RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
NUP98-207ENST00000429801 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
NUP98-207ENST00000429801 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
NUP98-207ENST00000429801 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
NUP98-207ENST00000429801 PDE4CQ08493 712 aa12.17□□□□□ -0.46
NUP98-207ENST00000429801 KIF1BO60333 1816 aa12.17□□□□□ -0.46
NUP98-207ENST00000429801 PIK3C2BO00750 1634 aa12.17□□□□□ -0.46
NUP98-207ENST00000429801 DCAF11Q8TEB1 546 aa12.16□□□□□ -0.46
NUP98-207ENST00000429801 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
NUP98-207ENST00000429801 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
NUP98-207ENST00000429801 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
NUP98-207ENST00000429801 IDI1Q13907 227 aa12.15□□□□□ -0.46
NUP98-207ENST00000429801 ADAMTSL3P82987 1691 aa12.14□□□□□ -0.47
NUP98-207ENST00000429801 MADDQ8WXG6 1647 aa12.14□□□□□ -0.47
NUP98-207ENST00000429801 ADGRB3O60242 1522 aa12.14□□□□□ -0.47
NUP98-207ENST00000429801 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
NUP98-207ENST00000429801 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
NUP98-207ENST00000429801 TNRQ92752 1358 aa12.13□□□□□ -0.47
NUP98-207ENST00000429801 C3P01024 1663 aa12.13□□□□□ -0.47
NUP98-207ENST00000429801 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
NUP98-207ENST00000429801 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
NUP98-207ENST00000429801 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
NUP98-207ENST00000429801 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
NUP98-207ENST00000429801 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
NUP98-207ENST00000429801 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
NUP98-207ENST00000429801 NEFLP07196 543 aa12.11□□□□□ -0.47
NUP98-207ENST00000429801 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
NUP98-207ENST00000429801 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
NUP98-207ENST00000429801 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
NUP98-207ENST00000429801 NBPF8Q3BBV2 869 aa12.11□□□□□ -0.47
NUP98-207ENST00000429801 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
NUP98-207ENST00000429801 TMEM131LA2VDJ0 1609 aa12.09□□□□□ -0.47
NUP98-207ENST00000429801 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
NUP98-207ENST00000429801 PRAG1Q86YV5 1406 aa12.09□□□□□ -0.47
NUP98-207ENST00000429801 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
NUP98-207ENST00000429801 MYOM2P54296 1465 aa12.08□□□□□ -0.48
NUP98-207ENST00000429801 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
NUP98-207ENST00000429801 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
NUP98-207ENST00000429801 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
NUP98-207ENST00000429801 FGD1P98174 961 aa12.06□□□□□ -0.48
NUP98-207ENST00000429801 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
NUP98-207ENST00000429801 ZMYND15Q9H091 742 aa12.06□□□□□ -0.48
NUP98-207ENST00000429801 PPLO60437 1756 aa12.06□□□□□ -0.48
NUP98-207ENST00000429801 RALGAPBQ86X10 1494 aa12.06□□□□□ -0.48
NUP98-207ENST00000429801 PTPRMP28827 1452 aa12.05□□□□□ -0.48
NUP98-207ENST00000429801 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
NUP98-207ENST00000429801 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
NUP98-207ENST00000429801 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
NUP98-207ENST00000429801 MYO5BQ9ULV0 1848 aa12.04□□□□□ -0.48
NUP98-207ENST00000429801 NRXN1Q9ULB1 1477 aa12.04□□□□□ -0.48
NUP98-207ENST00000429801 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
NUP98-207ENST00000429801 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
NUP98-207ENST00000429801 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
NUP98-207ENST00000429801 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
NUP98-207ENST00000429801 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.03□□□□□ -0.48
NUP98-207ENST00000429801 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
NUP98-207ENST00000429801 MYO3AQ8NEV4 1616 aa12.02□□□□□ -0.48
NUP98-207ENST00000429801 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.48
NUP98-207ENST00000429801 CARD11Q9BXL7 1154 aa12.02□□□□□ -0.48
NUP98-207ENST00000429801 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.49
NUP98-207ENST00000429801 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
NUP98-207ENST00000429801 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
NUP98-207ENST00000429801 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
NUP98-207ENST00000429801 KIAA1210Q9ULL0 1709 aa12.01□□□□□ -0.49
NUP98-207ENST00000429801 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
NUP98-207ENST00000429801 GPRASP1Q5JY77 1395 aa12.01□□□□□ -0.49
NUP98-207ENST00000429801 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
NUP98-207ENST00000429801 NBPF1Q3BBV0 1214 aa12□□□□□ -0.49
NUP98-207ENST00000429801 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
NUP98-207ENST00000429801 LAMC1P11047 1609 aa11.99□□□□□ -0.49
NUP98-207ENST00000429801 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
NUP98-207ENST00000429801 KDM4FA0A1W2PPD8 638 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
NUP98-207ENST00000429801 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 AAMPQ13685 434 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 MIER1Q8N108 512 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 USP47Q96K76 1375 aa11.98□□□□□ -0.49
NUP98-207ENST00000429801 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
NUP98-207ENST00000429801 SLIT1O75093 1534 aa11.97□□□□□ -0.49
NUP98-207ENST00000429801 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
NUP98-207ENST00000429801 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.49
NUP98-207ENST00000429801 ADRA2BP18089 450 aa11.96□□□□□ -0.5
NUP98-207ENST00000429801 RBM10P98175 930 aaKnown RBP11.95□□□□□ -0.5
NUP98-207ENST00000429801 TXNDC2Q86VQ3 553 aa11.95□□□□□ -0.5
NUP98-207ENST00000429801 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
NUP98-207ENST00000429801 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
NUP98-207ENST00000429801 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
NUP98-207ENST00000429801 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
NUP98-207ENST00000429801 LTKP29376 864 aa11.93□□□□□ -0.5
NUP98-207ENST00000429801 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
NUP98-207ENST00000429801 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
NUP98-207ENST00000429801 BCANQ96GW7 911 aa11.93□□□□□ -0.5
NUP98-207ENST00000429801 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
NUP98-207ENST00000429801 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
NUP98-207ENST00000429801 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
NUP98-207ENST00000429801 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
NUP98-207ENST00000429801 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
NUP98-207ENST00000429801 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
NUP98-207ENST00000429801 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms