RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 TMF1P82094 1093 aa31.81■■■□□ 2.68
FAAP20-209ENST00000428120 NOS1P29475 1434 aa31.8■■■□□ 2.68
FAAP20-209ENST00000428120 SCAF11Q99590 1463 aaKnown RBP31.8■■■□□ 2.68
FAAP20-209ENST00000428120 SYNMO15061 1565 aa31.77■■■□□ 2.68
FAAP20-209ENST00000428120 ZC3H13Q5T200 1668 aaKnown RBP31.76■■■□□ 2.68
FAAP20-209ENST00000428120 KIAA1210Q9ULL0 1709 aa31.76■■■□□ 2.67
FAAP20-209ENST00000428120 ARHGAP31Q2M1Z3 1444 aa31.74■■■□□ 2.67
FAAP20-209ENST00000428120 NRXN1Q9ULB1 1477 aa31.72■■■□□ 2.67
FAAP20-209ENST00000428120 PPLO60437 1756 aa31.7■■■□□ 2.66
FAAP20-209ENST00000428120 NUTM2DQ5VT03 806 aaPredicted RBP31.7■■■□□ 2.66
FAAP20-209ENST00000428120 PIK3C2BO00750 1634 aa31.69■■■□□ 2.66
FAAP20-209ENST00000428120 IDI1Q13907 227 aa31.68■■■□□ 2.66
FAAP20-209ENST00000428120 EIF3AQ14152 1382 aaKnown RBP31.67■■■□□ 2.66
FAAP20-209ENST00000428120 PANK3Q9H999 370 aa31.66■■■□□ 2.66
FAAP20-209ENST00000428120 PER1O15534 1290 aaPredicted RBP31.65■■■□□ 2.66
FAAP20-209ENST00000428120 FBXO31Q5XUX0 539 aaPredicted RBP31.65■■■□□ 2.66
FAAP20-209ENST00000428120 MLECQ14165 292 aa31.64■■■□□ 2.66
FAAP20-209ENST00000428120 PIK3C2GO75747 1445 aa31.64■■■□□ 2.66
FAAP20-209ENST00000428120 RPGRIP1LQ68CZ1 1315 aa31.63■■■□□ 2.65
FAAP20-209ENST00000428120 PREX1Q8TCU6 1659 aa31.62■■■□□ 2.65
FAAP20-209ENST00000428120 REREQ9P2R6 1566 aa31.62■■■□□ 2.65
FAAP20-209ENST00000428120 RALBP1Q15311 655 aa31.6■■■□□ 2.65
FAAP20-209ENST00000428120 SLC52A1Q9NWF4 448 aa31.59■■■□□ 2.65
FAAP20-209ENST00000428120 AGLP35573 1532 aa31.59■■■□□ 2.65
FAAP20-209ENST00000428120 KTN1Q86UP2 1357 aaKnown RBP31.58■■■□□ 2.65
FAAP20-209ENST00000428120 TMC1Q8TDI8 760 aa31.58■■■□□ 2.65
FAAP20-209ENST00000428120 C14orf93Q9H972 538 aaKnown RBP31.58■■■□□ 2.65
FAAP20-209ENST00000428120 MYBBP1AQ9BQG0 1328 aaKnown RBP31.58■■■□□ 2.65
FAAP20-209ENST00000428120 TMEM132EQ6IEE7 984 aa31.58■■■□□ 2.65
FAAP20-209ENST00000428120 SENP3Q9H4L4 574 aaPredicted RBP31.58■■■□□ 2.65
FAAP20-209ENST00000428120 CC2D1BQ5T0F9 858 aaKnown RBP31.57■■■□□ 2.64
FAAP20-209ENST00000428120 SUPT16HQ9Y5B9 1047 aaKnown RBP31.57■■■□□ 2.64
FAAP20-209ENST00000428120 NEXMIFQ5QGS0 1516 aa31.56■■■□□ 2.64
FAAP20-209ENST00000428120 CDCA8Q53HL2 280 aa31.55■■■□□ 2.64
FAAP20-209ENST00000428120 TRAK1Q9UPV9 953 aa31.55■■■□□ 2.64
FAAP20-209ENST00000428120 ARHGEF40Q8TER5 1519 aa31.54■■■□□ 2.64
FAAP20-209ENST00000428120 MYO5BQ9ULV0 1848 aa31.53■■■□□ 2.64
FAAP20-209ENST00000428120 CLTCQ00610 1675 aaKnown RBP31.53■■■□□ 2.64
FAAP20-209ENST00000428120 SETBP1Q9Y6X0 1596 aa31.53■■■□□ 2.64
FAAP20-209ENST00000428120 PARD3Q8TEW0 1356 aa31.53■■■□□ 2.64
FAAP20-209ENST00000428120 VGFO15240 615 aaPredicted RBP31.53■■■□□ 2.64
FAAP20-209ENST00000428120 ERVK-7P63135 1459 aa31.51■■■□□ 2.63
FAAP20-209ENST00000428120 ADGRB1O14514 1584 aa31.5■■■□□ 2.63
FAAP20-209ENST00000428120 PNISRQ8TF01 805 aaKnown RBP31.5■■■□□ 2.63
FAAP20-209ENST00000428120 TMEM131LA2VDJ0 1609 aa31.48■■■□□ 2.63
FAAP20-209ENST00000428120 PPP6R1Q9UPN7 881 aa31.48■■■□□ 2.63
FAAP20-209ENST00000428120 BRD4O60885 1362 aaPredicted RBP31.48■■■□□ 2.63
FAAP20-209ENST00000428120 CENPJQ9HC77 1338 aaPredicted RBP31.47■■■□□ 2.63
FAAP20-209ENST00000428120 KDM5AP29375 1690 aaKnown RBP31.45■■■□□ 2.63
FAAP20-209ENST00000428120 ZBED9Q6R2W3 1325 aa31.45■■■□□ 2.63
FAAP20-209ENST00000428120 SENP3-EIF4A1A0A087X0R7 540 aa31.45■■■□□ 2.63
FAAP20-209ENST00000428120 MYOM1P52179 1685 aa31.44■■■□□ 2.62
FAAP20-209ENST00000428120 MYO3AQ8NEV4 1616 aa31.44■■■□□ 2.62
FAAP20-209ENST00000428120 NLRP13Q86W25 1043 aa31.44■■■□□ 2.62
FAAP20-209ENST00000428120 KNSTRNQ9Y448 316 aa31.43■■■□□ 2.62
FAAP20-209ENST00000428120 STAG3Q9UJ98 1225 aa31.42■■■□□ 2.62
FAAP20-209ENST00000428120 FKBP8Q14318 412 aa31.42■■■□□ 2.62
FAAP20-209ENST00000428120 SLC24A1O60721 1099 aa31.4■■■□□ 2.62
FAAP20-209ENST00000428120 SBNO2Q9Y2G9 1366 aa31.38■■■□□ 2.61
FAAP20-209ENST00000428120 ESF1Q9H501 851 aaKnown RBP31.37■■■□□ 2.61
FAAP20-209ENST00000428120 ZFYVE9O95405 1425 aa31.37■■■□□ 2.61
FAAP20-209ENST00000428120 QRICH2Q9H0J4 1663 aa31.37■■■□□ 2.61
FAAP20-209ENST00000428120 AMER1Q5JTC6 1135 aaPredicted RBP31.35■■■□□ 2.61
FAAP20-209ENST00000428120 SPATA31D1Q6ZQQ2 1576 aa31.34■■■□□ 2.61
FAAP20-209ENST00000428120 NEFLP07196 543 aa31.33■■■□□ 2.61
FAAP20-209ENST00000428120 LRPPRCP42704 1394 aaKnown RBP31.33■■■□□ 2.61
FAAP20-209ENST00000428120 STK26Q9P289 416 aa31.32■■■□□ 2.6
FAAP20-209ENST00000428120 BCANQ96GW7 911 aa31.32■■■□□ 2.6
FAAP20-209ENST00000428120 ZMYM3Q14202 1370 aa31.3■■■□□ 2.6
FAAP20-209ENST00000428120 SAFB2Q14151 953 aaKnown RBP eCLIP31.3■■■□□ 2.6
FAAP20-209ENST00000428120 ASXL1Q8IXJ9 1541 aa31.3■■■□□ 2.6
FAAP20-209ENST00000428120 ARHGEF28Q8N1W1 1705 aaKnown RBP31.29■■■□□ 2.6
FAAP20-209ENST00000428120 A2ML1A8K2U0 1454 aa31.27■■■□□ 2.6
FAAP20-209ENST00000428120 CARD14Q9BXL6 1004 aa31.26■■■□□ 2.59
FAAP20-209ENST00000428120 TRHP20396 242 aaPredicted RBP31.24■■■□□ 2.59
FAAP20-209ENST00000428120 PPP2R1AP30153 589 aa31.23■■■□□ 2.59
FAAP20-209ENST00000428120 SLC12A5Q9H2X9 1139 aa31.21■■■□□ 2.59
FAAP20-209ENST00000428120 RIMS2Q9UQ26 1411 aa31.19■■■□□ 2.58
FAAP20-209ENST00000428120 ALKQ9UM73 1620 aa31.19■■■□□ 2.58
FAAP20-209ENST00000428120 TULP4Q9NRJ4 1543 aa31.18■■■□□ 2.58
FAAP20-209ENST00000428120 EVC2Q86UK5 1308 aa31.18■■■□□ 2.58
FAAP20-209ENST00000428120 IRX6P78412 446 aaPredicted RBP31.18■■■□□ 2.58
FAAP20-209ENST00000428120 YTHDC2Q9H6S0 1430 aaKnown RBP31.17■■■□□ 2.58
FAAP20-209ENST00000428120 NPC1L1Q9UHC9 1359 aa31.17■■■□□ 2.58
FAAP20-209ENST00000428120 SALL2Q9Y467 1007 aaPredicted RBP31.15■■■□□ 2.58
FAAP20-209ENST00000428120 CABP2Q9NPB3 220 aa31.15■■■□□ 2.58
FAAP20-209ENST00000428120 PRAM1Q96QH2 718 aa31.14■■■□□ 2.58
FAAP20-209ENST00000428120 PTPRMP28827 1452 aa31.13■■■□□ 2.57
FAAP20-209ENST00000428120 TNRQ92752 1358 aa31.13■■■□□ 2.57
FAAP20-209ENST00000428120 NSD3Q9BZ95 1437 aa31.12■■■□□ 2.57
FAAP20-209ENST00000428120 POGKQ9P215 609 aa31.11■■■□□ 2.57
FAAP20-209ENST00000428120 MINK1Q8N4C8 1332 aaPredicted RBP31.11■■■□□ 2.57
FAAP20-209ENST00000428120 SMG6Q86US8 1419 aaKnown RBP31.1■■■□□ 2.57
FAAP20-209ENST00000428120 CEBPAP49715 358 aaPredicted RBP31.08■■■□□ 2.57
FAAP20-209ENST00000428120 NUDCQ9Y266 331 aa31.08■■■□□ 2.57
FAAP20-209ENST00000428120 SRPK2P78362 688 aaKnown RBP31.07■■■□□ 2.56
FAAP20-209ENST00000428120 PLPPR3Q6T4P5 718 aa31.06■■■□□ 2.56
FAAP20-209ENST00000428120 ADAMTS8Q9UP79 889 aa31.06■■■□□ 2.56
FAAP20-209ENST00000428120 BLMP54132 1417 aaPredicted RBP31.03■■■□□ 2.56
FAAP20-209ENST00000428120 PUS7Q96PZ0 661 aaKnown RBP31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms