RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
SNX13-203ENST00000428135 GLIPR1L2Q4G1C9 344 aa12.15□□□□□ -0.46
SNX13-203ENST00000428135 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
SNX13-203ENST00000428135 ANKRD45Q5TZF3 282 aa12.14□□□□□ -0.47
SNX13-203ENST00000428135 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
SNX13-203ENST00000428135 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
SNX13-203ENST00000428135 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
SNX13-203ENST00000428135 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
SNX13-203ENST00000428135 USP47Q96K76 1375 aa12.13□□□□□ -0.47
SNX13-203ENST00000428135 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
SNX13-203ENST00000428135 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
SNX13-203ENST00000428135 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNX13-203ENST00000428135 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
SNX13-203ENST00000428135 MYOM3Q5VTT5 1437 aa12.12□□□□□ -0.47
SNX13-203ENST00000428135 ARID3AQ99856 593 aa12.12□□□□□ -0.47
SNX13-203ENST00000428135 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
SNX13-203ENST00000428135 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
SNX13-203ENST00000428135 RIPK4P57078 832 aa12.12□□□□□ -0.47
SNX13-203ENST00000428135 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
SNX13-203ENST00000428135 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
SNX13-203ENST00000428135 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
SNX13-203ENST00000428135 CFAP70Q5T0N1 1121 aa12.11□□□□□ -0.47
SNX13-203ENST00000428135 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 MARCH6O60337 910 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 PLB1Q6P1J6 1458 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
SNX13-203ENST00000428135 CDK13Q14004 1512 aaKnown RBP12.1□□□□□ -0.47
SNX13-203ENST00000428135 NRDCO43847 1150 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
SNX13-203ENST00000428135 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
SNX13-203ENST00000428135 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
SNX13-203ENST00000428135 NLRP6P59044 892 aa12.09□□□□□ -0.47
SNX13-203ENST00000428135 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
SNX13-203ENST00000428135 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
SNX13-203ENST00000428135 ANKRD50Q9ULJ7 1429 aa12.08□□□□□ -0.48
SNX13-203ENST00000428135 FGD6Q6ZV73 1430 aa12.08□□□□□ -0.48
SNX13-203ENST00000428135 CRBNQ96SW2 442 aa12.08□□□□□ -0.48
SNX13-203ENST00000428135 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
SNX13-203ENST00000428135 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
SNX13-203ENST00000428135 VPS37DQ86XT2 251 aa12.08□□□□□ -0.48
SNX13-203ENST00000428135 FKBP5Q13451 457 aaPredicted RBP12.08□□□□□ -0.48
SNX13-203ENST00000428135 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 APPP05067 770 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 EXOC6Q8TAG9 804 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 KIF21BO75037 1637 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
SNX13-203ENST00000428135 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 FYB1O15117 783 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 MSNP26038 577 aaKnown RBP12.06□□□□□ -0.48
SNX13-203ENST00000428135 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
SNX13-203ENST00000428135 PRM3Q9NNZ6 103 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 GRIN2AQ12879 1464 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 FOSBP53539 338 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 KDM4AO75164 1064 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
SNX13-203ENST00000428135 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
SNX13-203ENST00000428135 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
SNX13-203ENST00000428135 ZKSCAN2Q63HK3 967 aa12.04□□□□□ -0.48
SNX13-203ENST00000428135 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
SNX13-203ENST00000428135 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
SNX13-203ENST00000428135 PES1O00541 588 aaKnown RBP12.04□□□□□ -0.48
SNX13-203ENST00000428135 HSPA2P54652 639 aa12.03□□□□□ -0.48
SNX13-203ENST00000428135 KIAA0586Q9BVV6 1533 aa12.03□□□□□ -0.48
SNX13-203ENST00000428135 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
SNX13-203ENST00000428135 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
SNX13-203ENST00000428135 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
SNX13-203ENST00000428135 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
SNX13-203ENST00000428135 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
SNX13-203ENST00000428135 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.48
SNX13-203ENST00000428135 POGZQ7Z3K3 1410 aa12.02□□□□□ -0.48
SNX13-203ENST00000428135 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
SNX13-203ENST00000428135 L1TD1Q5T7N2 865 aaKnown RBP12.02□□□□□ -0.49
SNX13-203ENST00000428135 E9PSI1 815 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 H3BQV1 296 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 CHAF1AQ13111 956 aaPredicted RBP12.01□□□□□ -0.49
SNX13-203ENST00000428135 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 DEKP35659 375 aaKnown RBP12.01□□□□□ -0.49
SNX13-203ENST00000428135 NEUROD6Q96NK8 337 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
SNX13-203ENST00000428135 KIAA2012Q0VF49 1180 aa12.01□□□□□ -0.49
SNX13-203ENST00000428135 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
SNX13-203ENST00000428135 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
SNX13-203ENST00000428135 C9orf84Q5VXU9 1444 aa12□□□□□ -0.49
SNX13-203ENST00000428135 FAM184AQ8NB25 1140 aa12□□□□□ -0.49
SNX13-203ENST00000428135 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
SNX13-203ENST00000428135 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
SNX13-203ENST00000428135 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
SNX13-203ENST00000428135 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
SNX13-203ENST00000428135 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
SNX13-203ENST00000428135 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
SNX13-203ENST00000428135 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms