RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 CERKQ8TCT0 537 aa8.7□□□□□ -1.02
R3HDM1-205ENST00000425804 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
R3HDM1-205ENST00000425804 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-205ENST00000425804 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
R3HDM1-205ENST00000425804 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
R3HDM1-205ENST00000425804 TLL1O43897 1013 aa8.67□□□□□ -1.02
R3HDM1-205ENST00000425804 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
R3HDM1-205ENST00000425804 PCDHB3Q9Y5E6 796 aa8.67□□□□□ -1.02
R3HDM1-205ENST00000425804 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
R3HDM1-205ENST00000425804 PRIM1P49642 420 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-205ENST00000425804 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.02
R3HDM1-205ENST00000425804 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
R3HDM1-205ENST00000425804 S1PR4O95977 384 aa8.64□□□□□ -1.03
R3HDM1-205ENST00000425804 PDIA6Q15084 440 aa8.64□□□□□ -1.03
R3HDM1-205ENST00000425804 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
R3HDM1-205ENST00000425804 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
R3HDM1-205ENST00000425804 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
R3HDM1-205ENST00000425804 CDHR5Q9HBB8 845 aa8.61□□□□□ -1.03
R3HDM1-205ENST00000425804 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
R3HDM1-205ENST00000425804 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
R3HDM1-205ENST00000425804 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
R3HDM1-205ENST00000425804 FOXC1Q12948 553 aa8.59□□□□□ -1.03
R3HDM1-205ENST00000425804 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
R3HDM1-205ENST00000425804 AXIN1O15169 862 aa8.57□□□□□ -1.04
R3HDM1-205ENST00000425804 AVPP01185 164 aa8.57□□□□□ -1.04
R3HDM1-205ENST00000425804 SPDYE16A6NNV3 312 aaPredicted RBP8.56□□□□□ -1.04
R3HDM1-205ENST00000425804 LMOD2Q6P5Q4 547 aa8.56□□□□□ -1.04
R3HDM1-205ENST00000425804 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
R3HDM1-205ENST00000425804 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
R3HDM1-205ENST00000425804 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
R3HDM1-205ENST00000425804 ADH1BP00325 375 aa8.53□□□□□ -1.04
R3HDM1-205ENST00000425804 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
R3HDM1-205ENST00000425804 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
R3HDM1-205ENST00000425804 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
R3HDM1-205ENST00000425804 EYA1Q99502 592 aa8.52□□□□□ -1.05
R3HDM1-205ENST00000425804 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-205ENST00000425804 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
R3HDM1-205ENST00000425804 OSBPP22059 807 aa8.5□□□□□ -1.05
R3HDM1-205ENST00000425804 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
R3HDM1-205ENST00000425804 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-205ENST00000425804 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-205ENST00000425804 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
R3HDM1-205ENST00000425804 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-205ENST00000425804 KMT5BQ4FZB7 885 aa8.47□□□□□ -1.05
R3HDM1-205ENST00000425804 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
R3HDM1-205ENST00000425804 NR1I2O75469 434 aa8.45□□□□□ -1.06
R3HDM1-205ENST00000425804 CFHP08603 1231 aa8.45□□□□□ -1.06
R3HDM1-205ENST00000425804 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
R3HDM1-205ENST00000425804 RPIAP49247 311 aa8.44□□□□□ -1.06
R3HDM1-205ENST00000425804 TRIM47Q96LD4 638 aa8.43□□□□□ -1.06
R3HDM1-205ENST00000425804 DNAJB2P25686 324 aa8.42□□□□□ -1.06
R3HDM1-205ENST00000425804 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
R3HDM1-205ENST00000425804 TMEM134Q9H6X4 195 aa8.41□□□□□ -1.06
R3HDM1-205ENST00000425804 TTC24A2A3L6 582 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-205ENST00000425804 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
R3HDM1-205ENST00000425804 ZSCAN1Q8NBB4 408 aa8.4□□□□□ -1.06
R3HDM1-205ENST00000425804 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
R3HDM1-205ENST00000425804 SCUBE3Q8IX30 993 aa8.39□□□□□ -1.07
R3HDM1-205ENST00000425804 SPSB2Q99619 263 aa8.38□□□□□ -1.07
R3HDM1-205ENST00000425804 ARIH1Q9Y4X5 557 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-205ENST00000425804 GMPRP36959 345 aa8.37□□□□□ -1.07
R3HDM1-205ENST00000425804 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
R3HDM1-205ENST00000425804 SLC10A3P09131 477 aa8.36□□□□□ -1.07
R3HDM1-205ENST00000425804 SMPD1P17405 629 aa8.36□□□□□ -1.07
R3HDM1-205ENST00000425804 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
R3HDM1-205ENST00000425804 E2F4Q16254 413 aa8.35□□□□□ -1.07
R3HDM1-205ENST00000425804 PUS10Q3MIT2 529 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-205ENST00000425804 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-205ENST00000425804 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
R3HDM1-205ENST00000425804 RCCD1A6NED2 376 aa8.32□□□□□ -1.08
R3HDM1-205ENST00000425804 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-205ENST00000425804 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-205ENST00000425804 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
R3HDM1-205ENST00000425804 J3QL48 77 aa8.29□□□□□ -1.08
R3HDM1-205ENST00000425804 WNT7AO00755 349 aa8.29□□□□□ -1.08
R3HDM1-205ENST00000425804 DCAF8L2P0C7V8 631 aa8.29□□□□□ -1.08
R3HDM1-205ENST00000425804 IRF7Q92985 503 aa8.29□□□□□ -1.08
R3HDM1-205ENST00000425804 HPS1Q92902 700 aa8.28□□□□□ -1.08
R3HDM1-205ENST00000425804 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-205ENST00000425804 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
R3HDM1-205ENST00000425804 VEGFBP49765 207 aa8.26□□□□□ -1.09
R3HDM1-205ENST00000425804 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
R3HDM1-205ENST00000425804 MRGPRX2Q96LB1 330 aa8.26□□□□□ -1.09
R3HDM1-205ENST00000425804 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
R3HDM1-205ENST00000425804 THAP11Q96EK4 314 aa8.25□□□□□ -1.09
R3HDM1-205ENST00000425804 PRDM9Q9NQV7 894 aa8.25□□□□□ -1.09
R3HDM1-205ENST00000425804 PTGDRQ13258 359 aa8.24□□□□□ -1.09
R3HDM1-205ENST00000425804 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
R3HDM1-205ENST00000425804 H3BM21 787 aa8.23□□□□□ -1.09
R3HDM1-205ENST00000425804 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
R3HDM1-205ENST00000425804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-205ENST00000425804 TRIM32Q13049 653 aa8.22□□□□□ -1.09
R3HDM1-205ENST00000425804 MORN1Q5T089 497 aa8.22□□□□□ -1.09
R3HDM1-205ENST00000425804 FMNL1O95466 1100 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-205ENST00000425804 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
R3HDM1-205ENST00000425804 GSK3AP49840 483 aa8.18□□□□□ -1.1
R3HDM1-205ENST00000425804 KCNMA1Q12791 1236 aa8.18□□□□□ -1.1
R3HDM1-205ENST00000425804 WDR70Q9NW82 654 aa8.18□□□□□ -1.1
R3HDM1-205ENST00000425804 BMP1P13497 986 aa8.17□□□□□ -1.1
R3HDM1-205ENST00000425804 FUT2Q10981 343 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms