RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 RGS3P49796 1198 aa15.47■□□□□ 0.07
ERCC1-204ENST00000423698 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
ERCC1-204ENST00000423698 STK26Q9P289 416 aa15.46■□□□□ 0.06
ERCC1-204ENST00000423698 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
ERCC1-204ENST00000423698 UGGT1Q9NYU2 1555 aa15.45■□□□□ 0.06
ERCC1-204ENST00000423698 POLR1AO95602 1720 aaPredicted RBP15.44■□□□□ 0.06
ERCC1-204ENST00000423698 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 BCAR3O75815 825 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 BCL2L13Q9BXK5 485 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 SLC12A5Q9H2X9 1139 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 RAPGEF3O95398 923 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
ERCC1-204ENST00000423698 PLEKHH1Q9ULM0 1364 aa15.42■□□□□ 0.06
ERCC1-204ENST00000423698 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
ERCC1-204ENST00000423698 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
ERCC1-204ENST00000423698 PDE4AP27815 886 aa15.42■□□□□ 0.06
ERCC1-204ENST00000423698 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
ERCC1-204ENST00000423698 CYB5RLQ6IPT4 315 aa15.41■□□□□ 0.06
ERCC1-204ENST00000423698 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
ERCC1-204ENST00000423698 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
ERCC1-204ENST00000423698 COL17A1Q9UMD9 1497 aaPredicted RBP15.41■□□□□ 0.06
ERCC1-204ENST00000423698 DUOX2Q9NRD8 1548 aa15.39■□□□□ 0.05
ERCC1-204ENST00000423698 ABCC1P33527 1531 aa15.39■□□□□ 0.05
ERCC1-204ENST00000423698 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
ERCC1-204ENST00000423698 WDR7Q9Y4E6 1490 aa15.38■□□□□ 0.05
ERCC1-204ENST00000423698 CANXP27824 592 aaKnown RBP15.37■□□□□ 0.05
ERCC1-204ENST00000423698 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
ERCC1-204ENST00000423698 FANCAO15360 1455 aa15.37■□□□□ 0.05
ERCC1-204ENST00000423698 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
ERCC1-204ENST00000423698 ASXL2Q76L83 1435 aa15.37■□□□□ 0.05
ERCC1-204ENST00000423698 KANK1Q14678 1352 aa15.36■□□□□ 0.05
ERCC1-204ENST00000423698 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
ERCC1-204ENST00000423698 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
ERCC1-204ENST00000423698 GPRASP1Q5JY77 1395 aa15.35■□□□□ 0.05
ERCC1-204ENST00000423698 UNC13BO14795 1591 aa15.35■□□□□ 0.05
ERCC1-204ENST00000423698 PLXNC1O60486 1568 aa15.35■□□□□ 0.05
ERCC1-204ENST00000423698 ARXQ96QS3 562 aa15.35■□□□□ 0.05
ERCC1-204ENST00000423698 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
ERCC1-204ENST00000423698 MORC1Q86VD1 984 aa15.34■□□□□ 0.05
ERCC1-204ENST00000423698 ATP10AO60312 1499 aa15.34■□□□□ 0.05
ERCC1-204ENST00000423698 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
ERCC1-204ENST00000423698 PDE3BQ13370 1112 aa15.34■□□□□ 0.05
ERCC1-204ENST00000423698 PANK1Q8TE04 598 aa15.33■□□□□ 0.05
ERCC1-204ENST00000423698 CABP2Q9NPB3 220 aa15.33■□□□□ 0.05
ERCC1-204ENST00000423698 TNNQ9UQP3 1299 aa15.33■□□□□ 0.05
ERCC1-204ENST00000423698 FBLN1P23142 703 aa15.32■□□□□ 0.04
ERCC1-204ENST00000423698 GSE1Q14687 1217 aa15.32■□□□□ 0.04
ERCC1-204ENST00000423698 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
ERCC1-204ENST00000423698 IQGAP3Q86VI3 1631 aa15.31■□□□□ 0.04
ERCC1-204ENST00000423698 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
ERCC1-204ENST00000423698 PPM1GO15355 546 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-204ENST00000423698 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
ERCC1-204ENST00000423698 PRDM15P57071 1507 aaPredicted RBP15.31■□□□□ 0.04
ERCC1-204ENST00000423698 MLECQ14165 292 aa15.3■□□□□ 0.04
ERCC1-204ENST00000423698 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
ERCC1-204ENST00000423698 BACH2Q9BYV9 841 aa15.29■□□□□ 0.04
ERCC1-204ENST00000423698 NOS1P29475 1434 aa15.29■□□□□ 0.04
ERCC1-204ENST00000423698 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
ERCC1-204ENST00000423698 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
ERCC1-204ENST00000423698 NFKBIBQ15653 356 aa15.28■□□□□ 0.04
ERCC1-204ENST00000423698 E9PCH4 1651 aa15.28■□□□□ 0.04
ERCC1-204ENST00000423698 MTHFSP49914 203 aa15.28■□□□□ 0.04
ERCC1-204ENST00000423698 CENPJQ9HC77 1338 aaPredicted RBP15.27■□□□□ 0.04
ERCC1-204ENST00000423698 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.04
ERCC1-204ENST00000423698 ATP7AQ04656 1500 aa15.27■□□□□ 0.03
ERCC1-204ENST00000423698 SLFN5Q08AF3 891 aa15.27■□□□□ 0.03
ERCC1-204ENST00000423698 SRPK2P78362 688 aaKnown RBP15.26■□□□□ 0.03
ERCC1-204ENST00000423698 MINK1Q8N4C8 1332 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-204ENST00000423698 CLTCL1P53675 1640 aa15.26■□□□□ 0.03
ERCC1-204ENST00000423698 GGNBP2Q9H3C7 697 aa15.26■□□□□ 0.03
ERCC1-204ENST00000423698 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
ERCC1-204ENST00000423698 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
ERCC1-204ENST00000423698 IGHDP01880 384 aa15.23■□□□□ 0.03
ERCC1-204ENST00000423698 RTEL1-TNFRSF6BF6WH68 1400 aa15.23■□□□□ 0.03
ERCC1-204ENST00000423698 BLMP54132 1417 aaPredicted RBP15.23■□□□□ 0.03
ERCC1-204ENST00000423698 CD109Q6YHK3 1445 aa15.23■□□□□ 0.03
ERCC1-204ENST00000423698 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
ERCC1-204ENST00000423698 TCP11L2Q8N4U5 519 aa15.23■□□□□ 0.03
ERCC1-204ENST00000423698 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
ERCC1-204ENST00000423698 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
ERCC1-204ENST00000423698 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
ERCC1-204ENST00000423698 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
ERCC1-204ENST00000423698 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
ERCC1-204ENST00000423698 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
ERCC1-204ENST00000423698 FRAT2O75474 233 aaPredicted RBP15.21■□□□□ 0.02
ERCC1-204ENST00000423698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.02
ERCC1-204ENST00000423698 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
ERCC1-204ENST00000423698 MADDQ8WXG6 1647 aa15.2■□□□□ 0.02
ERCC1-204ENST00000423698 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
ERCC1-204ENST00000423698 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
ERCC1-204ENST00000423698 IDI1Q13907 227 aa15.19■□□□□ 0.02
ERCC1-204ENST00000423698 ASXL1Q8IXJ9 1541 aa15.19■□□□□ 0.02
ERCC1-204ENST00000423698 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
ERCC1-204ENST00000423698 ERVK-7P63135 1459 aa15.18■□□□□ 0.02
ERCC1-204ENST00000423698 POGKQ9P215 609 aa15.18■□□□□ 0.02
ERCC1-204ENST00000423698 EIF2AK4Q9P2K8 1649 aaKnown RBP15.18■□□□□ 0.02
ERCC1-204ENST00000423698 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
ERCC1-204ENST00000423698 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
ERCC1-204ENST00000423698 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms