RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 MYOM3Q5VTT5 1437 aa18.51■□□□□ 0.55
ALMS1P1-201ENST00000428767 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
ALMS1P1-201ENST00000428767 KANK1Q14678 1352 aa18.51■□□□□ 0.55
ALMS1P1-201ENST00000428767 SPATA31A6Q5VVP1 1343 aa18.5■□□□□ 0.55
ALMS1P1-201ENST00000428767 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
ALMS1P1-201ENST00000428767 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
ALMS1P1-201ENST00000428767 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
ALMS1P1-201ENST00000428767 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
ALMS1P1-201ENST00000428767 RXRBP28702 533 aa18.47■□□□□ 0.55
ALMS1P1-201ENST00000428767 C14orf37Q86TY3 774 aa18.47■□□□□ 0.55
ALMS1P1-201ENST00000428767 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
ALMS1P1-201ENST00000428767 NUTM2BA6NNL0 878 aaPredicted RBP18.45■□□□□ 0.54
ALMS1P1-201ENST00000428767 NUTM2EB1AL46 878 aaPredicted RBP18.45■□□□□ 0.54
ALMS1P1-201ENST00000428767 NUTM2AQ8IVF1 878 aaPredicted RBP18.45■□□□□ 0.54
ALMS1P1-201ENST00000428767 NOS1P29475 1434 aa18.45■□□□□ 0.54
ALMS1P1-201ENST00000428767 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
ALMS1P1-201ENST00000428767 ABCC5O15440 1437 aa18.44■□□□□ 0.54
ALMS1P1-201ENST00000428767 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
ALMS1P1-201ENST00000428767 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
ALMS1P1-201ENST00000428767 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
ALMS1P1-201ENST00000428767 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
ALMS1P1-201ENST00000428767 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
ALMS1P1-201ENST00000428767 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
ALMS1P1-201ENST00000428767 AFF2P51816 1311 aa18.41■□□□□ 0.54
ALMS1P1-201ENST00000428767 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
ALMS1P1-201ENST00000428767 DAPK1P53355 1430 aa18.4■□□□□ 0.54
ALMS1P1-201ENST00000428767 RGS12O14924 1447 aa18.39■□□□□ 0.53
ALMS1P1-201ENST00000428767 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
ALMS1P1-201ENST00000428767 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
ALMS1P1-201ENST00000428767 ATF3P18847 181 aa18.38■□□□□ 0.53
ALMS1P1-201ENST00000428767 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
ALMS1P1-201ENST00000428767 SLC52A1Q9NWF4 448 aa18.37■□□□□ 0.53
ALMS1P1-201ENST00000428767 CHIC2Q9UKJ5 165 aa18.37■□□□□ 0.53
ALMS1P1-201ENST00000428767 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
ALMS1P1-201ENST00000428767 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
ALMS1P1-201ENST00000428767 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
ALMS1P1-201ENST00000428767 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
ALMS1P1-201ENST00000428767 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
ALMS1P1-201ENST00000428767 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.52
ALMS1P1-201ENST00000428767 TBX22Q9Y458 520 aa18.33■□□□□ 0.52
ALMS1P1-201ENST00000428767 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
ALMS1P1-201ENST00000428767 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
ALMS1P1-201ENST00000428767 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
ALMS1P1-201ENST00000428767 C8orf37Q96NL8 207 aa18.32■□□□□ 0.52
ALMS1P1-201ENST00000428767 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
ALMS1P1-201ENST00000428767 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
ALMS1P1-201ENST00000428767 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
ALMS1P1-201ENST00000428767 EP400Q96L91 3159 aa18.3■□□□□ 0.52
ALMS1P1-201ENST00000428767 TRPM2O94759 1503 aa18.29■□□□□ 0.52
ALMS1P1-201ENST00000428767 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
ALMS1P1-201ENST00000428767 SETD5Q9C0A6 1442 aa18.29■□□□□ 0.52
ALMS1P1-201ENST00000428767 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
ALMS1P1-201ENST00000428767 UNC13BO14795 1591 aa18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
ALMS1P1-201ENST00000428767 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
ALMS1P1-201ENST00000428767 MST1RQ04912 1400 aa18.25■□□□□ 0.51
ALMS1P1-201ENST00000428767 PNPLA6Q8IY17 1366 aa18.25■□□□□ 0.51
ALMS1P1-201ENST00000428767 E9PCH4 1651 aa18.25■□□□□ 0.51
ALMS1P1-201ENST00000428767 DCCP43146 1447 aa18.24■□□□□ 0.51
ALMS1P1-201ENST00000428767 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
ALMS1P1-201ENST00000428767 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
ALMS1P1-201ENST00000428767 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
ALMS1P1-201ENST00000428767 ADAMTS2O95450 1211 aa18.22■□□□□ 0.51
ALMS1P1-201ENST00000428767 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
ALMS1P1-201ENST00000428767 NRXN3Q9Y4C0 1643 aa18.21■□□□□ 0.51
ALMS1P1-201ENST00000428767 NGLY1Q96IV0 654 aa18.21■□□□□ 0.51
ALMS1P1-201ENST00000428767 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
ALMS1P1-201ENST00000428767 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
ALMS1P1-201ENST00000428767 USP21Q9UK80 565 aa18.15■□□□□ 0.5
ALMS1P1-201ENST00000428767 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
ALMS1P1-201ENST00000428767 FOXD1Q16676 465 aa18.14■□□□□ 0.49
ALMS1P1-201ENST00000428767 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 LOC105371045A0A1W2PR82 267 aa18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 APLP2Q06481 763 aa18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 LAMC1P11047 1609 aa18.12■□□□□ 0.49
ALMS1P1-201ENST00000428767 ATRNO75882 1429 aa18.1■□□□□ 0.49
ALMS1P1-201ENST00000428767 METP08581 1390 aa18.1■□□□□ 0.49
ALMS1P1-201ENST00000428767 MARF1Q9Y4F3 1742 aaKnown RBP18.09■□□□□ 0.49
ALMS1P1-201ENST00000428767 C1orf167Q5SNV9 1468 aa18.09■□□□□ 0.49
ALMS1P1-201ENST00000428767 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
ALMS1P1-201ENST00000428767 PTCH1Q13635 1447 aa18.07■□□□□ 0.48
ALMS1P1-201ENST00000428767 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
ALMS1P1-201ENST00000428767 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
ALMS1P1-201ENST00000428767 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
ALMS1P1-201ENST00000428767 ORAI2Q96SN7 254 aa18.04■□□□□ 0.48
ALMS1P1-201ENST00000428767 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
ALMS1P1-201ENST00000428767 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
ALMS1P1-201ENST00000428767 CCDC125Q86Z20 511 aa18.02■□□□□ 0.48
ALMS1P1-201ENST00000428767 LRP5O75197 1615 aa18.01■□□□□ 0.47
ALMS1P1-201ENST00000428767 MYOM2P54296 1465 aa18.01■□□□□ 0.47
ALMS1P1-201ENST00000428767 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
ALMS1P1-201ENST00000428767 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.01■□□□□ 0.47
ALMS1P1-201ENST00000428767 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
ALMS1P1-201ENST00000428767 NUP155O75694 1391 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms