RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 PRAG1Q86YV5 1406 aa4.65□□□□□ -1.66
RGPD1-203ENST00000428128 LRRIQ1Q96JM4 1722 aa4.65□□□□□ -1.67
RGPD1-203ENST00000428128 NPATQ14207 1427 aa4.65□□□□□ -1.67
RGPD1-203ENST00000428128 VGFO15240 615 aaPredicted RBP4.65□□□□□ -1.67
RGPD1-203ENST00000428128 TICAM2Q86XR7 235 aa4.64□□□□□ -1.67
RGPD1-203ENST00000428128 PLSCR2Q9NRY7 297 aa4.64□□□□□ -1.67
RGPD1-203ENST00000428128 ABCA6Q8N139 1617 aa4.64□□□□□ -1.67
RGPD1-203ENST00000428128 CPS1P31327 1500 aa4.64□□□□□ -1.67
RGPD1-203ENST00000428128 UNCXA6NJT0 531 aa4.64□□□□□ -1.67
RGPD1-203ENST00000428128 RIMS1Q86UR5 1692 aaKnown RBP4.64□□□□□ -1.67
RGPD1-203ENST00000428128 MED14O60244 1454 aa4.63□□□□□ -1.67
RGPD1-203ENST00000428128 BRD1O95696 1058 aa4.63□□□□□ -1.67
RGPD1-203ENST00000428128 MCM6Q14566 821 aa4.63□□□□□ -1.67
RGPD1-203ENST00000428128 GSE1Q14687 1217 aa4.63□□□□□ -1.67
RGPD1-203ENST00000428128 SMYD5Q6GMV2 418 aa4.63□□□□□ -1.67
RGPD1-203ENST00000428128 PROSER2Q86WR7 435 aaPredicted RBP4.63□□□□□ -1.67
RGPD1-203ENST00000428128 MARF1Q9Y4F3 1742 aaKnown RBP4.62□□□□□ -1.67
RGPD1-203ENST00000428128 SEMA3EO15041 775 aa4.62□□□□□ -1.67
RGPD1-203ENST00000428128 SPATA32Q96LK8 384 aa4.62□□□□□ -1.67
RGPD1-203ENST00000428128 WDR70Q9NW82 654 aa4.62□□□□□ -1.67
RGPD1-203ENST00000428128 ZBTB47Q9UFB7 747 aaPredicted RBP4.62□□□□□ -1.67
RGPD1-203ENST00000428128 CLUAP1Q96AJ1 413 aa4.62□□□□□ -1.67
RGPD1-203ENST00000428128 DDRGK1Q96HY6 314 aa4.62□□□□□ -1.67
RGPD1-203ENST00000428128 COL22A1Q8NFW1 1626 aaPredicted RBP4.61□□□□□ -1.67
RGPD1-203ENST00000428128 GOLGA3Q08378 1498 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 NCOA2Q15596 1464 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 AEBP1Q8IUX7 1158 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 C19orf67A6NJJ6 358 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 FAM117AQ9C073 453 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 PLEKHH2Q8IVE3 1493 aa4.61□□□□□ -1.67
RGPD1-203ENST00000428128 AMHR2Q16671 573 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
RGPD1-203ENST00000428128 NEURL4Q96JN8 1562 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 CERS3Q8IU89 383 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 USTQ9Y2C2 406 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 DIP2CQ9Y2E4 1556 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 CDC42BPBQ9Y5S2 1711 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 TCOF1Q13428 1488 aaKnown RBP4.6□□□□□ -1.67
RGPD1-203ENST00000428128 QSER1Q2KHR3 1735 aa4.6□□□□□ -1.67
RGPD1-203ENST00000428128 CDK12Q9NYV4 1490 aaPredicted RBP4.6□□□□□ -1.67
RGPD1-203ENST00000428128 ZNF316A6NFI3 1004 aaPredicted RBP4.59□□□□□ -1.67
RGPD1-203ENST00000428128 GPR37O15354 613 aa4.59□□□□□ -1.67
RGPD1-203ENST00000428128 WRNQ14191 1432 aaPredicted RBP eCLIP4.59□□□□□ -1.67
RGPD1-203ENST00000428128 UGGT1Q9NYU2 1555 aa4.59□□□□□ -1.67
RGPD1-203ENST00000428128 LHX8Q68G74 356 aa4.59□□□□□ -1.67
RGPD1-203ENST00000428128 VWDEQ8N2E2 1590 aa4.59□□□□□ -1.67
RGPD1-203ENST00000428128 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.68
RGPD1-203ENST00000428128 CEP170BQ9Y4F5 1589 aaPredicted RBP4.59□□□□□ -1.68
RGPD1-203ENST00000428128 NHSL1Q5SYE7 1610 aa4.59□□□□□ -1.68
RGPD1-203ENST00000428128 VAMP1P23763 118 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 NUBP1P53384 320 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 IQGAP3Q86VI3 1631 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 PTPRMP28827 1452 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 CLSTN1O94985 981 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 E2F4Q16254 413 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 SRPK2P78362 688 aaKnown RBP4.58□□□□□ -1.68
RGPD1-203ENST00000428128 MFSD10Q14728 455 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 SND1Q7KZF4 910 aaKnown RBP eCLIP4.58□□□□□ -1.68
RGPD1-203ENST00000428128 REM2Q8IYK8 340 aaPredicted RBP4.58□□□□□ -1.68
RGPD1-203ENST00000428128 KIDINS220Q9ULH0 1771 aa4.58□□□□□ -1.68
RGPD1-203ENST00000428128 SUPT6HQ7KZ85 1726 aaKnown RBP4.57□□□□□ -1.68
RGPD1-203ENST00000428128 CIZ1Q9ULV3 898 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-203ENST00000428128 ABCC3O15438 1527 aa4.57□□□□□ -1.68
RGPD1-203ENST00000428128 TBC1D12O60347 775 aa4.57□□□□□ -1.68
RGPD1-203ENST00000428128 CAMK2BQ13554 666 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 TXNDC2Q86VQ3 553 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 USP35Q9P2H5 1018 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.56□□□□□ -1.68
RGPD1-203ENST00000428128 CDC42BPAQ5VT25 1732 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 TSPOAP1O95153 1857 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 GNEQ9Y223 722 aaKnown RBP4.56□□□□□ -1.68
RGPD1-203ENST00000428128 DIP2AQ14689 1571 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 PLEKHD1A6NEE1 506 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 OXER1Q8TDS5 423 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 UACAQ9BZF9 1416 aa4.56□□□□□ -1.68
RGPD1-203ENST00000428128 CWC22Q9HCG8 908 aaKnown RBP4.55□□□□□ -1.68
RGPD1-203ENST00000428128 TNIKQ9UKE5 1360 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 FANCAO15360 1455 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 CCDC97Q96F63 343 aaPredicted RBP4.55□□□□□ -1.68
RGPD1-203ENST00000428128 KIAA1522Q9P206 1035 aaPredicted RBP4.55□□□□□ -1.68
RGPD1-203ENST00000428128 ZFYVE16Q7Z3T8 1539 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 MED1Q15648 1581 aaPredicted RBP4.55□□□□□ -1.68
RGPD1-203ENST00000428128 ANKRD13AQ8IZ07 590 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 FBXW7Q969H0 707 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 SSUH2Q9Y2M2 353 aa4.55□□□□□ -1.68
RGPD1-203ENST00000428128 STRCP1A6NGW2 1772 aa4.54□□□□□ -1.68
RGPD1-203ENST00000428128 ABCC1P33527 1531 aa4.54□□□□□ -1.68
RGPD1-203ENST00000428128 TCF3P15923 654 aa4.54□□□□□ -1.68
RGPD1-203ENST00000428128 ERCC3P19447 782 aa4.54□□□□□ -1.68
RGPD1-203ENST00000428128 CDK13Q14004 1512 aaKnown RBP4.54□□□□□ -1.68
RGPD1-203ENST00000428128 ARHGEF5Q12774 1597 aa4.54□□□□□ -1.68
RGPD1-203ENST00000428128 STK25O00506 426 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 CCDC27Q2M243 656 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 PLCD3Q8N3E9 789 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 ZFP91Q96JP5 570 aaPredicted RBP4.53□□□□□ -1.68
RGPD1-203ENST00000428128 DRC1Q96MC2 740 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 TMEM131LA2VDJ0 1609 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 BRPF3Q9ULD4 1205 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 ASXL2Q76L83 1435 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms