RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 MAGI2Q86UL8 1455 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 ARHGEF40Q8TER5 1519 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 DIP2CQ9Y2E4 1556 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 ST18O60284 1047 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 RTEL1-TNFRSF6BF6WH68 1400 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
HERPUD2-204ENST00000426180 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 CROCC2H7BZ55 1655 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 SIGLEC1Q9BZZ2 1709 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 RRP7BPQ9NSQ0 103 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 ATP10AO60312 1499 aa8.69□□□□□ -1.02
HERPUD2-204ENST00000426180 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
HERPUD2-204ENST00000426180 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
HERPUD2-204ENST00000426180 ADGRL2O95490 1459 aa8.67□□□□□ -1.02
HERPUD2-204ENST00000426180 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
HERPUD2-204ENST00000426180 NCOA1Q15788 1441 aa8.67□□□□□ -1.02
HERPUD2-204ENST00000426180 KIF15Q9NS87 1388 aa8.67□□□□□ -1.02
HERPUD2-204ENST00000426180 A2MP01023 1474 aa8.66□□□□□ -1.02
HERPUD2-204ENST00000426180 DHX29Q7Z478 1369 aaKnown RBP8.66□□□□□ -1.02
HERPUD2-204ENST00000426180 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
HERPUD2-204ENST00000426180 ADGBQ8N7X0 1667 aa8.65□□□□□ -1.02
HERPUD2-204ENST00000426180 PLXNC1O60486 1568 aa8.65□□□□□ -1.02
HERPUD2-204ENST00000426180 ROCK1Q13464 1354 aa8.65□□□□□ -1.02
HERPUD2-204ENST00000426180 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.02
HERPUD2-204ENST00000426180 SNPHO15079 494 aa8.65□□□□□ -1.02
HERPUD2-204ENST00000426180 PSEN1P49768 467 aa8.64□□□□□ -1.03
HERPUD2-204ENST00000426180 MLECQ14165 292 aa8.64□□□□□ -1.03
HERPUD2-204ENST00000426180 REREQ9P2R6 1566 aa8.64□□□□□ -1.03
HERPUD2-204ENST00000426180 KIF3BO15066 747 aa8.63□□□□□ -1.03
HERPUD2-204ENST00000426180 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
HERPUD2-204ENST00000426180 AGLP35573 1532 aa8.63□□□□□ -1.03
HERPUD2-204ENST00000426180 DUOX2Q9NRD8 1548 aa8.63□□□□□ -1.03
HERPUD2-204ENST00000426180 NAIPQ13075 1403 aa8.63□□□□□ -1.03
HERPUD2-204ENST00000426180 PDCD7Q8N8D1 485 aaKnown RBP8.62□□□□□ -1.03
HERPUD2-204ENST00000426180 KDM4FA0A1W2PPD8 638 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 TRIM26Q12899 539 aaPredicted RBP8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 GGT6Q6P531 493 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 TMEM121BQ9BXQ6 578 aaPredicted RBP8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.037e-8■■□□□ 12.6
HERPUD2-204ENST00000426180 HFM1A2PYH4 1435 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
HERPUD2-204ENST00000426180 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
HERPUD2-204ENST00000426180 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
HERPUD2-204ENST00000426180 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
HERPUD2-204ENST00000426180 MROH1Q8NDA8 1641 aa8.59□□□□□ -1.03
HERPUD2-204ENST00000426180 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
HERPUD2-204ENST00000426180 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
HERPUD2-204ENST00000426180 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
HERPUD2-204ENST00000426180 SETD5Q9C0A6 1442 aa8.57□□□□□ -1.04
HERPUD2-204ENST00000426180 ADAMTSL3P82987 1691 aa8.57□□□□□ -1.04
HERPUD2-204ENST00000426180 GCC2Q8IWJ2 1684 aa8.57□□□□□ -1.04
HERPUD2-204ENST00000426180 MADDQ8WXG6 1647 aa8.57□□□□□ -1.04
HERPUD2-204ENST00000426180 RNF17Q9BXT8 1623 aaKnown RBP8.57□□□□□ -1.04
HERPUD2-204ENST00000426180 RAB3GAP2Q9H2M9 1393 aa8.56□□□□□ -1.04
HERPUD2-204ENST00000426180 CEBPAP49715 358 aaPredicted RBP8.55□□□□□ -1.04
HERPUD2-204ENST00000426180 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
HERPUD2-204ENST00000426180 PCGF6Q9BYE7 350 aa8.55□□□□□ -1.04
HERPUD2-204ENST00000426180 VWDEQ8N2E2 1590 aa8.55□□□□□ -1.04
HERPUD2-204ENST00000426180 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 ABCC3O15438 1527 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 PRDM15P57071 1507 aaPredicted RBP8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 DEPDC5O75140 1603 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 UNC13BO14795 1591 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 NUP155O75694 1391 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 KDM5DQ9BY66 1539 aa8.54□□□□□ -1.04
HERPUD2-204ENST00000426180 RIMS1Q86UR5 1692 aaKnown RBP8.53□□□□□ -1.04
HERPUD2-204ENST00000426180 PTPRMP28827 1452 aa8.53□□□□□ -1.04
HERPUD2-204ENST00000426180 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
HERPUD2-204ENST00000426180 CABP2Q9NPB3 220 aa8.53□□□□□ -1.04
HERPUD2-204ENST00000426180 CLTCQ00610 1675 aaKnown RBP8.53□□□□□ -1.04
HERPUD2-204ENST00000426180 PZPP20742 1482 aa8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 ZMYM3Q14202 1370 aa8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 KANK1Q14678 1352 aa8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
HERPUD2-204ENST00000426180 LMTK2Q8IWU2 1503 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 DPY19L2Q6NUT2 758 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 CNTLNQ9NXG0 1405 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 CEP152O94986 1710 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 IQGAP3Q86VI3 1631 aa8.51□□□□□ -1.05
HERPUD2-204ENST00000426180 G3V3G9 751 aa8.5□□□□□ -1.05
HERPUD2-204ENST00000426180 NPATQ14207 1427 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 HRCP23327 699 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 PKD2Q13563 968 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 CAMSAP1Q5T5Y3 1602 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 C3P01024 1663 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 EFCAB6Q5THR3 1501 aa8.49□□□□□ -1.05
HERPUD2-204ENST00000426180 MPHOSPH9Q99550 1183 aa8.48□□□□□ -1.05
HERPUD2-204ENST00000426180 BOLA1Q9Y3E2 137 aa8.48□□□□□ -1.05
HERPUD2-204ENST00000426180 MROH2AA6NES4 1674 aa8.48□□□□□ -1.05
HERPUD2-204ENST00000426180 ZC3H13Q5T200 1668 aaKnown RBP8.48□□□□□ -1.05
HERPUD2-204ENST00000426180 ARHGAP31Q2M1Z3 1444 aa8.47□□□□□ -1.05
HERPUD2-204ENST00000426180 TET3O43151 1660 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms