RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 WBP1LQ9NX94 342 aa13.33□□□□□ -0.28
LINC01953-201ENST00000426870 TMEM134Q9H6X4 195 aa13.32□□□□□ -0.28
LINC01953-201ENST00000426870 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
LINC01953-201ENST00000426870 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
LINC01953-201ENST00000426870 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
LINC01953-201ENST00000426870 IRF6O14896 467 aa13.27□□□□□ -0.29
LINC01953-201ENST00000426870 ZC3H15Q8WU90 426 aaKnown RBP13.27□□□□□ -0.29
LINC01953-201ENST00000426870 PRR14Q9BWN1 585 aa13.26□□□□□ -0.29
LINC01953-201ENST00000426870 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
LINC01953-201ENST00000426870 ZMYND10O75800 440 aa13.23□□□□□ -0.29
LINC01953-201ENST00000426870 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
LINC01953-201ENST00000426870 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
LINC01953-201ENST00000426870 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
LINC01953-201ENST00000426870 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
LINC01953-201ENST00000426870 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
LINC01953-201ENST00000426870 RDH13Q8NBN7 331 aa13.17□□□□□ -0.3
LINC01953-201ENST00000426870 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
LINC01953-201ENST00000426870 NLRP7Q8WX94 980 aa13.16□□□□□ -0.3
LINC01953-201ENST00000426870 APLP1P51693 650 aa13.15□□□□□ -0.3
LINC01953-201ENST00000426870 KCNC4Q03721 635 aa13.15□□□□□ -0.3
LINC01953-201ENST00000426870 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
LINC01953-201ENST00000426870 CFHP08603 1231 aa13.14□□□□□ -0.31
LINC01953-201ENST00000426870 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
LINC01953-201ENST00000426870 CLCN1P35523 988 aa13.13□□□□□ -0.31
LINC01953-201ENST00000426870 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
LINC01953-201ENST00000426870 PCDHB3Q9Y5E6 796 aa13.12□□□□□ -0.31
LINC01953-201ENST00000426870 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
LINC01953-201ENST00000426870 IL21Q9HBE4 155 aa13.11□□□□□ -0.31
LINC01953-201ENST00000426870 SLC10A3P09131 477 aa13.1□□□□□ -0.31
LINC01953-201ENST00000426870 AK7Q96M32 723 aa13.1□□□□□ -0.31
LINC01953-201ENST00000426870 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
LINC01953-201ENST00000426870 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
LINC01953-201ENST00000426870 MTRQ99707 1265 aa13.09□□□□□ -0.31
LINC01953-201ENST00000426870 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
LINC01953-201ENST00000426870 COPS2P61201 443 aa13.06□□□□□ -0.32
LINC01953-201ENST00000426870 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
LINC01953-201ENST00000426870 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
LINC01953-201ENST00000426870 NR1I2O75469 434 aa13.02□□□□□ -0.33
LINC01953-201ENST00000426870 GCGRP47871 477 aa13.02□□□□□ -0.33
LINC01953-201ENST00000426870 AMHR2Q16671 573 aa13.02□□□□□ -0.33
LINC01953-201ENST00000426870 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.33
LINC01953-201ENST00000426870 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
LINC01953-201ENST00000426870 TRIM66O15016 1216 aa13□□□□□ -0.33
LINC01953-201ENST00000426870 CD46P15529 392 aa13□□□□□ -0.33
LINC01953-201ENST00000426870 ZPR1O75312 459 aa12.99□□□□□ -0.33
LINC01953-201ENST00000426870 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
LINC01953-201ENST00000426870 A0A0G2JS52 829 aa12.98□□□□□ -0.33
LINC01953-201ENST00000426870 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
LINC01953-201ENST00000426870 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
LINC01953-201ENST00000426870 SSTR3P32745 418 aaPredicted RBP12.96□□□□□ -0.33
LINC01953-201ENST00000426870 FUT2Q10981 343 aa12.96□□□□□ -0.33
LINC01953-201ENST00000426870 KDM4AO75164 1064 aa12.95□□□□□ -0.34
LINC01953-201ENST00000426870 GGCXP38435 758 aa12.95□□□□□ -0.34
LINC01953-201ENST00000426870 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
LINC01953-201ENST00000426870 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
LINC01953-201ENST00000426870 USP46P62068 366 aa12.94□□□□□ -0.34
LINC01953-201ENST00000426870 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
LINC01953-201ENST00000426870 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
LINC01953-201ENST00000426870 PDE4DQ08499 809 aa12.92□□□□□ -0.34
LINC01953-201ENST00000426870 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
LINC01953-201ENST00000426870 REPIN1Q9BWE0 567 aaKnown RBP12.91□□□□□ -0.34
LINC01953-201ENST00000426870 RGS20O76081 388 aa12.9□□□□□ -0.34
LINC01953-201ENST00000426870 MORN1Q5T089 497 aa12.9□□□□□ -0.34
LINC01953-201ENST00000426870 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
LINC01953-201ENST00000426870 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
LINC01953-201ENST00000426870 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
LINC01953-201ENST00000426870 ADH1BP00325 375 aa12.87□□□□□ -0.35
LINC01953-201ENST00000426870 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
LINC01953-201ENST00000426870 TLL1O43897 1013 aa12.86□□□□□ -0.35
LINC01953-201ENST00000426870 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
LINC01953-201ENST00000426870 Q3C1V9 767 aa12.86□□□□□ -0.35
LINC01953-201ENST00000426870 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
LINC01953-201ENST00000426870 SPSB2Q99619 263 aa12.85□□□□□ -0.35
LINC01953-201ENST00000426870 BEGAINQ9BUH8 593 aa12.85□□□□□ -0.35
LINC01953-201ENST00000426870 SLC27A5Q9Y2P5 690 aa12.85□□□□□ -0.35
LINC01953-201ENST00000426870 HOXA2O43364 376 aa12.83□□□□□ -0.36
LINC01953-201ENST00000426870 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
LINC01953-201ENST00000426870 SLC6A16Q9GZN6 736 aa12.82□□□□□ -0.36
LINC01953-201ENST00000426870 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
LINC01953-201ENST00000426870 MS4A1P11836 297 aa12.79□□□□□ -0.36
LINC01953-201ENST00000426870 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
LINC01953-201ENST00000426870 S1PR4O95977 384 aa12.78□□□□□ -0.36
LINC01953-201ENST00000426870 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
LINC01953-201ENST00000426870 FDX1P10109 184 aa12.76□□□□□ -0.37
LINC01953-201ENST00000426870 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
LINC01953-201ENST00000426870 RNF19BQ6ZMZ0 732 aa12.75□□□□□ -0.37
LINC01953-201ENST00000426870 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
LINC01953-201ENST00000426870 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
LINC01953-201ENST00000426870 HLA-CQ95604 372 aa12.74□□□□□ -0.37
LINC01953-201ENST00000426870 ANKLE1Q8NAG6 615 aa12.73□□□□□ -0.37
LINC01953-201ENST00000426870 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
LINC01953-201ENST00000426870 GUCA2AQ02747 115 aa12.72□□□□□ -0.37
LINC01953-201ENST00000426870 MSS51Q4VC12 460 aa12.72□□□□□ -0.37
LINC01953-201ENST00000426870 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
LINC01953-201ENST00000426870 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
LINC01953-201ENST00000426870 PRKD2Q9BZL6 878 aa12.71□□□□□ -0.37
LINC01953-201ENST00000426870 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
LINC01953-201ENST00000426870 NDUFV2P19404 249 aa12.7□□□□□ -0.38
LINC01953-201ENST00000426870 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
LINC01953-201ENST00000426870 PPEF1O14829 653 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms