RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 CFAP65Q6ZU64 1925 aaKnown RBP26.17■■□□□ 1.78
RBFOX1-204ENST00000422070 ERVK-7P63135 1459 aa26.15■■□□□ 1.78
RBFOX1-204ENST00000422070 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
RBFOX1-204ENST00000422070 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.78
RBFOX1-204ENST00000422070 CLTCQ00610 1675 aaKnown RBP26.14■■□□□ 1.77
RBFOX1-204ENST00000422070 PIK3C2GO75747 1445 aa26.13■■□□□ 1.77
RBFOX1-204ENST00000422070 TESK2Q96S53 571 aa26.12■■□□□ 1.77
RBFOX1-204ENST00000422070 SPATA31D1Q6ZQQ2 1576 aa26.12■■□□□ 1.77
RBFOX1-204ENST00000422070 ADGRF5Q8IZF2 1346 aa26.11■■□□□ 1.77
RBFOX1-204ENST00000422070 NEXMIFQ5QGS0 1516 aa26.11■■□□□ 1.77
RBFOX1-204ENST00000422070 EIF3AQ14152 1382 aaKnown RBP26.09■■□□□ 1.77
RBFOX1-204ENST00000422070 TMEM131LA2VDJ0 1609 aa26.09■■□□□ 1.77
RBFOX1-204ENST00000422070 ZFYVE9O95405 1425 aa26.09■■□□□ 1.77
RBFOX1-204ENST00000422070 IDI1Q13907 227 aa26.06■■□□□ 1.76
RBFOX1-204ENST00000422070 CHGAP10645 457 aaKnown RBP26.06■■□□□ 1.76
RBFOX1-204ENST00000422070 PRKRIP1Q9H875 184 aaPredicted RBP26.05■■□□□ 1.76
RBFOX1-204ENST00000422070 MYO3AQ8NEV4 1616 aa26.05■■□□□ 1.76
RBFOX1-204ENST00000422070 TMF1P82094 1093 aa26.03■■□□□ 1.76
RBFOX1-204ENST00000422070 SLC24A1O60721 1099 aa26.02■■□□□ 1.76
RBFOX1-204ENST00000422070 CFAP70Q5T0N1 1121 aa26.02■■□□□ 1.76
RBFOX1-204ENST00000422070 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
RBFOX1-204ENST00000422070 VGFO15240 615 aaPredicted RBP26.01■■□□□ 1.75
RBFOX1-204ENST00000422070 DISP3Q9P2K9 1392 aa26.01■■□□□ 1.75
RBFOX1-204ENST00000422070 C14orf93Q9H972 538 aaKnown RBP26■■□□□ 1.75
RBFOX1-204ENST00000422070 SBNO2Q9Y2G9 1366 aa25.98■■□□□ 1.75
RBFOX1-204ENST00000422070 MYO5BQ9ULV0 1848 aa25.97■■□□□ 1.75
RBFOX1-204ENST00000422070 FBXO31Q5XUX0 539 aaPredicted RBP25.96■■□□□ 1.75
RBFOX1-204ENST00000422070 POLR3GLQ9BT43 218 aa25.96■■□□□ 1.75
RBFOX1-204ENST00000422070 KTN1Q86UP2 1357 aaKnown RBP25.96■■□□□ 1.75
RBFOX1-204ENST00000422070 CDCA8Q53HL2 280 aa25.95■■□□□ 1.74
RBFOX1-204ENST00000422070 ZMYM3Q14202 1370 aa25.94■■□□□ 1.74
RBFOX1-204ENST00000422070 MLECQ14165 292 aa25.92■■□□□ 1.74
RBFOX1-204ENST00000422070 ESF1Q9H501 851 aaKnown RBP25.92■■□□□ 1.74
RBFOX1-204ENST00000422070 KDM5AP29375 1690 aaKnown RBP25.91■■□□□ 1.74
RBFOX1-204ENST00000422070 A2ML1A8K2U0 1454 aa25.9■■□□□ 1.74
RBFOX1-204ENST00000422070 TRHP20396 242 aaPredicted RBP25.87■■□□□ 1.73
RBFOX1-204ENST00000422070 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
RBFOX1-204ENST00000422070 PER1O15534 1290 aaPredicted RBP25.83■■□□□ 1.73
RBFOX1-204ENST00000422070 MYOM1P52179 1685 aa25.83■■□□□ 1.73
RBFOX1-204ENST00000422070 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
RBFOX1-204ENST00000422070 ASXL1Q8IXJ9 1541 aa25.83■■□□□ 1.72
RBFOX1-204ENST00000422070 QRICH2Q9H0J4 1663 aa25.82■■□□□ 1.72
RBFOX1-204ENST00000422070 ARHGEF28Q8N1W1 1705 aaKnown RBP25.82■■□□□ 1.72
RBFOX1-204ENST00000422070 RALBP1Q15311 655 aa25.82■■□□□ 1.72
RBFOX1-204ENST00000422070 TNRQ92752 1358 aa25.81■■□□□ 1.72
RBFOX1-204ENST00000422070 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
RBFOX1-204ENST00000422070 PARD3Q8TEW0 1356 aa25.78■■□□□ 1.72
RBFOX1-204ENST00000422070 RIMS2Q9UQ26 1411 aa25.78■■□□□ 1.72
RBFOX1-204ENST00000422070 MRS2Q9HD23 443 aa25.77■■□□□ 1.72
RBFOX1-204ENST00000422070 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
RBFOX1-204ENST00000422070 SCAF1Q9H7N4 1312 aaKnown RBP25.77■■□□□ 1.72
RBFOX1-204ENST00000422070 NLRP1Q9C000 1473 aa25.76■■□□□ 1.71
RBFOX1-204ENST00000422070 PANK3Q9H999 370 aa25.76■■□□□ 1.71
RBFOX1-204ENST00000422070 CCDC184Q52MB2 194 aa25.75■■□□□ 1.71
RBFOX1-204ENST00000422070 NUTM2DQ5VT03 806 aaPredicted RBP25.75■■□□□ 1.71
RBFOX1-204ENST00000422070 FER1L4A9Z1Z3 1794 aa25.75■■□□□ 1.71
RBFOX1-204ENST00000422070 TMEM132EQ6IEE7 984 aa25.74■■□□□ 1.71
RBFOX1-204ENST00000422070 TRAK1Q9UPV9 953 aa25.74■■□□□ 1.71
RBFOX1-204ENST00000422070 MYBBP1AQ9BQG0 1328 aaKnown RBP25.74■■□□□ 1.71
RBFOX1-204ENST00000422070 UBR1Q8IWV7 1749 aa25.73■■□□□ 1.71
RBFOX1-204ENST00000422070 PUS7Q96PZ0 661 aaKnown RBP25.73■■□□□ 1.71
RBFOX1-204ENST00000422070 C3P01024 1663 aa25.73■■□□□ 1.71
RBFOX1-204ENST00000422070 SETD1AO15047 1707 aaKnown RBP25.72■■□□□ 1.71
RBFOX1-204ENST00000422070 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.72■■□□□ 1.71
RBFOX1-204ENST00000422070 BRD4O60885 1362 aaPredicted RBP25.72■■□□□ 1.71
RBFOX1-204ENST00000422070 NPC1L1Q9UHC9 1359 aa25.71■■□□□ 1.71
RBFOX1-204ENST00000422070 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
RBFOX1-204ENST00000422070 YTHDC2Q9H6S0 1430 aaKnown RBP25.7■■□□□ 1.7
RBFOX1-204ENST00000422070 PTPRMP28827 1452 aa25.69■■□□□ 1.7
RBFOX1-204ENST00000422070 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
RBFOX1-204ENST00000422070 NRXN3Q9Y4C0 1643 aa25.68■■□□□ 1.7
RBFOX1-204ENST00000422070 HDGFP51858 240 aaKnown RBP25.67■■□□□ 1.7
RBFOX1-204ENST00000422070 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
RBFOX1-204ENST00000422070 TMEM2Q9UHN6 1383 aa25.65■■□□□ 1.7
RBFOX1-204ENST00000422070 TULP4Q9NRJ4 1543 aa25.65■■□□□ 1.7
RBFOX1-204ENST00000422070 NLRP13Q86W25 1043 aa25.64■■□□□ 1.69
RBFOX1-204ENST00000422070 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
RBFOX1-204ENST00000422070 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
RBFOX1-204ENST00000422070 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
RBFOX1-204ENST00000422070 AMER1Q5JTC6 1135 aaPredicted RBP25.61■■□□□ 1.69
RBFOX1-204ENST00000422070 HNRNPUQ00839 825 aaKnown RBP eCLIP25.6■■□□□ 1.69
RBFOX1-204ENST00000422070 TMC1Q8TDI8 760 aa25.59■■□□□ 1.69
RBFOX1-204ENST00000422070 FAM9BQ8IZU0 186 aa25.58■■□□□ 1.69
RBFOX1-204ENST00000422070 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.69
RBFOX1-204ENST00000422070 KNDC1Q76NI1 1749 aa25.58■■□□□ 1.69
RBFOX1-204ENST00000422070 ABCC11Q96J66 1382 aa25.58■■□□□ 1.69
RBFOX1-204ENST00000422070 SLIT1O75093 1534 aa25.58■■□□□ 1.69
RBFOX1-204ENST00000422070 NINLQ9Y2I6 1382 aa25.57■■□□□ 1.68
RBFOX1-204ENST00000422070 ARHGAP23Q9P227 1491 aa25.56■■□□□ 1.68
RBFOX1-204ENST00000422070 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
RBFOX1-204ENST00000422070 TECPR2O15040 1411 aa25.55■■□□□ 1.68
RBFOX1-204ENST00000422070 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
RBFOX1-204ENST00000422070 CC2D1BQ5T0F9 858 aaKnown RBP25.55■■□□□ 1.68
RBFOX1-204ENST00000422070 INSRP06213 1382 aa25.54■■□□□ 1.68
RBFOX1-204ENST00000422070 PLEKHG1Q9ULL1 1385 aa25.54■■□□□ 1.68
RBFOX1-204ENST00000422070 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
RBFOX1-204ENST00000422070 CEBPAP49715 358 aaPredicted RBP25.52■■□□□ 1.68
RBFOX1-204ENST00000422070 STK26Q9P289 416 aa25.52■■□□□ 1.68
RBFOX1-204ENST00000422070 PRAM1Q96QH2 718 aa25.52■■□□□ 1.68
RBFOX1-204ENST00000422070 ADAMTSL3P82987 1691 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms