RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
TNS3-204ENST00000428457 KIF21BO75037 1637 aa12.36□□□□□ -0.43
TNS3-204ENST00000428457 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
TNS3-204ENST00000428457 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
TNS3-204ENST00000428457 ST18O60284 1047 aa12.34□□□□□ -0.43
TNS3-204ENST00000428457 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
TNS3-204ENST00000428457 EFCAB5A4FU69 1503 aa12.33□□□□□ -0.43
TNS3-204ENST00000428457 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.44
TNS3-204ENST00000428457 NUTM2FA1L443 756 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 FYCO1Q9BQS8 1478 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 GPRASP1Q5JY77 1395 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 ANKLE2Q86XL3 938 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
TNS3-204ENST00000428457 PANK3Q9H999 370 aa12.33□□□□□ -0.44
TNS3-204ENST00000428457 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
TNS3-204ENST00000428457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNS3-204ENST00000428457 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
TNS3-204ENST00000428457 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
TNS3-204ENST00000428457 PHF14O94880 888 aa12.32□□□□□ -0.44
TNS3-204ENST00000428457 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
TNS3-204ENST00000428457 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
TNS3-204ENST00000428457 GORABQ5T7V8 394 aa12.32□□□□□ -0.44
TNS3-204ENST00000428457 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
TNS3-204ENST00000428457 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
TNS3-204ENST00000428457 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
TNS3-204ENST00000428457 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
TNS3-204ENST00000428457 MAGI1Q96QZ7 1491 aaPredicted RBP12.31□□□□□ -0.44
TNS3-204ENST00000428457 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
TNS3-204ENST00000428457 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
TNS3-204ENST00000428457 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
TNS3-204ENST00000428457 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
TNS3-204ENST00000428457 KIAA0586Q9BVV6 1533 aa12.3□□□□□ -0.44
TNS3-204ENST00000428457 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
TNS3-204ENST00000428457 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 APAF1O14727 1248 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 MRE11P49959 708 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 RBM10P98175 930 aaKnown RBP12.29□□□□□ -0.44
TNS3-204ENST00000428457 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 USP47Q96K76 1375 aa12.29□□□□□ -0.44
TNS3-204ENST00000428457 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
TNS3-204ENST00000428457 TEFQ10587 303 aa12.28□□□□□ -0.44
TNS3-204ENST00000428457 AKNAQ7Z591 1439 aa12.28□□□□□ -0.44
TNS3-204ENST00000428457 HMMRO75330 724 aa12.28□□□□□ -0.44
TNS3-204ENST00000428457 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
TNS3-204ENST00000428457 SLC52A1Q9NWF4 448 aa12.28□□□□□ -0.44
TNS3-204ENST00000428457 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.44
TNS3-204ENST00000428457 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.44
TNS3-204ENST00000428457 E9PSI1 815 aa12.27□□□□□ -0.45
TNS3-204ENST00000428457 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
TNS3-204ENST00000428457 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
TNS3-204ENST00000428457 RRBP1Q9P2E9 1410 aaKnown RBP12.27□□□□□ -0.45
TNS3-204ENST00000428457 ELL2O00472 640 aaPredicted RBP12.27□□□□□ -0.45
TNS3-204ENST00000428457 TRAK2O60296 914 aa12.27□□□□□ -0.45
TNS3-204ENST00000428457 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
TNS3-204ENST00000428457 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 NASPP49321 788 aaPredicted RBP12.26□□□□□ -0.45
TNS3-204ENST00000428457 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 ZKSCAN2Q63HK3 967 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 LRRC9Q6ZRR7 1453 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 MCTP1Q6DN14 999 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
TNS3-204ENST00000428457 ANKRD50Q9ULJ7 1429 aa12.25□□□□□ -0.45
TNS3-204ENST00000428457 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
TNS3-204ENST00000428457 C22orf23Q9BZE7 217 aa12.25□□□□□ -0.45
TNS3-204ENST00000428457 BACH2Q9BYV9 841 aa12.25□□□□□ -0.45
TNS3-204ENST00000428457 CNTLNQ9NXG0 1405 aa12.25□□□□□ -0.45
TNS3-204ENST00000428457 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 TOP2BQ02880 1626 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 TPM4P67936 248 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
TNS3-204ENST00000428457 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 RNF214Q8ND24 703 aa12.24□□□□□ -0.45
TNS3-204ENST00000428457 CCAR2Q8N163 923 aaKnown RBP12.23□□□□□ -0.45
TNS3-204ENST00000428457 PANK1Q8TE04 598 aa12.23□□□□□ -0.45
TNS3-204ENST00000428457 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
TNS3-204ENST00000428457 RILPL2Q969X0 211 aa12.22□□□□□ -0.45
TNS3-204ENST00000428457 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
TNS3-204ENST00000428457 NEXNQ0ZGT2 675 aa12.22□□□□□ -0.45
TNS3-204ENST00000428457 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
TNS3-204ENST00000428457 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
TNS3-204ENST00000428457 TPM2P07951 284 aa12.21□□□□□ -0.45
TNS3-204ENST00000428457 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
TNS3-204ENST00000428457 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
TNS3-204ENST00000428457 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
TNS3-204ENST00000428457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.2□□□□□ -0.46
TNS3-204ENST00000428457 LNPKQ9C0E8 428 aa12.2□□□□□ -0.46
TNS3-204ENST00000428457 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
TNS3-204ENST00000428457 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
TNS3-204ENST00000428457 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
TNS3-204ENST00000428457 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
TNS3-204ENST00000428457 NOL10Q9BSC4 688 aaKnown RBP12.2□□□□□ -0.46
TNS3-204ENST00000428457 SYTL4Q96C24 671 aaPredicted RBP12.2□□□□□ -0.46
TNS3-204ENST00000428457 NOC3LQ8WTT2 800 aaKnown RBP12.19□□□□□ -0.46
TNS3-204ENST00000428457 BECN2A8MW95 431 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms