RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
POLR1A-204ENST00000424089 STAG3Q9UJ98 1225 aa14.28□□□□□ -0.12
POLR1A-204ENST00000424089 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.12
POLR1A-204ENST00000424089 LTKP29376 864 aa14.27□□□□□ -0.13
POLR1A-204ENST00000424089 ARHGAP31Q2M1Z3 1444 aa14.26□□□□□ -0.13
POLR1A-204ENST00000424089 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
POLR1A-204ENST00000424089 ANKRD50Q9ULJ7 1429 aa14.25□□□□□ -0.13
POLR1A-204ENST00000424089 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
POLR1A-204ENST00000424089 KDM5AP29375 1690 aaKnown RBP14.25□□□□□ -0.13
POLR1A-204ENST00000424089 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
POLR1A-204ENST00000424089 PRDM15P57071 1507 aaPredicted RBP14.25□□□□□ -0.13
POLR1A-204ENST00000424089 SETD1AO15047 1707 aaKnown RBP14.24□□□□□ -0.13
POLR1A-204ENST00000424089 ANKRD30BQ9BXX2 1392 aa14.24□□□□□ -0.13
POLR1A-204ENST00000424089 KANK1Q14678 1352 aa14.23□□□□□ -0.13
POLR1A-204ENST00000424089 TMEM2Q9UHN6 1383 aa14.23□□□□□ -0.13
POLR1A-204ENST00000424089 CENPBP07199 599 aaPredicted RBP14.23□□□□□ -0.13
POLR1A-204ENST00000424089 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
POLR1A-204ENST00000424089 ERBINQ96RT1 1412 aa14.23□□□□□ -0.13
POLR1A-204ENST00000424089 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
POLR1A-204ENST00000424089 EFCAB6Q5THR3 1501 aa14.22□□□□□ -0.13
POLR1A-204ENST00000424089 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
POLR1A-204ENST00000424089 KCNA6P17658 529 aa14.21□□□□□ -0.13
POLR1A-204ENST00000424089 PROSER2Q86WR7 435 aaPredicted RBP14.21□□□□□ -0.13
POLR1A-204ENST00000424089 MIER1Q8N108 512 aa14.21□□□□□ -0.13
POLR1A-204ENST00000424089 RPRD2Q5VT52 1461 aaKnown RBP14.2□□□□□ -0.14
POLR1A-204ENST00000424089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.142e-7■■■□□ 18.7
POLR1A-204ENST00000424089 PHLPP1O60346 1717 aa14.2□□□□□ -0.14
POLR1A-204ENST00000424089 MSH6P52701 1360 aa14.19□□□□□ -0.14
POLR1A-204ENST00000424089 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
POLR1A-204ENST00000424089 MEX3CQ5U5Q3 659 aaKnown RBP14.18□□□□□ -0.14
POLR1A-204ENST00000424089 BCANQ96GW7 911 aa14.18□□□□□ -0.14
POLR1A-204ENST00000424089 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
POLR1A-204ENST00000424089 NWD1Q149M9 1564 aa14.17□□□□□ -0.14
POLR1A-204ENST00000424089 JCADQ9P266 1359 aa14.16□□□□□ -0.14
POLR1A-204ENST00000424089 TET3O43151 1660 aa14.16□□□□□ -0.14
POLR1A-204ENST00000424089 NUP155O75694 1391 aa14.15□□□□□ -0.14
POLR1A-204ENST00000424089 IDI1Q13907 227 aa14.15□□□□□ -0.14
POLR1A-204ENST00000424089 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
POLR1A-204ENST00000424089 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
POLR1A-204ENST00000424089 ADGRB3O60242 1522 aa14.15□□□□□ -0.14
POLR1A-204ENST00000424089 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
POLR1A-204ENST00000424089 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
POLR1A-204ENST00000424089 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
POLR1A-204ENST00000424089 RXRBP28702 533 aa14.12□□□□□ -0.15
POLR1A-204ENST00000424089 SLC52A1Q9NWF4 448 aa14.12□□□□□ -0.15
POLR1A-204ENST00000424089 CHD2O14647 1828 aaKnown RBP14.11□□□□□ -0.15
POLR1A-204ENST00000424089 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
POLR1A-204ENST00000424089 FOXD1Q16676 465 aa14.1□□□□□ -0.15
POLR1A-204ENST00000424089 SPATA31A6Q5VVP1 1343 aa14.1□□□□□ -0.15
POLR1A-204ENST00000424089 NOS1P29475 1434 aa14.09□□□□□ -0.15
POLR1A-204ENST00000424089 COL16A1Q07092 1604 aaPredicted RBP14.09□□□□□ -0.15
POLR1A-204ENST00000424089 EIF4G2P78344 907 aaKnown RBP eCLIP14.09□□□□□ -0.15
POLR1A-204ENST00000424089 C14orf37Q86TY3 774 aa14.09□□□□□ -0.15
POLR1A-204ENST00000424089 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.15
POLR1A-204ENST00000424089 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
POLR1A-204ENST00000424089 NCOA3Q9Y6Q9 1424 aa14.07□□□□□ -0.16
POLR1A-204ENST00000424089 SHPRHQ149N8 1683 aa14.06□□□□□ -0.16
POLR1A-204ENST00000424089 CADPS2Q86UW7 1296 aa14.05□□□□□ -0.16
POLR1A-204ENST00000424089 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
POLR1A-204ENST00000424089 UNC13BO14795 1591 aa14.05□□□□□ -0.16
POLR1A-204ENST00000424089 SRCAPQ6ZRS2 3230 aa14.04□□□□□ -0.16
POLR1A-204ENST00000424089 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
POLR1A-204ENST00000424089 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
POLR1A-204ENST00000424089 ATF3P18847 181 aa14.04□□□□□ -0.16
POLR1A-204ENST00000424089 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
POLR1A-204ENST00000424089 NUTM2AQ8IVF1 878 aaPredicted RBP14.04□□□□□ -0.16
POLR1A-204ENST00000424089 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
POLR1A-204ENST00000424089 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
POLR1A-204ENST00000424089 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR1A-204ENST00000424089 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
POLR1A-204ENST00000424089 LRP6O75581 1613 aa14.03□□□□□ -0.16
POLR1A-204ENST00000424089 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.03□□□□□ -0.16
POLR1A-204ENST00000424089 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
POLR1A-204ENST00000424089 HSPA5P11021 654 aaKnown RBP14.02□□□□□ -0.17
POLR1A-204ENST00000424089 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
POLR1A-204ENST00000424089 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
POLR1A-204ENST00000424089 C19orf44Q9H6X5 657 aa14.01□□□□□ -0.17
POLR1A-204ENST00000424089 CCER2I3L3R5 266 aa14□□□□□ -0.17
POLR1A-204ENST00000424089 ANP32CO43423 234 aa14□□□□□ -0.17
POLR1A-204ENST00000424089 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
POLR1A-204ENST00000424089 NBPF8Q3BBV2 869 aa14□□□□□ -0.17
POLR1A-204ENST00000424089 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
POLR1A-204ENST00000424089 IQGAP3Q86VI3 1631 aa13.99□□□□□ -0.17
POLR1A-204ENST00000424089 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
POLR1A-204ENST00000424089 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
POLR1A-204ENST00000424089 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
POLR1A-204ENST00000424089 AFF2P51816 1311 aa13.97□□□□□ -0.17
POLR1A-204ENST00000424089 TRPM2O94759 1503 aa13.97□□□□□ -0.17
POLR1A-204ENST00000424089 HIRIP3Q9BW71 556 aaPredicted RBP13.97□□□□□ -0.17
POLR1A-204ENST00000424089 CCDC144AA2RUR9 1427 aa13.97□□□□□ -0.17
POLR1A-204ENST00000424089 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
POLR1A-204ENST00000424089 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
POLR1A-204ENST00000424089 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
POLR1A-204ENST00000424089 DCCP43146 1447 aa13.95□□□□□ -0.18
POLR1A-204ENST00000424089 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
POLR1A-204ENST00000424089 BRINP3Q76B58 766 aa13.94□□□□□ -0.18
POLR1A-204ENST00000424089 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
POLR1A-204ENST00000424089 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
POLR1A-204ENST00000424089 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
POLR1A-204ENST00000424089 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms