RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
TNC-203ENST00000423613 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
TNC-203ENST00000423613 TPM1P09493 284 aa13.59□□□□□ -0.23
TNC-203ENST00000423613 LEKR1Q6ZMV7 388 aa13.59□□□□□ -0.23
TNC-203ENST00000423613 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
TNC-203ENST00000423613 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
TNC-203ENST00000423613 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
TNC-203ENST00000423613 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
TNC-203ENST00000423613 ZNF526Q8TF50 670 aaPredicted RBP13.58□□□□□ -0.24
TNC-203ENST00000423613 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
TNC-203ENST00000423613 KIF3BO15066 747 aa13.58□□□□□ -0.24
TNC-203ENST00000423613 CDR1P51861 262 aa13.58□□□□□ -0.24
TNC-203ENST00000423613 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
TNC-203ENST00000423613 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
TNC-203ENST00000423613 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
TNC-203ENST00000423613 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
TNC-203ENST00000423613 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
TNC-203ENST00000423613 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
TNC-203ENST00000423613 ST18O60284 1047 aa13.56□□□□□ -0.24
TNC-203ENST00000423613 PCMTD1Q96MG8 357 aaPredicted RBP13.56□□□□□ -0.24
TNC-203ENST00000423613 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
TNC-203ENST00000423613 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 C1orf141Q5JVX7 400 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 NEFHP12036 1026 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
TNC-203ENST00000423613 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
TNC-203ENST00000423613 H3BQV1 296 aa13.54□□□□□ -0.24
TNC-203ENST00000423613 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
TNC-203ENST00000423613 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
TNC-203ENST00000423613 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
TNC-203ENST00000423613 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
TNC-203ENST00000423613 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
TNC-203ENST00000423613 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
TNC-203ENST00000423613 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
TNC-203ENST00000423613 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
TNC-203ENST00000423613 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
TNC-203ENST00000423613 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.24
TNC-203ENST00000423613 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.24
TNC-203ENST00000423613 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
TNC-203ENST00000423613 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
TNC-203ENST00000423613 PDE4AP27815 886 aa13.52□□□□□ -0.25
TNC-203ENST00000423613 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
TNC-203ENST00000423613 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.25
TNC-203ENST00000423613 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
TNC-203ENST00000423613 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
TNC-203ENST00000423613 AKAP17AQ02040 695 aaKnown RBP13.51□□□□□ -0.25
TNC-203ENST00000423613 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
TNC-203ENST00000423613 PLIN1O60240 522 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 NAP1L1P55209 391 aaKnown RBP13.5□□□□□ -0.25
TNC-203ENST00000423613 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 GIMAP7Q8NHV1 300 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 PANK3Q9H999 370 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 FANCIQ9NVI1 1328 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
TNC-203ENST00000423613 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
TNC-203ENST00000423613 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
TNC-203ENST00000423613 TNNT1P13805 278 aa13.49□□□□□ -0.25
TNC-203ENST00000423613 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
TNC-203ENST00000423613 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
TNC-203ENST00000423613 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
TNC-203ENST00000423613 CENPHQ9H3R5 247 aa13.48□□□□□ -0.25
TNC-203ENST00000423613 ELL2O00472 640 aaPredicted RBP13.48□□□□□ -0.25
TNC-203ENST00000423613 KIAA0754O94854 1291 aa13.48□□□□□ -0.25
TNC-203ENST00000423613 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
TNC-203ENST00000423613 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
TNC-203ENST00000423613 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 TTLL5Q6EMB2 1281 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
TNC-203ENST00000423613 MCTP1Q6DN14 999 aa13.46□□□□□ -0.25
TNC-203ENST00000423613 FAM184AQ8NB25 1140 aa13.46□□□□□ -0.25
TNC-203ENST00000423613 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
TNC-203ENST00000423613 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
TNC-203ENST00000423613 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.26
TNC-203ENST00000423613 RRP9O43818 475 aaKnown RBP13.46□□□□□ -0.26
TNC-203ENST00000423613 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.26
TNC-203ENST00000423613 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
TNC-203ENST00000423613 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.26
TNC-203ENST00000423613 CCDC43Q96MW1 224 aaKnown RBP13.46□□□□□ -0.26
TNC-203ENST00000423613 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
TNC-203ENST00000423613 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
TNC-203ENST00000423613 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
TNC-203ENST00000423613 UQCRHLA0A096LP55 91 aa13.45□□□□□ -0.26
TNC-203ENST00000423613 UQCRHP07919 91 aa13.45□□□□□ -0.26
TNC-203ENST00000423613 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
TNC-203ENST00000423613 SF3B2Q13435 895 aaKnown RBP13.44□□□□□ -0.26
TNC-203ENST00000423613 E9PSI1 815 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
TNC-203ENST00000423613 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
TNC-203ENST00000423613 PRKRIP1Q9H875 184 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms