RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 WDR63Q8IWG1 891 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 NAIPQ13075 1403 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 FAM135AQ9P2D6 1515 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 GNAI1P63096 354 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 RSPH6AQ9H0K4 717 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 UNC13AQ9UPW8 1703 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 KIF7Q2M1P5 1343 aa8.84□□□□□ -0.99
ALMS1-201ENST00000423048 OSCARQ8IYS5 282 aa8.84□□□□□ -1
ALMS1-201ENST00000423048 MAP7D2Q96T17 732 aa8.84□□□□□ -1
ALMS1-201ENST00000423048 NUCB2P80303 420 aa8.83□□□□□ -1
ALMS1-201ENST00000423048 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
ALMS1-201ENST00000423048 RPRD2Q5VT52 1461 aaKnown RBP8.83□□□□□ -1
ALMS1-201ENST00000423048 PNISRQ8TF01 805 aaKnown RBP8.83□□□□□ -1
ALMS1-201ENST00000423048 NCOA1Q15788 1441 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 HIP1O00291 1037 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 DUOX2Q9NRD8 1548 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 KIF3BO15066 747 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 CIZ1Q9ULV3 898 aaPredicted RBP8.82□□□□□ -1
ALMS1-201ENST00000423048 RTEL1-TNFRSF6BF6WH68 1400 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 ZMYM4Q5VZL5 1548 aa8.82□□□□□ -1
ALMS1-201ENST00000423048 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
ALMS1-201ENST00000423048 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
ALMS1-201ENST00000423048 GOLGA6L3A6NEY3 463 aa8.81□□□□□ -1
ALMS1-201ENST00000423048 OS9Q13438 667 aaPredicted RBP8.81□□□□□ -1
ALMS1-201ENST00000423048 PRG4Q92954 1404 aaPredicted RBP8.8□□□□□ -1
ALMS1-201ENST00000423048 RAPGEF6Q8TEU7 1601 aa8.8□□□□□ -1
ALMS1-201ENST00000423048 U2SURPO15042 1029 aaKnown RBP8.8□□□□□ -1
ALMS1-201ENST00000423048 CC2D1BQ5T0F9 858 aaKnown RBP8.8□□□□□ -1
ALMS1-201ENST00000423048 ZMYM3Q14202 1370 aa8.8□□□□□ -1
ALMS1-201ENST00000423048 ADGRL2O95490 1459 aa8.8□□□□□ -1
ALMS1-201ENST00000423048 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
ALMS1-201ENST00000423048 MFAP1P55081 439 aaKnown RBP8.8□□□□□ -1
ALMS1-201ENST00000423048 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -1
ALMS1-201ENST00000423048 RALGAPBQ86X10 1494 aa8.8□□□□□ -1
ALMS1-201ENST00000423048 GCC1Q96CN9 775 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 CHMP5Q9NZZ3 219 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 CAVIN1Q6NZI2 390 aaKnown RBP8.79□□□□□ -1
ALMS1-201ENST00000423048 KLHL34Q8N239 644 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 PLB1Q6P1J6 1458 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 COG3Q96JB2 828 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 NPC1L1Q9UHC9 1359 aa8.79□□□□□ -1
ALMS1-201ENST00000423048 KCNJ4P48050 445 aa8.78□□□□□ -1
ALMS1-201ENST00000423048 GOLGA6L1Q8N7Z2 621 aa8.78□□□□□ -1
ALMS1-201ENST00000423048 DDX58O95786 925 aaKnown RBP8.78□□□□□ -1
ALMS1-201ENST00000423048 WDR7Q9Y4E6 1490 aa8.78□□□□□ -1
ALMS1-201ENST00000423048 HOOK1Q9UJC3 728 aaKnown RBP8.78□□□□□ -1
ALMS1-201ENST00000423048 ADAMTS12P58397 1594 aa8.78□□□□□ -1
ALMS1-201ENST00000423048 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
ALMS1-201ENST00000423048 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
ALMS1-201ENST00000423048 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
ALMS1-201ENST00000423048 CFAP74Q9C0B2 1584 aa8.77□□□□□ -1.01
ALMS1-201ENST00000423048 IL16Q14005 1332 aa8.77□□□□□ -1.01
ALMS1-201ENST00000423048 CPLX2Q6PUV4 134 aaKnown RBP8.77□□□□□ -1.01
ALMS1-201ENST00000423048 FRAT1Q92837 279 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-201ENST00000423048 GPRASP1Q5JY77 1395 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
ALMS1-201ENST00000423048 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 A0A0U1RQG5 324 aaPredicted RBP8.76□□□□□ -1.01
ALMS1-201ENST00000423048 CCP110O43303 1012 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 HNRNPMP52272 730 aaKnown RBP eCLIP8.76□□□□□ -1.01
ALMS1-201ENST00000423048 FGD1P98174 961 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 ERC1Q8IUD2 1116 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 MBD3O95983 291 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
ALMS1-201ENST00000423048 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
ALMS1-201ENST00000423048 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
ALMS1-201ENST00000423048 PANK3Q9H999 370 aa8.75□□□□□ -1.01
ALMS1-201ENST00000423048 ERC2O15083 957 aa8.75□□□□□ -1.01
ALMS1-201ENST00000423048 SCAF11Q99590 1463 aaKnown RBP8.75□□□□□ -1.01
ALMS1-201ENST00000423048 GNAI3P08754 354 aa8.74□□□□□ -1.01
ALMS1-201ENST00000423048 ITPRIPQ8IWB1 547 aa8.74□□□□□ -1.01
ALMS1-201ENST00000423048 NBR1Q14596 966 aa8.74□□□□□ -1.01
ALMS1-201ENST00000423048 DZIP1LQ8IYY4 767 aaKnown RBP8.74□□□□□ -1.01
ALMS1-201ENST00000423048 ABCC5O15440 1437 aa8.74□□□□□ -1.01
ALMS1-201ENST00000423048 DNTTIP2Q5QJE6 756 aaKnown RBP8.74□□□□□ -1.01
ALMS1-201ENST00000423048 PKNOX2Q96KN3 472 aa8.74□□□□□ -1.01
ALMS1-201ENST00000423048 PDE4AP27815 886 aa8.73□□□□□ -1.01
ALMS1-201ENST00000423048 BCL11AQ9H165 835 aa8.73□□□□□ -1.01
ALMS1-201ENST00000423048 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
ALMS1-201ENST00000423048 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
ALMS1-201ENST00000423048 B4GALNT3Q6L9W6 998 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 PDCP20941 246 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 RGS3P49796 1198 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 GPS2Q13227 327 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 ALDH1L2Q3SY69 923 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 WDR62O43379 1518 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.72□□□□□ -1.01
ALMS1-201ENST00000423048 KIAA0556O60303 1618 aa8.72□□□□□ -1.01
ALMS1-201ENST00000423048 DNMT1P26358 1616 aaKnown RBP8.72□□□□□ -1.01
ALMS1-201ENST00000423048 DEKP35659 375 aaKnown RBP8.71□□□□□ -1.01
ALMS1-201ENST00000423048 CCDC47Q96A33 483 aaKnown RBP8.71□□□□□ -1.01
ALMS1-201ENST00000423048 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.01
ALMS1-201ENST00000423048 ZKSCAN1P17029 563 aaPredicted RBP8.71□□□□□ -1.01
ALMS1-201ENST00000423048 PSMA5P28066 241 aa8.71□□□□□ -1.01
ALMS1-201ENST00000423048 PIP4K2AP48426 406 aaPredicted RBP8.71□□□□□ -1.01
ALMS1-201ENST00000423048 NEXNQ0ZGT2 675 aa8.71□□□□□ -1.01
ALMS1-201ENST00000423048 RABEP1Q15276 862 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms