RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
NCBP2-205ENST00000428425 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
NCBP2-205ENST00000428425 MYOM2P54296 1465 aa18.9■□□□□ 0.62
NCBP2-205ENST00000428425 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
NCBP2-205ENST00000428425 SIGLEC1Q9BZZ2 1709 aa18.89■□□□□ 0.61
NCBP2-205ENST00000428425 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
NCBP2-205ENST00000428425 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
NCBP2-205ENST00000428425 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
NCBP2-205ENST00000428425 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
NCBP2-205ENST00000428425 PANK3Q9H999 370 aa18.88■□□□□ 0.61
NCBP2-205ENST00000428425 CAMSAP1Q5T5Y3 1602 aa18.88■□□□□ 0.61
NCBP2-205ENST00000428425 KIAA1210Q9ULL0 1709 aa18.87■□□□□ 0.61
NCBP2-205ENST00000428425 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
NCBP2-205ENST00000428425 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
NCBP2-205ENST00000428425 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
NCBP2-205ENST00000428425 NOS1P29475 1434 aa18.86■□□□□ 0.61
NCBP2-205ENST00000428425 RALBP1Q15311 655 aa18.86■□□□□ 0.61
NCBP2-205ENST00000428425 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
NCBP2-205ENST00000428425 NEFLP07196 543 aa18.85■□□□□ 0.61
NCBP2-205ENST00000428425 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
NCBP2-205ENST00000428425 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
NCBP2-205ENST00000428425 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
NCBP2-205ENST00000428425 SYNMO15061 1565 aa18.83■□□□□ 0.6
NCBP2-205ENST00000428425 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.6
NCBP2-205ENST00000428425 PPLO60437 1756 aa18.82■□□□□ 0.6
NCBP2-205ENST00000428425 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
NCBP2-205ENST00000428425 MYOM1P52179 1685 aa18.79■□□□□ 0.6
NCBP2-205ENST00000428425 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
NCBP2-205ENST00000428425 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
NCBP2-205ENST00000428425 EIF3AQ14152 1382 aaKnown RBP18.78■□□□□ 0.6
NCBP2-205ENST00000428425 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
NCBP2-205ENST00000428425 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
NCBP2-205ENST00000428425 ZMYM4Q5VZL5 1548 aa18.77■□□□□ 0.6
NCBP2-205ENST00000428425 ERVK-7P63135 1459 aa18.76■□□□□ 0.59
NCBP2-205ENST00000428425 ZC3H13Q5T200 1668 aaKnown RBP18.75■□□□□ 0.59
NCBP2-205ENST00000428425 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
NCBP2-205ENST00000428425 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
NCBP2-205ENST00000428425 ADGRB1O14514 1584 aa18.73■□□□□ 0.59
NCBP2-205ENST00000428425 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
NCBP2-205ENST00000428425 IDI1Q13907 227 aa18.73■□□□□ 0.59
NCBP2-205ENST00000428425 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
NCBP2-205ENST00000428425 C14orf93Q9H972 538 aaKnown RBP18.72■□□□□ 0.59
NCBP2-205ENST00000428425 NEXMIFQ5QGS0 1516 aa18.72■□□□□ 0.59
NCBP2-205ENST00000428425 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
NCBP2-205ENST00000428425 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
NCBP2-205ENST00000428425 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
NCBP2-205ENST00000428425 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
NCBP2-205ENST00000428425 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
NCBP2-205ENST00000428425 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
NCBP2-205ENST00000428425 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
NCBP2-205ENST00000428425 SMG6Q86US8 1419 aaKnown RBP18.7■□□□□ 0.58
NCBP2-205ENST00000428425 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
NCBP2-205ENST00000428425 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
NCBP2-205ENST00000428425 RPGRIP1LQ68CZ1 1315 aa18.69■□□□□ 0.58
NCBP2-205ENST00000428425 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
NCBP2-205ENST00000428425 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
NCBP2-205ENST00000428425 CENPJQ9HC77 1338 aaPredicted RBP18.67■□□□□ 0.58
NCBP2-205ENST00000428425 KDM4FA0A1W2PPD8 638 aa18.67■□□□□ 0.58
NCBP2-205ENST00000428425 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
NCBP2-205ENST00000428425 ASXL1Q8IXJ9 1541 aa18.66■□□□□ 0.58
NCBP2-205ENST00000428425 SALL2Q9Y467 1007 aaPredicted RBP18.66■□□□□ 0.58
NCBP2-205ENST00000428425 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
NCBP2-205ENST00000428425 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
NCBP2-205ENST00000428425 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
NCBP2-205ENST00000428425 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
NCBP2-205ENST00000428425 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.57
NCBP2-205ENST00000428425 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
NCBP2-205ENST00000428425 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
NCBP2-205ENST00000428425 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
NCBP2-205ENST00000428425 REREQ9P2R6 1566 aa18.62■□□□□ 0.57
NCBP2-205ENST00000428425 CLTCQ00610 1675 aaKnown RBP18.61■□□□□ 0.57
NCBP2-205ENST00000428425 MLECQ14165 292 aa18.61■□□□□ 0.57
NCBP2-205ENST00000428425 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
NCBP2-205ENST00000428425 AGLP35573 1532 aa18.6■□□□□ 0.57
NCBP2-205ENST00000428425 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
NCBP2-205ENST00000428425 ADAMTS8Q9UP79 889 aa18.58■□□□□ 0.56
NCBP2-205ENST00000428425 NPC1L1Q9UHC9 1359 aa18.57■□□□□ 0.56
NCBP2-205ENST00000428425 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
NCBP2-205ENST00000428425 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
NCBP2-205ENST00000428425 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
NCBP2-205ENST00000428425 ARHGEF40Q8TER5 1519 aa18.56■□□□□ 0.56
NCBP2-205ENST00000428425 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
NCBP2-205ENST00000428425 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
NCBP2-205ENST00000428425 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
NCBP2-205ENST00000428425 STK26Q9P289 416 aa18.55■□□□□ 0.56
NCBP2-205ENST00000428425 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
NCBP2-205ENST00000428425 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
NCBP2-205ENST00000428425 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.56
NCBP2-205ENST00000428425 INSRP06213 1382 aa18.52■□□□□ 0.55
NCBP2-205ENST00000428425 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
NCBP2-205ENST00000428425 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
NCBP2-205ENST00000428425 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
NCBP2-205ENST00000428425 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
NCBP2-205ENST00000428425 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
NCBP2-205ENST00000428425 PTPRMP28827 1452 aa18.49■□□□□ 0.55
NCBP2-205ENST00000428425 A2ML1A8K2U0 1454 aa18.48■□□□□ 0.55
NCBP2-205ENST00000428425 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
NCBP2-205ENST00000428425 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
NCBP2-205ENST00000428425 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
NCBP2-205ENST00000428425 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms