RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 POLR1AO95602 1720 aaPredicted RBP30.91■■■□□ 2.54
VSX1-205ENST00000429762 KIF7Q2M1P5 1343 aa30.91■■■□□ 2.54
VSX1-205ENST00000429762 NUTM2DQ5VT03 806 aaPredicted RBP30.9■■■□□ 2.54
VSX1-205ENST00000429762 STAC3Q96MF2 364 aa30.9■■■□□ 2.54
VSX1-205ENST00000429762 SLC52A1Q9NWF4 448 aa30.89■■■□□ 2.54
VSX1-205ENST00000429762 ZMYM3Q14202 1370 aa30.88■■■□□ 2.53
VSX1-205ENST00000429762 SPATA31D1Q6ZQQ2 1576 aa30.88■■■□□ 2.53
VSX1-205ENST00000429762 TMEM131LA2VDJ0 1609 aa30.87■■■□□ 2.53
VSX1-205ENST00000429762 CFAP70Q5T0N1 1121 aa30.86■■■□□ 2.53
VSX1-205ENST00000429762 NRXN1Q9ULB1 1477 aa30.85■■■□□ 2.53
VSX1-205ENST00000429762 POLR3GLQ9BT43 218 aa30.85■■■□□ 2.53
VSX1-205ENST00000429762 NEXMIFQ5QGS0 1516 aa30.85■■■□□ 2.53
VSX1-205ENST00000429762 KIAA1210Q9ULL0 1709 aa30.83■■■□□ 2.53
VSX1-205ENST00000429762 IQGAP1P46940 1657 aa30.82■■■□□ 2.52
VSX1-205ENST00000429762 RPGRIP1LQ68CZ1 1315 aa30.81■■■□□ 2.52
VSX1-205ENST00000429762 SENP3Q9H4L4 574 aaPredicted RBP30.79■■■□□ 2.52
VSX1-205ENST00000429762 PIK3C2GO75747 1445 aa30.78■■■□□ 2.52
VSX1-205ENST00000429762 STAG3Q9UJ98 1225 aa30.76■■■□□ 2.51
VSX1-205ENST00000429762 FER1L4A9Z1Z3 1794 aa30.74■■■□□ 2.51
VSX1-205ENST00000429762 SCAF11Q99590 1463 aaKnown RBP30.74■■■□□ 2.51
VSX1-205ENST00000429762 PLPPR3Q6T4P5 718 aa30.74■■■□□ 2.51
VSX1-205ENST00000429762 CEBPAP49715 358 aaPredicted RBP30.73■■■□□ 2.51
VSX1-205ENST00000429762 TESK2Q96S53 571 aa30.71■■■□□ 2.51
VSX1-205ENST00000429762 TNRQ92752 1358 aa30.7■■■□□ 2.5
VSX1-205ENST00000429762 VGFO15240 615 aaPredicted RBP30.7■■■□□ 2.5
VSX1-205ENST00000429762 A2ML1A8K2U0 1454 aa30.69■■■□□ 2.5
VSX1-205ENST00000429762 ANP32CO43423 234 aa30.68■■■□□ 2.5
VSX1-205ENST00000429762 C3P01024 1663 aa30.68■■■□□ 2.5
VSX1-205ENST00000429762 C14orf93Q9H972 538 aaKnown RBP30.68■■■□□ 2.5
VSX1-205ENST00000429762 DISP3Q9P2K9 1392 aa30.67■■■□□ 2.5
VSX1-205ENST00000429762 YTHDC1Q96MU7 727 aaKnown RBP30.66■■■□□ 2.5
VSX1-205ENST00000429762 TMEM132EQ6IEE7 984 aa30.66■■■□□ 2.5
VSX1-205ENST00000429762 SETBP1Q9Y6X0 1596 aa30.65■■■□□ 2.5
VSX1-205ENST00000429762 ADGRB1O14514 1584 aa30.64■■■□□ 2.49
VSX1-205ENST00000429762 ZFYVE9O95405 1425 aa30.62■■■□□ 2.49
VSX1-205ENST00000429762 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
VSX1-205ENST00000429762 EIF3AQ14152 1382 aaKnown RBP30.6■■■□□ 2.49
VSX1-205ENST00000429762 TRAK1Q9UPV9 953 aa30.58■■■□□ 2.49
VSX1-205ENST00000429762 TMF1P82094 1093 aa30.57■■■□□ 2.48
VSX1-205ENST00000429762 RIMS1Q86UR5 1692 aaKnown RBP30.56■■■□□ 2.48
VSX1-205ENST00000429762 UBR1Q8IWV7 1749 aa30.55■■■□□ 2.48
VSX1-205ENST00000429762 ASXL1Q8IXJ9 1541 aa30.54■■■□□ 2.48
VSX1-205ENST00000429762 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
VSX1-205ENST00000429762 MYO3AQ8NEV4 1616 aa30.51■■■□□ 2.47
VSX1-205ENST00000429762 ALKQ9UM73 1620 aa30.49■■■□□ 2.47
VSX1-205ENST00000429762 STK26Q9P289 416 aa30.47■■■□□ 2.47
VSX1-205ENST00000429762 NLRP1Q9C000 1473 aa30.47■■■□□ 2.47
VSX1-205ENST00000429762 QRICH2Q9H0J4 1663 aa30.47■■■□□ 2.47
VSX1-205ENST00000429762 CENPJQ9HC77 1338 aaPredicted RBP30.46■■■□□ 2.47
VSX1-205ENST00000429762 KDM5AP29375 1690 aaKnown RBP30.46■■■□□ 2.47
VSX1-205ENST00000429762 ARHGEF28Q8N1W1 1705 aaKnown RBP30.46■■■□□ 2.47
VSX1-205ENST00000429762 ADAMTSL3P82987 1691 aa30.45■■■□□ 2.46
VSX1-205ENST00000429762 TMEM2Q9UHN6 1383 aa30.43■■■□□ 2.46
VSX1-205ENST00000429762 CCER2I3L3R5 266 aa30.43■■■□□ 2.46
VSX1-205ENST00000429762 PRKRIP1Q9H875 184 aaPredicted RBP30.43■■■□□ 2.46
VSX1-205ENST00000429762 PTPRMP28827 1452 aa30.42■■■□□ 2.46
VSX1-205ENST00000429762 NRXN3Q9Y4C0 1643 aa30.42■■■□□ 2.46
VSX1-205ENST00000429762 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.41■■■□□ 2.46
VSX1-205ENST00000429762 SETD1AO15047 1707 aaKnown RBP30.4■■■□□ 2.46
VSX1-205ENST00000429762 YTHDC2Q9H6S0 1430 aaKnown RBP30.38■■■□□ 2.45
VSX1-205ENST00000429762 SAFB2Q14151 953 aaKnown RBP eCLIP30.37■■■□□ 2.45
VSX1-205ENST00000429762 MYOM1P52179 1685 aa30.36■■■□□ 2.45
VSX1-205ENST00000429762 PANK3Q9H999 370 aa30.35■■■□□ 2.45
VSX1-205ENST00000429762 SBNO2Q9Y2G9 1366 aa30.34■■■□□ 2.45
VSX1-205ENST00000429762 CDCA8Q53HL2 280 aa30.34■■■□□ 2.45
VSX1-205ENST00000429762 BCANQ96GW7 911 aa30.34■■■□□ 2.45
VSX1-205ENST00000429762 LTKP29376 864 aa30.34■■■□□ 2.45
VSX1-205ENST00000429762 CCDC184Q52MB2 194 aa30.33■■■□□ 2.45
VSX1-205ENST00000429762 HDGFP51858 240 aaKnown RBP30.32■■■□□ 2.44
VSX1-205ENST00000429762 METP08581 1390 aa30.29■■■□□ 2.44
VSX1-205ENST00000429762 TXNDC2Q86VQ3 553 aa30.29■■■□□ 2.44
VSX1-205ENST00000429762 PRAM1Q96QH2 718 aa30.28■■■□□ 2.44
VSX1-205ENST00000429762 CEP170BQ9Y4F5 1589 aaPredicted RBP30.27■■■□□ 2.44
VSX1-205ENST00000429762 PER1O15534 1290 aaPredicted RBP30.27■■■□□ 2.44
VSX1-205ENST00000429762 TULP4Q9NRJ4 1543 aa30.27■■■□□ 2.44
VSX1-205ENST00000429762 SLIT1O75093 1534 aa30.26■■■□□ 2.43
VSX1-205ENST00000429762 ARHGAP23Q9P227 1491 aa30.25■■■□□ 2.43
VSX1-205ENST00000429762 SLC24A1O60721 1099 aa30.24■■■□□ 2.43
VSX1-205ENST00000429762 CENPBP07199 599 aaPredicted RBP30.24■■■□□ 2.43
VSX1-205ENST00000429762 POGKQ9P215 609 aa30.24■■■□□ 2.43
VSX1-205ENST00000429762 LRPPRCP42704 1394 aaKnown RBP30.24■■■□□ 2.43
VSX1-205ENST00000429762 MINK1Q8N4C8 1332 aaPredicted RBP30.23■■■□□ 2.43
VSX1-205ENST00000429762 ADAMTS13Q76LX8 1427 aa30.23■■■□□ 2.43
VSX1-205ENST00000429762 EID1Q9Y6B2 187 aa30.23■■■□□ 2.43
VSX1-205ENST00000429762 PLEKHG1Q9ULL1 1385 aa30.22■■■□□ 2.43
VSX1-205ENST00000429762 THEMISQ8N1K5 641 aaPredicted RBP30.22■■■□□ 2.43
VSX1-205ENST00000429762 PLEKHH1Q9ULM0 1364 aa30.2■■■□□ 2.43
VSX1-205ENST00000429762 WAPLQ7Z5K2 1190 aa30.2■■■□□ 2.43
VSX1-205ENST00000429762 CC2D1BQ5T0F9 858 aaKnown RBP30.19■■■□□ 2.42
VSX1-205ENST00000429762 EVC2Q86UK5 1308 aa30.18■■■□□ 2.42
VSX1-205ENST00000429762 MRS2Q9HD23 443 aa30.18■■■□□ 2.42
VSX1-205ENST00000429762 DLC1Q96QB1 1528 aa30.18■■■□□ 2.42
VSX1-205ENST00000429762 SLC26A8Q96RN1 970 aa30.17■■■□□ 2.42
VSX1-205ENST00000429762 CABP2Q9NPB3 220 aa30.17■■■□□ 2.42
VSX1-205ENST00000429762 KTN1Q86UP2 1357 aaKnown RBP30.17■■■□□ 2.42
VSX1-205ENST00000429762 TMC1Q8TDI8 760 aa30.15■■■□□ 2.42
VSX1-205ENST00000429762 ZNF142P52746 1687 aaPredicted RBP30.15■■■□□ 2.42
VSX1-205ENST00000429762 ABCC11Q96J66 1382 aa30.15■■■□□ 2.42
VSX1-205ENST00000429762 KNDC1Q76NI1 1749 aa30.13■■■□□ 2.41
VSX1-205ENST00000429762 SLC12A5Q9H2X9 1139 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms