RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 TET3O43151 1660 aa15.22■□□□□ 0.03
LINC01238-203ENST00000429456 PPP2R1AP30153 589 aa15.21■□□□□ 0.03
LINC01238-203ENST00000429456 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
LINC01238-203ENST00000429456 KNSTRNQ9Y448 316 aa15.21■□□□□ 0.03
LINC01238-203ENST00000429456 CDCA8Q53HL2 280 aa15.21■□□□□ 0.02
LINC01238-203ENST00000429456 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.02
LINC01238-203ENST00000429456 MS4A1P11836 297 aa15.2■□□□□ 0.02
LINC01238-203ENST00000429456 KIAA1210Q9ULL0 1709 aa15.2■□□□□ 0.02
LINC01238-203ENST00000429456 VWDEQ8N2E2 1590 aa15.2■□□□□ 0.02
LINC01238-203ENST00000429456 PLIN1O60240 522 aa15.19■□□□□ 0.02
LINC01238-203ENST00000429456 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
LINC01238-203ENST00000429456 MYOM1P52179 1685 aa15.19■□□□□ 0.02
LINC01238-203ENST00000429456 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
LINC01238-203ENST00000429456 NEURL4Q96JN8 1562 aa15.19■□□□□ 0.02
LINC01238-203ENST00000429456 ASXL1Q8IXJ9 1541 aa15.18■□□□□ 0.02
LINC01238-203ENST00000429456 PDE4AP27815 886 aa15.18■□□□□ 0.02
LINC01238-203ENST00000429456 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
LINC01238-203ENST00000429456 INO80Q9ULG1 1556 aaPredicted RBP15.17■□□□□ 0.02
LINC01238-203ENST00000429456 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
LINC01238-203ENST00000429456 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
LINC01238-203ENST00000429456 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
LINC01238-203ENST00000429456 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
LINC01238-203ENST00000429456 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC01238-203ENST00000429456 DAXXQ9UER7 740 aaPredicted RBP15.16■□□□□ 0.02
LINC01238-203ENST00000429456 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
LINC01238-203ENST00000429456 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
LINC01238-203ENST00000429456 ABCA9Q8IUA7 1624 aa15.15■□□□□ 0.02
LINC01238-203ENST00000429456 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
LINC01238-203ENST00000429456 KANK1Q14678 1352 aa15.15■□□□□ 0.02
LINC01238-203ENST00000429456 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
LINC01238-203ENST00000429456 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
LINC01238-203ENST00000429456 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
LINC01238-203ENST00000429456 NBR1Q14596 966 aa15.14■□□□□ 0.01
LINC01238-203ENST00000429456 MYOM2P54296 1465 aa15.12■□□□□ 0.01
LINC01238-203ENST00000429456 MROH1Q8NDA8 1641 aa15.12■□□□□ 0.01
LINC01238-203ENST00000429456 MAP3K4Q9Y6R4 1608 aa15.12■□□□□ 0.01
LINC01238-203ENST00000429456 C20orf194Q5TEA3 1177 aa15.12■□□□□ 0.01
LINC01238-203ENST00000429456 FANCAO15360 1455 aa15.12■□□□□ 0.01
LINC01238-203ENST00000429456 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
LINC01238-203ENST00000429456 ABCA6Q8N139 1617 aa15.1■□□□□ 0.01
LINC01238-203ENST00000429456 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
LINC01238-203ENST00000429456 KDM2BQ8NHM5 1336 aa15.09■□□□□ 0.01
LINC01238-203ENST00000429456 KIF3BO15066 747 aa15.09■□□□□ 0.01
LINC01238-203ENST00000429456 KIF1BO60333 1816 aa15.09■□□□□ 0.01
LINC01238-203ENST00000429456 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
LINC01238-203ENST00000429456 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
LINC01238-203ENST00000429456 SLFN5Q08AF3 891 aa15.08■□□□□ 0.01
LINC01238-203ENST00000429456 TRMT2AQ8IZ69 625 aaKnown RBP15.08■□□□□ 0.01
LINC01238-203ENST00000429456 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0
LINC01238-203ENST00000429456 ADGRL1O94910 1474 aa15.08■□□□□ 0
LINC01238-203ENST00000429456 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
LINC01238-203ENST00000429456 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
LINC01238-203ENST00000429456 ADGRF5Q8IZF2 1346 aa15.06■□□□□ 0
LINC01238-203ENST00000429456 MYO3AQ8NEV4 1616 aa15.06■□□□□ 0
LINC01238-203ENST00000429456 NRXN1Q9ULB1 1477 aa15.05■□□□□ 0
LINC01238-203ENST00000429456 CENPQQ7L2Z9 268 aaPredicted RBP15.05■□□□□ 0
LINC01238-203ENST00000429456 SKAP1Q86WV1 359 aa15.05■□□□□ 0
LINC01238-203ENST00000429456 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.05■□□□□ 0
LINC01238-203ENST00000429456 MROH2AA6NES4 1674 aa15.05■□□□□ -0
LINC01238-203ENST00000429456 LMTK2Q8IWU2 1503 aa15.04■□□□□ -0
LINC01238-203ENST00000429456 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
LINC01238-203ENST00000429456 CCDC146Q8IYE0 955 aa15.04■□□□□ -0
LINC01238-203ENST00000429456 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
LINC01238-203ENST00000429456 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
LINC01238-203ENST00000429456 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
LINC01238-203ENST00000429456 KIDINS220Q9ULH0 1771 aa15.03■□□□□ -0
LINC01238-203ENST00000429456 APAF1O14727 1248 aa15.02■□□□□ -0
LINC01238-203ENST00000429456 NKTRP30414 1462 aaKnown RBP15.02□□□□□ -0.01
LINC01238-203ENST00000429456 NGEFQ8N5V2 710 aa15.01□□□□□ -0.01
LINC01238-203ENST00000429456 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
LINC01238-203ENST00000429456 SETBP1Q9Y6X0 1596 aa15.01□□□□□ -0.01
LINC01238-203ENST00000429456 ADGRB3O60242 1522 aa15□□□□□ -0.01
LINC01238-203ENST00000429456 E9PSI1 815 aa15□□□□□ -0.01
LINC01238-203ENST00000429456 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
LINC01238-203ENST00000429456 POLR3AO14802 1390 aaPredicted RBP14.99□□□□□ -0.01
LINC01238-203ENST00000429456 ASXL2Q76L83 1435 aa14.99□□□□□ -0.01
LINC01238-203ENST00000429456 NOS1P29475 1434 aa14.97□□□□□ -0.01
LINC01238-203ENST00000429456 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
LINC01238-203ENST00000429456 ZC3H13Q5T200 1668 aaKnown RBP14.97□□□□□ -0.01
LINC01238-203ENST00000429456 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
LINC01238-203ENST00000429456 PPLO60437 1756 aa14.96□□□□□ -0.01
LINC01238-203ENST00000429456 USP35Q9P2H5 1018 aa14.96□□□□□ -0.01
LINC01238-203ENST00000429456 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
LINC01238-203ENST00000429456 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
LINC01238-203ENST00000429456 BCAR3O75815 825 aa14.95□□□□□ -0.02
LINC01238-203ENST00000429456 FAM161AQ3B820 660 aa14.95□□□□□ -0.02
LINC01238-203ENST00000429456 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
LINC01238-203ENST00000429456 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
LINC01238-203ENST00000429456 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
LINC01238-203ENST00000429456 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
LINC01238-203ENST00000429456 C14orf93Q9H972 538 aaKnown RBP14.94□□□□□ -0.02
LINC01238-203ENST00000429456 ADGRB1O14514 1584 aa14.93□□□□□ -0.02
LINC01238-203ENST00000429456 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
LINC01238-203ENST00000429456 NPATQ14207 1427 aa14.93□□□□□ -0.02
LINC01238-203ENST00000429456 NEFMP07197 916 aa14.92□□□□□ -0.02
LINC01238-203ENST00000429456 WWC1Q8IX03 1113 aa14.92□□□□□ -0.02
LINC01238-203ENST00000429456 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
LINC01238-203ENST00000429456 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
LINC01238-203ENST00000429456 FRMPD1Q5SYB0 1578 aa14.92□□□□□ -0.02
LINC01238-203ENST00000429456 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms