST00000429921 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
RPE-206ENST00000429921 LAMC1P11047 1609 aa13.68□□□□□ -0.22
RPE-206ENST00000429921 CAMSAP1Q5T5Y3 1602 aa13.67□□□□□ -0.22
RPE-206ENST00000429921 LMTK2Q8IWU2 1503 aa13.67□□□□□ -0.22
RPE-206ENST00000429921 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
RPE-206ENST00000429921 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
RPE-206ENST00000429921 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
RPE-206ENST00000429921 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
RPE-206ENST00000429921 SYNMO15061 1565 aa13.64□□□□□ -0.23
RPE-206ENST00000429921 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
RPE-206ENST00000429921 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
RPE-206ENST00000429921 C14orf93Q9H972 538 aaKnown RBP13.64□□□□□ -0.23
RPE-206ENST00000429921 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
RPE-206ENST00000429921 KCNA4P22459 653 aa13.63□□□□□ -0.23
RPE-206ENST00000429921 CARD14Q9BXL6 1004 aa13.63□□□□□ -0.23
RPE-206ENST00000429921 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
RPE-206ENST00000429921 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
RPE-206ENST00000429921 IFT172Q9UG01 1749 aa13.62□□□□□ -0.23
RPE-206ENST00000429921 EIF3AQ14152 1382 aaKnown RBP13.62□□□□□ -0.23
RPE-206ENST00000429921 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
RPE-206ENST00000429921 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
RPE-206ENST00000429921 MYOM2P54296 1465 aa13.62□□□□□ -0.23
RPE-206ENST00000429921 GLI2P10070 1586 aa13.62□□□□□ -0.23
RPE-206ENST00000429921 PPP2R1AP30153 589 aa13.61□□□□□ -0.23
RPE-206ENST00000429921 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
RPE-206ENST00000429921 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
RPE-206ENST00000429921 ERVK-7P63135 1459 aa13.61□□□□□ -0.23
RPE-206ENST00000429921 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
RPE-206ENST00000429921 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
RPE-206ENST00000429921 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
RPE-206ENST00000429921 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
RPE-206ENST00000429921 PPLO60437 1756 aa13.6□□□□□ -0.23
RPE-206ENST00000429921 PIK3C2GO75747 1445 aa13.59□□□□□ -0.23
RPE-206ENST00000429921 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
RPE-206ENST00000429921 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
RPE-206ENST00000429921 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
RPE-206ENST00000429921 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
RPE-206ENST00000429921 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.23
RPE-206ENST00000429921 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
RPE-206ENST00000429921 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
RPE-206ENST00000429921 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
RPE-206ENST00000429921 MYOM1P52179 1685 aa13.57□□□□□ -0.24
RPE-206ENST00000429921 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
RPE-206ENST00000429921 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
RPE-206ENST00000429921 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
RPE-206ENST00000429921 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
RPE-206ENST00000429921 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
RPE-206ENST00000429921 KDM5AP29375 1690 aaKnown RBP13.55□□□□□ -0.24
RPE-206ENST00000429921 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
RPE-206ENST00000429921 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
RPE-206ENST00000429921 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
RPE-206ENST00000429921 PREX1Q8TCU6 1659 aa13.54□□□□□ -0.24
RPE-206ENST00000429921 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
RPE-206ENST00000429921 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
RPE-206ENST00000429921 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
RPE-206ENST00000429921 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
RPE-206ENST00000429921 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPE-206ENST00000429921 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
RPE-206ENST00000429921 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
RPE-206ENST00000429921 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.24
RPE-206ENST00000429921 POGKQ9P215 609 aa13.52□□□□□ -0.24
RPE-206ENST00000429921 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.24
RPE-206ENST00000429921 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
RPE-206ENST00000429921 ASXL1Q8IXJ9 1541 aa13.52□□□□□ -0.25
RPE-206ENST00000429921 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.25
RPE-206ENST00000429921 PELP1Q8IZL8 1130 aaKnown RBP13.52□□□□□ -0.25
RPE-206ENST00000429921 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
RPE-206ENST00000429921 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms