RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 UNC13AQ9UPW8 1703 aa21.58■■□□□ 1.05
SMARCA4-203ENST00000429416 GOLGA6L22H0YM25 854 aa21.57■■□□□ 1.04
SMARCA4-203ENST00000429416 SF3B2Q13435 895 aaKnown RBP21.56■■□□□ 1.04
SMARCA4-203ENST00000429416 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
SMARCA4-203ENST00000429416 DDRGK1Q96HY6 314 aa21.56■■□□□ 1.04
SMARCA4-203ENST00000429416 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
SMARCA4-203ENST00000429416 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
SMARCA4-203ENST00000429416 HMMRO75330 724 aa21.55■■□□□ 1.04
SMARCA4-203ENST00000429416 MCCP23508 829 aa21.53■■□□□ 1.04
SMARCA4-203ENST00000429416 NEXNQ0ZGT2 675 aa21.53■■□□□ 1.04
SMARCA4-203ENST00000429416 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
SMARCA4-203ENST00000429416 FBXO31Q5XUX0 539 aaPredicted RBP21.53■■□□□ 1.04
SMARCA4-203ENST00000429416 CDK19Q9BWU1 502 aa21.53■■□□□ 1.04
SMARCA4-203ENST00000429416 RIPK4P57078 832 aa21.52■■□□□ 1.04
SMARCA4-203ENST00000429416 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
SMARCA4-203ENST00000429416 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
SMARCA4-203ENST00000429416 APAF1O14727 1248 aa21.51■■□□□ 1.03
SMARCA4-203ENST00000429416 PRDM11Q9NQV5 511 aa21.51■■□□□ 1.03
SMARCA4-203ENST00000429416 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
SMARCA4-203ENST00000429416 GPATCH3Q96I76 525 aa21.51■■□□□ 1.03
SMARCA4-203ENST00000429416 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
SMARCA4-203ENST00000429416 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
SMARCA4-203ENST00000429416 HSP90AB1P08238 724 aaKnown RBP21.49■■□□□ 1.03
SMARCA4-203ENST00000429416 HFM1A2PYH4 1435 aa21.49■■□□□ 1.03
SMARCA4-203ENST00000429416 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
SMARCA4-203ENST00000429416 ERBINQ96RT1 1412 aa21.49■■□□□ 1.03
SMARCA4-203ENST00000429416 CUL7Q14999 1698 aa21.48■■□□□ 1.03
SMARCA4-203ENST00000429416 DAPK1P53355 1430 aa21.48■■□□□ 1.03
SMARCA4-203ENST00000429416 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
SMARCA4-203ENST00000429416 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
SMARCA4-203ENST00000429416 PPP1R1BQ9UD71 204 aaPredicted RBP21.46■■□□□ 1.03
SMARCA4-203ENST00000429416 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
SMARCA4-203ENST00000429416 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
SMARCA4-203ENST00000429416 SLC12A5Q9H2X9 1139 aa21.45■■□□□ 1.02
SMARCA4-203ENST00000429416 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
SMARCA4-203ENST00000429416 DCAF8L1A6NGE4 600 aa21.45■■□□□ 1.02
SMARCA4-203ENST00000429416 RBM42Q9BTD8 480 aaKnown RBP21.45■■□□□ 1.02
SMARCA4-203ENST00000429416 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SMARCA4-203ENST00000429416 AKNAQ7Z591 1439 aa21.44■■□□□ 1.02
SMARCA4-203ENST00000429416 CCDC141Q6ZP82 1450 aa21.44■■□□□ 1.02
SMARCA4-203ENST00000429416 TOMM22Q9NS69 142 aa21.44■■□□□ 1.02
SMARCA4-203ENST00000429416 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
SMARCA4-203ENST00000429416 RTEL1-TNFRSF6BF6WH68 1400 aa21.43■■□□□ 1.02
SMARCA4-203ENST00000429416 FANCAO15360 1455 aa21.43■■□□□ 1.02
SMARCA4-203ENST00000429416 ZC3H6P61129 1189 aaKnown RBP21.43■■□□□ 1.02
SMARCA4-203ENST00000429416 AIMP1Q12904 312 aaKnown RBP21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 KIAA1107Q9UPP5 1409 aa21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 RPGRIP1LQ68CZ1 1315 aa21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 FBXW7Q969H0 707 aa21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
SMARCA4-203ENST00000429416 MTHFSP49914 203 aa21.41■■□□□ 1.02
SMARCA4-203ENST00000429416 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
SMARCA4-203ENST00000429416 ZNF692Q9BU19 519 aaPredicted RBP21.41■■□□□ 1.02
SMARCA4-203ENST00000429416 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
SMARCA4-203ENST00000429416 FKBP5Q13451 457 aaPredicted RBP21.4■■□□□ 1.02
SMARCA4-203ENST00000429416 ADAMTS2O95450 1211 aa21.39■■□□□ 1.02
SMARCA4-203ENST00000429416 PDE3BQ13370 1112 aa21.39■■□□□ 1.02
SMARCA4-203ENST00000429416 WAPLQ7Z5K2 1190 aa21.39■■□□□ 1.02
SMARCA4-203ENST00000429416 KIF7Q2M1P5 1343 aa21.39■■□□□ 1.02
SMARCA4-203ENST00000429416 CLSTN1O94985 981 aa21.39■■□□□ 1.01
SMARCA4-203ENST00000429416 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
SMARCA4-203ENST00000429416 SUPT6HQ7KZ85 1726 aaKnown RBP21.39■■□□□ 1.01
SMARCA4-203ENST00000429416 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
SMARCA4-203ENST00000429416 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
SMARCA4-203ENST00000429416 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
SMARCA4-203ENST00000429416 ASXL2Q76L83 1435 aa21.37■■□□□ 1.01
SMARCA4-203ENST00000429416 KIF14Q15058 1648 aa21.37■■□□□ 1.01
SMARCA4-203ENST00000429416 E9PSI1 815 aa21.37■■□□□ 1.01
SMARCA4-203ENST00000429416 IDI1Q13907 227 aa21.37■■□□□ 1.01
SMARCA4-203ENST00000429416 VPS37DQ86XT2 251 aa21.36■■□□□ 1.01
SMARCA4-203ENST00000429416 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
SMARCA4-203ENST00000429416 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
SMARCA4-203ENST00000429416 GOLGA6L4A6NEF3 574 aa21.36■■□□□ 1.01
SMARCA4-203ENST00000429416 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
SMARCA4-203ENST00000429416 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
SMARCA4-203ENST00000429416 RIC3Q7Z5B4 369 aa21.34■■□□□ 1.01
SMARCA4-203ENST00000429416 HSCBQ8IWL3 235 aa21.34■■□□□ 1.01
SMARCA4-203ENST00000429416 FOXO3O43524 673 aa21.33■■□□□ 1.01
SMARCA4-203ENST00000429416 SPRYD3Q8NCJ5 442 aa21.33■■□□□ 1.01
SMARCA4-203ENST00000429416 CAMSAP2Q08AD1 1489 aa21.33■■□□□ 1.01
SMARCA4-203ENST00000429416 NUDT16Q96DE0 195 aaKnown RBP21.33■■□□□ 1
SMARCA4-203ENST00000429416 ZKSCAN2Q63HK3 967 aa21.32■■□□□ 1
SMARCA4-203ENST00000429416 GNAI1P63096 354 aa21.31■■□□□ 1
SMARCA4-203ENST00000429416 PCF11O94913 1555 aaKnown RBP21.3■■□□□ 1
SMARCA4-203ENST00000429416 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
SMARCA4-203ENST00000429416 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
SMARCA4-203ENST00000429416 CCDC7Q96M83 1385 aa21.3■■□□□ 1
SMARCA4-203ENST00000429416 NGLY1Q96IV0 654 aa21.3■■□□□ 1
SMARCA4-203ENST00000429416 SULT6B1Q6IMI4 303 aa21.29■■□□□ 1
SMARCA4-203ENST00000429416 PRKAR2BP31323 418 aa21.29■■□□□ 1
SMARCA4-203ENST00000429416 TEX14Q8IWB6 1497 aa21.29■■□□□ 1
SMARCA4-203ENST00000429416 NOL10Q9BSC4 688 aaKnown RBP21.29■■□□□ 1
SMARCA4-203ENST00000429416 PLCB2Q00722 1185 aa21.28■■□□□ 1
SMARCA4-203ENST00000429416 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
SMARCA4-203ENST00000429416 CABP4P57796 275 aa21.28■■□□□ 1
SMARCA4-203ENST00000429416 HSPA2P54652 639 aa21.27■■□□□ 1
SMARCA4-203ENST00000429416 RRS1Q15050 365 aaKnown RBP21.27■■□□□ 1
SMARCA4-203ENST00000429416 PLIN1O60240 522 aa21.27■■□□□ 1
SMARCA4-203ENST00000429416 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms