RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
SH3D19-204ENST00000427414 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
SH3D19-204ENST00000427414 CLTCQ00610 1675 aaKnown RBP11.85□□□□□ -0.51
SH3D19-204ENST00000427414 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
SH3D19-204ENST00000427414 CCER2I3L3R5 266 aa11.84□□□□□ -0.51
SH3D19-204ENST00000427414 SCAF11Q99590 1463 aaKnown RBP11.84□□□□□ -0.51
SH3D19-204ENST00000427414 GGT6Q6P531 493 aa11.83□□□□□ -0.51
SH3D19-204ENST00000427414 DNAJC5Q9H3Z4 198 aa11.83□□□□□ -0.51
SH3D19-204ENST00000427414 NEXMIFQ5QGS0 1516 aa11.83□□□□□ -0.52
SH3D19-204ENST00000427414 CARD11Q9BXL7 1154 aa11.83□□□□□ -0.52
SH3D19-204ENST00000427414 EIF3AQ14152 1382 aaKnown RBP11.83□□□□□ -0.52
SH3D19-204ENST00000427414 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
SH3D19-204ENST00000427414 KTN1Q86UP2 1357 aaKnown RBP11.82□□□□□ -0.52
SH3D19-204ENST00000427414 SBNO2Q9Y2G9 1366 aa11.82□□□□□ -0.52
SH3D19-204ENST00000427414 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
SH3D19-204ENST00000427414 BCANQ96GW7 911 aa11.79□□□□□ -0.52
SH3D19-204ENST00000427414 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-204ENST00000427414 KIF7Q2M1P5 1343 aa11.78□□□□□ -0.52
SH3D19-204ENST00000427414 CDCA8Q53HL2 280 aa11.78□□□□□ -0.52
SH3D19-204ENST00000427414 ANP32CO43423 234 aa11.77□□□□□ -0.52
SH3D19-204ENST00000427414 RGL3Q3MIN7 710 aa11.77□□□□□ -0.52
SH3D19-204ENST00000427414 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.52
SH3D19-204ENST00000427414 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.52
SH3D19-204ENST00000427414 ADGRB1O14514 1584 aa11.77□□□□□ -0.53
SH3D19-204ENST00000427414 NLRP1Q9C000 1473 aa11.77□□□□□ -0.53
SH3D19-204ENST00000427414 PRKCSHP14314 528 aaPredicted RBP11.76□□□□□ -0.53
SH3D19-204ENST00000427414 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
SH3D19-204ENST00000427414 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
SH3D19-204ENST00000427414 ZMYM3Q14202 1370 aa11.74□□□□□ -0.53
SH3D19-204ENST00000427414 FKBP8Q14318 412 aa11.74□□□□□ -0.53
SH3D19-204ENST00000427414 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 TESK2Q96S53 571 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
SH3D19-204ENST00000427414 TMF1P82094 1093 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 IDI1Q13907 227 aa11.73□□□□□ -0.53
SH3D19-204ENST00000427414 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
SH3D19-204ENST00000427414 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
SH3D19-204ENST00000427414 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.72□□□□□ -0.53
SH3D19-204ENST00000427414 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
SH3D19-204ENST00000427414 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
SH3D19-204ENST00000427414 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
SH3D19-204ENST00000427414 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
SH3D19-204ENST00000427414 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
SH3D19-204ENST00000427414 C3P01024 1663 aa11.7□□□□□ -0.54
SH3D19-204ENST00000427414 ADGRF5Q8IZF2 1346 aa11.7□□□□□ -0.54
SH3D19-204ENST00000427414 ARHGEF28Q8N1W1 1705 aaKnown RBP11.7□□□□□ -0.54
SH3D19-204ENST00000427414 SETD1AO15047 1707 aaKnown RBP11.7□□□□□ -0.54
SH3D19-204ENST00000427414 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
SH3D19-204ENST00000427414 TNRQ92752 1358 aa11.69□□□□□ -0.54
SH3D19-204ENST00000427414 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
SH3D19-204ENST00000427414 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
SH3D19-204ENST00000427414 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
SH3D19-204ENST00000427414 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
SH3D19-204ENST00000427414 SLIT1O75093 1534 aa11.68□□□□□ -0.54
SH3D19-204ENST00000427414 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
SH3D19-204ENST00000427414 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
SH3D19-204ENST00000427414 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
SH3D19-204ENST00000427414 INSRP06213 1382 aa11.67□□□□□ -0.54
SH3D19-204ENST00000427414 NEFLP07196 543 aa11.67□□□□□ -0.54
SH3D19-204ENST00000427414 NINLQ9Y2I6 1382 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 DIP2AQ14689 1571 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 RALBP1Q15311 655 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 MYOM1P52179 1685 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 USP32Q8NFA0 1604 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
SH3D19-204ENST00000427414 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.54
SH3D19-204ENST00000427414 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.54
SH3D19-204ENST00000427414 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
SH3D19-204ENST00000427414 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
SH3D19-204ENST00000427414 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
SH3D19-204ENST00000427414 TECPR2O15040 1411 aa11.63□□□□□ -0.55
SH3D19-204ENST00000427414 DISP3Q9P2K9 1392 aa11.63□□□□□ -0.55
SH3D19-204ENST00000427414 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
SH3D19-204ENST00000427414 TRHP20396 242 aaPredicted RBP11.63□□□□□ -0.55
SH3D19-204ENST00000427414 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
SH3D19-204ENST00000427414 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
SH3D19-204ENST00000427414 TMEM2Q9UHN6 1383 aa11.62□□□□□ -0.55
SH3D19-204ENST00000427414 FAM135BQ49AJ0 1406 aa11.62□□□□□ -0.55
SH3D19-204ENST00000427414 LRPPRCP42704 1394 aaKnown RBP11.62□□□□□ -0.55
SH3D19-204ENST00000427414 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
SH3D19-204ENST00000427414 CPS1P31327 1500 aa11.61□□□□□ -0.55
SH3D19-204ENST00000427414 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
SH3D19-204ENST00000427414 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
SH3D19-204ENST00000427414 PTPRMP28827 1452 aa11.61□□□□□ -0.55
SH3D19-204ENST00000427414 YTHDC2Q9H6S0 1430 aaKnown RBP11.61□□□□□ -0.55
SH3D19-204ENST00000427414 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
SH3D19-204ENST00000427414 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
SH3D19-204ENST00000427414 MED14O60244 1454 aa11.6□□□□□ -0.55
SH3D19-204ENST00000427414 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
SH3D19-204ENST00000427414 MYBBP1AQ9BQG0 1328 aaKnown RBP11.58□□□□□ -0.56
SH3D19-204ENST00000427414 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
SH3D19-204ENST00000427414 EVC2Q86UK5 1308 aa11.57□□□□□ -0.56
SH3D19-204ENST00000427414 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
SH3D19-204ENST00000427414 CEP170BQ9Y4F5 1589 aaPredicted RBP11.56□□□□□ -0.56
SH3D19-204ENST00000427414 SETD1BQ9UPS6 1966 aaKnown RBP11.56□□□□□ -0.56
SH3D19-204ENST00000427414 RIMS1Q86UR5 1692 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms