RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
LINC00458-201ENST00000423442 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
LINC00458-201ENST00000423442 ZPR1O75312 459 aa11.68□□□□□ -0.54
LINC00458-201ENST00000423442 DNAJB2P25686 324 aa11.68□□□□□ -0.54
LINC00458-201ENST00000423442 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
LINC00458-201ENST00000423442 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
LINC00458-201ENST00000423442 SEMA3EO15041 775 aa11.66□□□□□ -0.54
LINC00458-201ENST00000423442 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
LINC00458-201ENST00000423442 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
LINC00458-201ENST00000423442 BLOC1S3Q6QNY0 202 aa11.65□□□□□ -0.54
LINC00458-201ENST00000423442 RCCD1A6NED2 376 aa11.64□□□□□ -0.55
LINC00458-201ENST00000423442 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
LINC00458-201ENST00000423442 GGCXP38435 758 aa11.63□□□□□ -0.55
LINC00458-201ENST00000423442 P3H3Q8IVL6 736 aa11.62□□□□□ -0.55
LINC00458-201ENST00000423442 TLL1O43897 1013 aa11.61□□□□□ -0.55
LINC00458-201ENST00000423442 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
LINC00458-201ENST00000423442 FCHSD2O94868 740 aa11.6□□□□□ -0.55
LINC00458-201ENST00000423442 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
LINC00458-201ENST00000423442 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
LINC00458-201ENST00000423442 CFHP08603 1231 aa11.58□□□□□ -0.56
LINC00458-201ENST00000423442 SLC10A3P09131 477 aa11.58□□□□□ -0.56
LINC00458-201ENST00000423442 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
LINC00458-201ENST00000423442 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
LINC00458-201ENST00000423442 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
LINC00458-201ENST00000423442 EMID1Q96A84 441 aaPredicted RBP11.56□□□□□ -0.56
LINC00458-201ENST00000423442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
LINC00458-201ENST00000423442 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-201ENST00000423442 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
LINC00458-201ENST00000423442 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
LINC00458-201ENST00000423442 S1PR4O95977 384 aa11.52□□□□□ -0.57
LINC00458-201ENST00000423442 SLC19A1P41440 591 aa11.52□□□□□ -0.57
LINC00458-201ENST00000423442 OATP04181 439 aa11.51□□□□□ -0.57
LINC00458-201ENST00000423442 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
LINC00458-201ENST00000423442 FECHP22830 423 aa11.5□□□□□ -0.57
LINC00458-201ENST00000423442 HIC1Q14526 733 aa11.5□□□□□ -0.57
LINC00458-201ENST00000423442 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
LINC00458-201ENST00000423442 TRIM67Q6ZTA4 783 aa11.5□□□□□ -0.57
LINC00458-201ENST00000423442 METTL3Q86U44 580 aaKnown RBP11.5□□□□□ -0.57
LINC00458-201ENST00000423442 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
LINC00458-201ENST00000423442 NR1I2O75469 434 aa11.47□□□□□ -0.57
LINC00458-201ENST00000423442 ADH1BP00325 375 aa11.47□□□□□ -0.57
LINC00458-201ENST00000423442 PUS10Q3MIT2 529 aaKnown RBP11.47□□□□□ -0.57
LINC00458-201ENST00000423442 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.57
LINC00458-201ENST00000423442 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
LINC00458-201ENST00000423442 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
LINC00458-201ENST00000423442 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
LINC00458-201ENST00000423442 SCUBE3Q8IX30 993 aa11.46□□□□□ -0.57
LINC00458-201ENST00000423442 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
LINC00458-201ENST00000423442 GNPATO15228 680 aa11.44□□□□□ -0.58
LINC00458-201ENST00000423442 GPR37O15354 613 aa11.44□□□□□ -0.58
LINC00458-201ENST00000423442 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
LINC00458-201ENST00000423442 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
LINC00458-201ENST00000423442 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
LINC00458-201ENST00000423442 ZNF598Q86UK7 904 aaKnown RBP11.43□□□□□ -0.58
LINC00458-201ENST00000423442 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
LINC00458-201ENST00000423442 PLA2G2CQ5R387 149 aa11.42□□□□□ -0.58
LINC00458-201ENST00000423442 RSPH4AQ5TD94 716 aa11.4□□□□□ -0.58
LINC00458-201ENST00000423442 ZNF697Q5TEC3 545 aa11.4□□□□□ -0.58
LINC00458-201ENST00000423442 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
LINC00458-201ENST00000423442 ZNF775Q96BV0 537 aaPredicted RBP11.39□□□□□ -0.59
LINC00458-201ENST00000423442 SPSB2Q99619 263 aa11.39□□□□□ -0.59
LINC00458-201ENST00000423442 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
LINC00458-201ENST00000423442 DDX11L8A8MPP1 907 aa11.38□□□□□ -0.59
LINC00458-201ENST00000423442 PHOX2BQ99453 314 aa11.38□□□□□ -0.59
LINC00458-201ENST00000423442 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 PRR20EP86478 221 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 PRR20CP86479 221 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 PRR20DP86480 221 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 PRR20BP86481 221 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 PRR20AP86496 221 aa11.37□□□□□ -0.59
LINC00458-201ENST00000423442 DGAT1O75907 488 aa11.36□□□□□ -0.59
LINC00458-201ENST00000423442 FUT2Q10981 343 aa11.36□□□□□ -0.59
LINC00458-201ENST00000423442 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
LINC00458-201ENST00000423442 GDF9O60383 454 aa11.35□□□□□ -0.59
LINC00458-201ENST00000423442 MYT1Q01538 1121 aa11.35□□□□□ -0.59
LINC00458-201ENST00000423442 MORN1Q5T089 497 aa11.35□□□□□ -0.59
LINC00458-201ENST00000423442 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
LINC00458-201ENST00000423442 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.6
LINC00458-201ENST00000423442 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
LINC00458-201ENST00000423442 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
LINC00458-201ENST00000423442 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
LINC00458-201ENST00000423442 GCGRP47871 477 aa11.31□□□□□ -0.6
LINC00458-201ENST00000423442 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
LINC00458-201ENST00000423442 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
LINC00458-201ENST00000423442 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
LINC00458-201ENST00000423442 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
LINC00458-201ENST00000423442 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
LINC00458-201ENST00000423442 POTECB2RU33 542 aa11.28□□□□□ -0.6
LINC00458-201ENST00000423442 FOXC1Q12948 553 aa11.28□□□□□ -0.6
LINC00458-201ENST00000423442 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
LINC00458-201ENST00000423442 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
LINC00458-201ENST00000423442 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
LINC00458-201ENST00000423442 PRDM9Q9NQV7 894 aa11.27□□□□□ -0.61
LINC00458-201ENST00000423442 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
LINC00458-201ENST00000423442 SCRIBQ14160 1630 aa11.25□□□□□ -0.61
LINC00458-201ENST00000423442 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
LINC00458-201ENST00000423442 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
LINC00458-201ENST00000423442 ST8SIA5O15466 376 aa11.23□□□□□ -0.61
LINC00458-201ENST00000423442 RPIAP49247 311 aa11.23□□□□□ -0.61
LINC00458-201ENST00000423442 SALL2Q9Y467 1007 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms