RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
HMGCLL1-206ENST00000428842 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
HMGCLL1-206ENST00000428842 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
HMGCLL1-206ENST00000428842 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
HMGCLL1-206ENST00000428842 STK26Q9P289 416 aa13.53□□□□□ -0.24
HMGCLL1-206ENST00000428842 SLC26A8Q96RN1 970 aa13.53□□□□□ -0.24
HMGCLL1-206ENST00000428842 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.24
HMGCLL1-206ENST00000428842 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.25
HMGCLL1-206ENST00000428842 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
HMGCLL1-206ENST00000428842 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-206ENST00000428842 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
HMGCLL1-206ENST00000428842 PPLO60437 1756 aa13.51□□□□□ -0.25
HMGCLL1-206ENST00000428842 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
HMGCLL1-206ENST00000428842 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
HMGCLL1-206ENST00000428842 TRAK1Q9UPV9 953 aa13.5□□□□□ -0.25
HMGCLL1-206ENST00000428842 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
HMGCLL1-206ENST00000428842 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
HMGCLL1-206ENST00000428842 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
HMGCLL1-206ENST00000428842 RIMS2Q9UQ26 1411 aa13.49□□□□□ -0.25
HMGCLL1-206ENST00000428842 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
HMGCLL1-206ENST00000428842 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
HMGCLL1-206ENST00000428842 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
HMGCLL1-206ENST00000428842 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
HMGCLL1-206ENST00000428842 USP47Q96K76 1375 aa13.46□□□□□ -0.25
HMGCLL1-206ENST00000428842 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.26
HMGCLL1-206ENST00000428842 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
HMGCLL1-206ENST00000428842 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
HMGCLL1-206ENST00000428842 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
HMGCLL1-206ENST00000428842 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
HMGCLL1-206ENST00000428842 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
HMGCLL1-206ENST00000428842 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
HMGCLL1-206ENST00000428842 METP08581 1390 aa13.44□□□□□ -0.26
HMGCLL1-206ENST00000428842 DDX10Q13206 875 aaKnown RBP13.43□□□□□ -0.26
HMGCLL1-206ENST00000428842 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
HMGCLL1-206ENST00000428842 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
HMGCLL1-206ENST00000428842 SETD1BQ9UPS6 1966 aaKnown RBP13.42□□□□□ -0.26
HMGCLL1-206ENST00000428842 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
HMGCLL1-206ENST00000428842 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
HMGCLL1-206ENST00000428842 THEMISQ8N1K5 641 aaPredicted RBP13.41□□□□□ -0.26
HMGCLL1-206ENST00000428842 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
HMGCLL1-206ENST00000428842 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
HMGCLL1-206ENST00000428842 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
HMGCLL1-206ENST00000428842 MYOM2P54296 1465 aa13.4□□□□□ -0.26
HMGCLL1-206ENST00000428842 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
HMGCLL1-206ENST00000428842 NRXN1Q9ULB1 1477 aa13.39□□□□□ -0.27
HMGCLL1-206ENST00000428842 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
HMGCLL1-206ENST00000428842 PLEKHH1Q9ULM0 1364 aa13.38□□□□□ -0.27
HMGCLL1-206ENST00000428842 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
HMGCLL1-206ENST00000428842 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
HMGCLL1-206ENST00000428842 EID1Q9Y6B2 187 aa13.38□□□□□ -0.27
HMGCLL1-206ENST00000428842 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
HMGCLL1-206ENST00000428842 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
HMGCLL1-206ENST00000428842 PRAM1Q96QH2 718 aa13.37□□□□□ -0.27
HMGCLL1-206ENST00000428842 TESK2Q96S53 571 aa13.37□□□□□ -0.27
HMGCLL1-206ENST00000428842 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
HMGCLL1-206ENST00000428842 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
HMGCLL1-206ENST00000428842 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
HMGCLL1-206ENST00000428842 ANKLE2Q86XL3 938 aa13.35□□□□□ -0.27
HMGCLL1-206ENST00000428842 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
HMGCLL1-206ENST00000428842 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
HMGCLL1-206ENST00000428842 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
HMGCLL1-206ENST00000428842 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
HMGCLL1-206ENST00000428842 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
HMGCLL1-206ENST00000428842 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
HMGCLL1-206ENST00000428842 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.28
HMGCLL1-206ENST00000428842 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
HMGCLL1-206ENST00000428842 SLIT1O75093 1534 aa13.32□□□□□ -0.28
HMGCLL1-206ENST00000428842 KCNA6P17658 529 aa13.32□□□□□ -0.28
HMGCLL1-206ENST00000428842 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGCLL1-206ENST00000428842 ZNF142P52746 1687 aaPredicted RBP13.32□□□□□ -0.28
HMGCLL1-206ENST00000428842 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
HMGCLL1-206ENST00000428842 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
HMGCLL1-206ENST00000428842 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
HMGCLL1-206ENST00000428842 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
HMGCLL1-206ENST00000428842 POGKQ9P215 609 aa13.31□□□□□ -0.28
HMGCLL1-206ENST00000428842 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
HMGCLL1-206ENST00000428842 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
HMGCLL1-206ENST00000428842 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
HMGCLL1-206ENST00000428842 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
HMGCLL1-206ENST00000428842 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
HMGCLL1-206ENST00000428842 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
HMGCLL1-206ENST00000428842 MIER1Q8N108 512 aa13.28□□□□□ -0.28
HMGCLL1-206ENST00000428842 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.28
HMGCLL1-206ENST00000428842 STRCQ7RTU9 1775 aa13.27□□□□□ -0.29
HMGCLL1-206ENST00000428842 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.29
HMGCLL1-206ENST00000428842 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
HMGCLL1-206ENST00000428842 QRICH2Q9H0J4 1663 aa13.26□□□□□ -0.29
HMGCLL1-206ENST00000428842 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
HMGCLL1-206ENST00000428842 ZNF335Q9H4Z2 1342 aaPredicted RBP13.25□□□□□ -0.29
HMGCLL1-206ENST00000428842 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
HMGCLL1-206ENST00000428842 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
HMGCLL1-206ENST00000428842 MED14O60244 1454 aa13.25□□□□□ -0.29
HMGCLL1-206ENST00000428842 POLR1AO95602 1720 aaPredicted RBP13.24□□□□□ -0.29
HMGCLL1-206ENST00000428842 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
HMGCLL1-206ENST00000428842 TBX22Q9Y458 520 aa13.23□□□□□ -0.29
HMGCLL1-206ENST00000428842 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
HMGCLL1-206ENST00000428842 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
HMGCLL1-206ENST00000428842 TMF1P82094 1093 aa13.22□□□□□ -0.29
HMGCLL1-206ENST00000428842 STRCP1A6NGW2 1772 aa13.22□□□□□ -0.29
HMGCLL1-206ENST00000428842 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms