RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ANP32CO43423 234 aa20.07■□□□□ 0.8
CDK3-201ENST00000425876 MLECQ14165 292 aa20.06■□□□□ 0.8
CDK3-201ENST00000425876 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
CDK3-201ENST00000425876 FER1L4A9Z1Z3 1794 aa20.06■□□□□ 0.8
CDK3-201ENST00000425876 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
CDK3-201ENST00000425876 PPLO60437 1756 aa20.02■□□□□ 0.8
CDK3-201ENST00000425876 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
CDK3-201ENST00000425876 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
CDK3-201ENST00000425876 IDI1Q13907 227 aa20.02■□□□□ 0.8
CDK3-201ENST00000425876 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
CDK3-201ENST00000425876 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
CDK3-201ENST00000425876 PTPRMP28827 1452 aa20.01■□□□□ 0.79
CDK3-201ENST00000425876 SCAF11Q99590 1463 aaKnown RBP20.01■□□□□ 0.79
CDK3-201ENST00000425876 IQGAP1P46940 1657 aa20■□□□□ 0.79
CDK3-201ENST00000425876 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
CDK3-201ENST00000425876 ZFYVE9O95405 1425 aa19.98■□□□□ 0.79
CDK3-201ENST00000425876 TESK2Q96S53 571 aa19.98■□□□□ 0.79
CDK3-201ENST00000425876 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
CDK3-201ENST00000425876 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
CDK3-201ENST00000425876 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
CDK3-201ENST00000425876 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
CDK3-201ENST00000425876 VGFO15240 615 aaPredicted RBP19.96■□□□□ 0.79
CDK3-201ENST00000425876 FBXO31Q5XUX0 539 aaPredicted RBP19.96■□□□□ 0.79
CDK3-201ENST00000425876 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
CDK3-201ENST00000425876 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
CDK3-201ENST00000425876 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
CDK3-201ENST00000425876 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
CDK3-201ENST00000425876 C14orf93Q9H972 538 aaKnown RBP19.94■□□□□ 0.78
CDK3-201ENST00000425876 ZMYM3Q14202 1370 aa19.94■□□□□ 0.78
CDK3-201ENST00000425876 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
CDK3-201ENST00000425876 TMF1P82094 1093 aa19.92■□□□□ 0.78
CDK3-201ENST00000425876 C3P01024 1663 aa19.89■□□□□ 0.77
CDK3-201ENST00000425876 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
CDK3-201ENST00000425876 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
CDK3-201ENST00000425876 POLR3GLQ9BT43 218 aa19.88■□□□□ 0.77
CDK3-201ENST00000425876 DISP3Q9P2K9 1392 aa19.88■□□□□ 0.77
CDK3-201ENST00000425876 ADGRB1O14514 1584 aa19.88■□□□□ 0.77
CDK3-201ENST00000425876 PRKRIP1Q9H875 184 aaPredicted RBP19.87■□□□□ 0.77
CDK3-201ENST00000425876 MYO5BQ9ULV0 1848 aa19.87■□□□□ 0.77
CDK3-201ENST00000425876 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
CDK3-201ENST00000425876 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
CDK3-201ENST00000425876 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
CDK3-201ENST00000425876 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
CDK3-201ENST00000425876 CEBPAP49715 358 aaPredicted RBP19.85■□□□□ 0.77
CDK3-201ENST00000425876 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.77
CDK3-201ENST00000425876 TNRQ92752 1358 aa19.82■□□□□ 0.76
CDK3-201ENST00000425876 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
CDK3-201ENST00000425876 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
CDK3-201ENST00000425876 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
CDK3-201ENST00000425876 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
CDK3-201ENST00000425876 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
CDK3-201ENST00000425876 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDK3-201ENST00000425876 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
CDK3-201ENST00000425876 LMTK3Q96Q04 1460 aa19.75■□□□□ 0.75
CDK3-201ENST00000425876 PER1O15534 1290 aaPredicted RBP19.75■□□□□ 0.75
CDK3-201ENST00000425876 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
CDK3-201ENST00000425876 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
CDK3-201ENST00000425876 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
CDK3-201ENST00000425876 ASXL1Q8IXJ9 1541 aa19.74■□□□□ 0.75
CDK3-201ENST00000425876 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
CDK3-201ENST00000425876 RALBP1Q15311 655 aa19.72■□□□□ 0.75
CDK3-201ENST00000425876 PANK3Q9H999 370 aa19.71■□□□□ 0.75
CDK3-201ENST00000425876 PUS7Q96PZ0 661 aaKnown RBP19.7■□□□□ 0.74
CDK3-201ENST00000425876 UBR1Q8IWV7 1749 aa19.7■□□□□ 0.74
CDK3-201ENST00000425876 ARHGEF28Q8N1W1 1705 aaKnown RBP19.7■□□□□ 0.74
CDK3-201ENST00000425876 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
CDK3-201ENST00000425876 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
CDK3-201ENST00000425876 YTHDC2Q9H6S0 1430 aaKnown RBP19.69■□□□□ 0.74
CDK3-201ENST00000425876 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
CDK3-201ENST00000425876 MYOM1P52179 1685 aa19.67■□□□□ 0.74
CDK3-201ENST00000425876 PARD3Q8TEW0 1356 aa19.67■□□□□ 0.74
CDK3-201ENST00000425876 SETD1BQ9UPS6 1966 aaKnown RBP19.67■□□□□ 0.74
CDK3-201ENST00000425876 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
CDK3-201ENST00000425876 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
CDK3-201ENST00000425876 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
CDK3-201ENST00000425876 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
CDK3-201ENST00000425876 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
CDK3-201ENST00000425876 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
CDK3-201ENST00000425876 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
CDK3-201ENST00000425876 HSPA2P54652 639 aa19.63■□□□□ 0.73
CDK3-201ENST00000425876 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
CDK3-201ENST00000425876 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
CDK3-201ENST00000425876 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
CDK3-201ENST00000425876 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
CDK3-201ENST00000425876 ABCC11Q96J66 1382 aa19.61■□□□□ 0.73
CDK3-201ENST00000425876 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
CDK3-201ENST00000425876 SLIT1O75093 1534 aa19.61■□□□□ 0.73
CDK3-201ENST00000425876 STK26Q9P289 416 aa19.61■□□□□ 0.73
CDK3-201ENST00000425876 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
CDK3-201ENST00000425876 TULP4Q9NRJ4 1543 aa19.59■□□□□ 0.73
CDK3-201ENST00000425876 PLEKHG1Q9ULL1 1385 aa19.59■□□□□ 0.73
CDK3-201ENST00000425876 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.73
CDK3-201ENST00000425876 NLRP13Q86W25 1043 aa19.58■□□□□ 0.73
CDK3-201ENST00000425876 SIRT1Q96EB6 747 aa19.57■□□□□ 0.72
CDK3-201ENST00000425876 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
CDK3-201ENST00000425876 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
CDK3-201ENST00000425876 POGKQ9P215 609 aa19.57■□□□□ 0.72
CDK3-201ENST00000425876 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
CDK3-201ENST00000425876 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
CDK3-201ENST00000425876 TECPR2O15040 1411 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms