RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.75□□□□□ -1.49
PTPRC-208ENST00000427110 SLC10A3P09131 477 aa5.74□□□□□ -1.49
PTPRC-208ENST00000427110 COPS2P61201 443 aa5.74□□□□□ -1.49
PTPRC-208ENST00000427110 MAP2K5Q13163 448 aa5.74□□□□□ -1.49
PTPRC-208ENST00000427110 NYAP1Q6ZVC0 841 aa5.74□□□□□ -1.49
PTPRC-208ENST00000427110 MTRQ99707 1265 aa5.74□□□□□ -1.49
PTPRC-208ENST00000427110 CFHP08603 1231 aa5.73□□□□□ -1.49
PTPRC-208ENST00000427110 TJAP1Q5JTD0 557 aa5.73□□□□□ -1.49
PTPRC-208ENST00000427110 ZNF516Q92618 1163 aa5.73□□□□□ -1.49
PTPRC-208ENST00000427110 CCDC102AQ96A19 550 aa5.73□□□□□ -1.49
PTPRC-208ENST00000427110 DDX11L8A8MPP1 907 aa5.72□□□□□ -1.49
PTPRC-208ENST00000427110 IRF6O14896 467 aa5.72□□□□□ -1.49
PTPRC-208ENST00000427110 ITGBL1O95965 494 aaPredicted RBP5.72□□□□□ -1.49
PTPRC-208ENST00000427110 SLC4A3P48751 1232 aa5.72□□□□□ -1.49
PTPRC-208ENST00000427110 KCNC4Q03721 635 aa5.72□□□□□ -1.49
PTPRC-208ENST00000427110 ZC3H15Q8WU90 426 aaKnown RBP5.72□□□□□ -1.49
PTPRC-208ENST00000427110 MDM2Q00987 491 aaPredicted RBP5.71□□□□□ -1.5
PTPRC-208ENST00000427110 KRI1Q8N9T8 703 aaKnown RBP5.71□□□□□ -1.5
PTPRC-208ENST00000427110 RDH13Q8NBN7 331 aa5.71□□□□□ -1.5
PTPRC-208ENST00000427110 A0A0G2JS52 829 aa5.7□□□□□ -1.5
PTPRC-208ENST00000427110 BLOC1S3Q6QNY0 202 aa5.7□□□□□ -1.5
PTPRC-208ENST00000427110 NKX2-3Q8TAU0 364 aa5.7□□□□□ -1.5
PTPRC-208ENST00000427110 BCANQ96GW7 911 aa5.7□□□□□ -1.5
PTPRC-208ENST00000427110 DAXXQ9UER7 740 aaPredicted RBP5.7□□□□□ -1.5
PTPRC-208ENST00000427110 PCDHB3Q9Y5E6 796 aa5.7□□□□□ -1.5
PTPRC-208ENST00000427110 MINK1Q8N4C8 1332 aaPredicted RBP5.7□□□□□ -1.5
PTPRC-208ENST00000427110 TLL1O43897 1013 aa5.69□□□□□ -1.5
PTPRC-208ENST00000427110 ZMYND10O75800 440 aa5.69□□□□□ -1.5
PTPRC-208ENST00000427110 PUS10Q3MIT2 529 aaKnown RBP5.69□□□□□ -1.5
PTPRC-208ENST00000427110 BARGINQ6ZT62 677 aa5.69□□□□□ -1.5
PTPRC-208ENST00000427110 IL21Q9HBE4 155 aa5.69□□□□□ -1.5
PTPRC-208ENST00000427110 KMT5BQ4FZB7 885 aa5.68□□□□□ -1.5
PTPRC-208ENST00000427110 IFFO2Q5TF58 517 aa5.68□□□□□ -1.5
PTPRC-208ENST00000427110 ACTN4O43707 911 aaKnown RBP5.67□□□□□ -1.5
PTPRC-208ENST00000427110 NECTIN2Q92692 538 aa5.67□□□□□ -1.5
PTPRC-208ENST00000427110 REPIN1Q9BWE0 567 aaKnown RBP5.67□□□□□ -1.5
PTPRC-208ENST00000427110 FUT2Q10981 343 aa5.66□□□□□ -1.5
PTPRC-208ENST00000427110 PRR14Q9BWN1 585 aa5.66□□□□□ -1.5
PTPRC-208ENST00000427110 ZPR1O75312 459 aa5.65□□□□□ -1.5
PTPRC-208ENST00000427110 GCGRP47871 477 aa5.64□□□□□ -1.51
PTPRC-208ENST00000427110 TTLL12Q14166 644 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-208ENST00000427110 RSPH4AQ5TD94 716 aa5.64□□□□□ -1.51
PTPRC-208ENST00000427110 PPP1R18Q6NYC8 613 aa5.64□□□□□ -1.51
PTPRC-208ENST00000427110 SULF1Q8IWU6 871 aa5.64□□□□□ -1.51
PTPRC-208ENST00000427110 CD46P15529 392 aa5.63□□□□□ -1.51
PTPRC-208ENST00000427110 HLA-CQ95604 372 aa5.63□□□□□ -1.51
PTPRC-208ENST00000427110 SLC24A3Q9HC58 644 aa5.63□□□□□ -1.51
PTPRC-208ENST00000427110 GPCPD1Q9NPB8 672 aa5.63□□□□□ -1.51
PTPRC-208ENST00000427110 TRIM66O15016 1216 aa5.62□□□□□ -1.51
PTPRC-208ENST00000427110 CLCN1P35523 988 aa5.62□□□□□ -1.51
PTPRC-208ENST00000427110 SCUBE3Q8IX30 993 aa5.62□□□□□ -1.51
PTPRC-208ENST00000427110 TMUB1Q9BVT8 246 aa5.62□□□□□ -1.51
PTPRC-208ENST00000427110 FAM217BQ9NTX9 383 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-208ENST00000427110 PPEF1O14829 653 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-208ENST00000427110 NR1I2O75469 434 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 S1PR4O95977 384 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 ATP6V1AP38606 617 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 GUCA2AQ02747 115 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 MORN1Q5T089 497 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 GIGYF2Q6Y7W6 1299 aaKnown RBP5.61□□□□□ -1.51
PTPRC-208ENST00000427110 SLC27A5Q9Y2P5 690 aa5.61□□□□□ -1.51
PTPRC-208ENST00000427110 AMHR2Q16671 573 aa5.6□□□□□ -1.51
PTPRC-208ENST00000427110 PARP9Q8IXQ6 854 aa5.6□□□□□ -1.51
PTPRC-208ENST00000427110 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.6□□□□□ -1.51
PTPRC-208ENST00000427110 KDM4AO75164 1064 aa5.59□□□□□ -1.51
PTPRC-208ENST00000427110 ADH1BP00325 375 aa5.59□□□□□ -1.51
PTPRC-208ENST00000427110 SSTR3P32745 418 aaPredicted RBP5.59□□□□□ -1.51
PTPRC-208ENST00000427110 RNF19BQ6ZMZ0 732 aa5.59□□□□□ -1.51
PTPRC-208ENST00000427110 AK7Q96M32 723 aa5.59□□□□□ -1.51
PTPRC-208ENST00000427110 PRDM9Q9NQV7 894 aa5.59□□□□□ -1.51
PTPRC-208ENST00000427110 RNF223E7ERA6 249 aa5.58□□□□□ -1.52
PTPRC-208ENST00000427110 SPSB2Q99619 263 aa5.58□□□□□ -1.52
PTPRC-208ENST00000427110 PRKD2Q9BZL6 878 aa5.58□□□□□ -1.52
PTPRC-208ENST00000427110 HOXA2O43364 376 aa5.57□□□□□ -1.52
PTPRC-208ENST00000427110 MS4A1P11836 297 aa5.57□□□□□ -1.52
PTPRC-208ENST00000427110 PDE4DQ08499 809 aa5.57□□□□□ -1.52
PTPRC-208ENST00000427110 THAP11Q96EK4 314 aa5.57□□□□□ -1.52
PTPRC-208ENST00000427110 SLC6A16Q9GZN6 736 aa5.57□□□□□ -1.52
PTPRC-208ENST00000427110 GGCXP38435 758 aa5.56□□□□□ -1.52
PTPRC-208ENST00000427110 NUTM1Q86Y26 1132 aa5.56□□□□□ -1.52
PTPRC-208ENST00000427110 FAM160A2Q8N612 972 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-208ENST00000427110 SYMPKQ92797 1274 aaKnown RBP5.56□□□□□ -1.52
PTPRC-208ENST00000427110 EMID1Q96A84 441 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-208ENST00000427110 BEGAINQ9BUH8 593 aa5.56□□□□□ -1.52
PTPRC-208ENST00000427110 NDUFV2P19404 249 aa5.55□□□□□ -1.52
PTPRC-208ENST00000427110 PLA2G2CQ5R387 149 aa5.55□□□□□ -1.52
PTPRC-208ENST00000427110 BRICD5Q6PL45 260 aa5.55□□□□□ -1.52
PTPRC-208ENST00000427110 RGS20O76081 388 aa5.54□□□□□ -1.52
PTPRC-208ENST00000427110 FMNL1O95466 1100 aaPredicted RBP5.54□□□□□ -1.52
PTPRC-208ENST00000427110 GRIPAP1Q4V328 841 aa5.54□□□□□ -1.52
PTPRC-208ENST00000427110 SPIRE2Q8WWL2 714 aa5.54□□□□□ -1.52
PTPRC-208ENST00000427110 PCDHGC3Q9UN70 934 aa5.54□□□□□ -1.52
PTPRC-208ENST00000427110 MOXD2PA6NHM9 499 aa5.53□□□□□ -1.52
PTPRC-208ENST00000427110 USP46P62068 366 aa5.53□□□□□ -1.52
PTPRC-208ENST00000427110 GPBP1L1Q9HC44 474 aaPredicted RBP5.53□□□□□ -1.52
PTPRC-208ENST00000427110 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
PTPRC-208ENST00000427110 FDX1P10109 184 aa5.52□□□□□ -1.53
PTPRC-208ENST00000427110 Q3C1V9 767 aa5.52□□□□□ -1.53
PTPRC-208ENST00000427110 LIAT1Q6ZQX7 453 aa5.52□□□□□ -1.53
PTPRC-208ENST00000427110 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms