RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
SDCBP-203ENST00000424270 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
SDCBP-203ENST00000424270 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-203ENST00000424270 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
SDCBP-203ENST00000424270 FYCO1Q9BQS8 1478 aa10.27□□□□□ -0.77
SDCBP-203ENST00000424270 MBD5Q9P267 1494 aa10.27□□□□□ -0.77
SDCBP-203ENST00000424270 YY1P25490 414 aa10.26□□□□□ -0.77
SDCBP-203ENST00000424270 USP21Q9UK80 565 aa10.26□□□□□ -0.77
SDCBP-203ENST00000424270 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-203ENST00000424270 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
SDCBP-203ENST00000424270 RSPH4AQ5TD94 716 aa10.25□□□□□ -0.77
SDCBP-203ENST00000424270 LRRC59Q96AG4 307 aaKnown RBP10.25□□□□□ -0.77
SDCBP-203ENST00000424270 TRPC5Q9UL62 973 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-203ENST00000424270 EFCAB6Q5THR3 1501 aa10.24□□□□□ -0.77
SDCBP-203ENST00000424270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDCBP-203ENST00000424270 C19orf44Q9H6X5 657 aa10.24□□□□□ -0.77
SDCBP-203ENST00000424270 CFAP65Q6ZU64 1925 aaKnown RBP10.24□□□□□ -0.77
SDCBP-203ENST00000424270 NWD1Q149M9 1564 aa10.23□□□□□ -0.77
SDCBP-203ENST00000424270 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
SDCBP-203ENST00000424270 BRINP3Q76B58 766 aa10.23□□□□□ -0.77
SDCBP-203ENST00000424270 CEP152O94986 1710 aa10.22□□□□□ -0.77
SDCBP-203ENST00000424270 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-203ENST00000424270 IFFO2Q5TF58 517 aa10.21□□□□□ -0.77
SDCBP-203ENST00000424270 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.78
SDCBP-203ENST00000424270 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
SDCBP-203ENST00000424270 LRP5O75197 1615 aa10.2□□□□□ -0.78
SDCBP-203ENST00000424270 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
SDCBP-203ENST00000424270 DEFB132Q7Z7B7 95 aa10.2□□□□□ -0.78
SDCBP-203ENST00000424270 TET3O43151 1660 aa10.19□□□□□ -0.78
SDCBP-203ENST00000424270 DIP2AQ14689 1571 aa10.19□□□□□ -0.78
SDCBP-203ENST00000424270 IDI1Q13907 227 aa10.19□□□□□ -0.78
SDCBP-203ENST00000424270 BLMP54132 1417 aaPredicted RBP10.18□□□□□ -0.78
SDCBP-203ENST00000424270 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
SDCBP-203ENST00000424270 NCOA3Q9Y6Q9 1424 aa10.18□□□□□ -0.78
SDCBP-203ENST00000424270 KANK1Q14678 1352 aa10.18□□□□□ -0.78
SDCBP-203ENST00000424270 ASXL1Q8IXJ9 1541 aa10.17□□□□□ -0.78
SDCBP-203ENST00000424270 PNPLA6Q8IY17 1366 aa10.17□□□□□ -0.78
SDCBP-203ENST00000424270 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-203ENST00000424270 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
SDCBP-203ENST00000424270 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
SDCBP-203ENST00000424270 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
SDCBP-203ENST00000424270 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
SDCBP-203ENST00000424270 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
SDCBP-203ENST00000424270 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
SDCBP-203ENST00000424270 ARHGAP31Q2M1Z3 1444 aa10.16□□□□□ -0.78
SDCBP-203ENST00000424270 HRCP23327 699 aa10.15□□□□□ -0.78
SDCBP-203ENST00000424270 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
SDCBP-203ENST00000424270 MROH1Q8NDA8 1641 aa10.14□□□□□ -0.79
SDCBP-203ENST00000424270 ADGRB3O60242 1522 aa10.13□□□□□ -0.79
SDCBP-203ENST00000424270 TBX22Q9Y458 520 aa10.13□□□□□ -0.79
SDCBP-203ENST00000424270 CHD2O14647 1828 aaKnown RBP10.12□□□□□ -0.79
SDCBP-203ENST00000424270 A0A0G2JS52 829 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 BAG6P46379 1132 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 MYT1Q01538 1121 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 CNKSR2Q8WXI2 1034 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-203ENST00000424270 AMOTL2Q9Y2J4 779 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 ATRNO75882 1429 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
SDCBP-203ENST00000424270 RIMS2Q9UQ26 1411 aa10.11□□□□□ -0.79
SDCBP-203ENST00000424270 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-203ENST00000424270 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.11□□□□□ -0.79
SDCBP-203ENST00000424270 SLC52A1Q9NWF4 448 aa10.11□□□□□ -0.79
SDCBP-203ENST00000424270 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
SDCBP-203ENST00000424270 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
SDCBP-203ENST00000424270 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
SDCBP-203ENST00000424270 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
SDCBP-203ENST00000424270 DUOX2Q9NRD8 1548 aa10.1□□□□□ -0.79
SDCBP-203ENST00000424270 DCCP43146 1447 aa10.09□□□□□ -0.79
SDCBP-203ENST00000424270 PTCH1Q13635 1447 aa10.09□□□□□ -0.79
SDCBP-203ENST00000424270 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-203ENST00000424270 MST1RQ04912 1400 aa10.08□□□□□ -0.8
SDCBP-203ENST00000424270 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
SDCBP-203ENST00000424270 PIK3R4Q99570 1358 aa10.06□□□□□ -0.8
SDCBP-203ENST00000424270 TRPM2O94759 1503 aa10.06□□□□□ -0.8
SDCBP-203ENST00000424270 ERBINQ96RT1 1412 aa10.06□□□□□ -0.8
SDCBP-203ENST00000424270 EP400Q96L91 3159 aa10.05□□□□□ -0.8
SDCBP-203ENST00000424270 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
SDCBP-203ENST00000424270 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
SDCBP-203ENST00000424270 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
SDCBP-203ENST00000424270 ZFYVE9O95405 1425 aa10.05□□□□□ -0.8
SDCBP-203ENST00000424270 UNC13BO14795 1591 aa10.05□□□□□ -0.8
SDCBP-203ENST00000424270 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
SDCBP-203ENST00000424270 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
SDCBP-203ENST00000424270 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-203ENST00000424270 UNC5CLQ8IV45 518 aa10.03□□□□□ -0.8
SDCBP-203ENST00000424270 RALGAPBQ86X10 1494 aa10.03□□□□□ -0.8
SDCBP-203ENST00000424270 NOS1P29475 1434 aa10.02□□□□□ -0.81
SDCBP-203ENST00000424270 ADAMTS13Q76LX8 1427 aa10.02□□□□□ -0.81
SDCBP-203ENST00000424270 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
SDCBP-203ENST00000424270 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
SDCBP-203ENST00000424270 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
SDCBP-203ENST00000424270 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.81
SDCBP-203ENST00000424270 ORAI2Q96SN7 254 aa10.01□□□□□ -0.81
SDCBP-203ENST00000424270 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
SDCBP-203ENST00000424270 PTPRUQ92729 1446 aa10□□□□□ -0.81
SDCBP-203ENST00000424270 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
SDCBP-203ENST00000424270 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
SDCBP-203ENST00000424270 ADGRL3Q9HAR2 1447 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms