RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 PTPREP23469 700 aa8.69□□□□□ -1.02
GAPDHP49-201ENST00000421421 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
GAPDHP49-201ENST00000421421 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
GAPDHP49-201ENST00000421421 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
GAPDHP49-201ENST00000421421 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
GAPDHP49-201ENST00000421421 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
GAPDHP49-201ENST00000421421 MAP3K7O43318 606 aa8.67□□□□□ -1.02
GAPDHP49-201ENST00000421421 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
GAPDHP49-201ENST00000421421 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
GAPDHP49-201ENST00000421421 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
GAPDHP49-201ENST00000421421 Q6ZNB5 142 aa8.66□□□□□ -1.02
GAPDHP49-201ENST00000421421 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
GAPDHP49-201ENST00000421421 PCDHGA10Q9Y5H3 936 aa8.65□□□□□ -1.02
GAPDHP49-201ENST00000421421 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
GAPDHP49-201ENST00000421421 MS4A1P11836 297 aa8.64□□□□□ -1.03
GAPDHP49-201ENST00000421421 FOSBP53539 338 aa8.64□□□□□ -1.03
GAPDHP49-201ENST00000421421 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
GAPDHP49-201ENST00000421421 WDR62O43379 1518 aa8.64□□□□□ -1.03
GAPDHP49-201ENST00000421421 KIF21AQ7Z4S6 1674 aa8.63□□□□□ -1.03
GAPDHP49-201ENST00000421421 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
GAPDHP49-201ENST00000421421 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
GAPDHP49-201ENST00000421421 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
GAPDHP49-201ENST00000421421 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
GAPDHP49-201ENST00000421421 CLCN1P35523 988 aa8.61□□□□□ -1.03
GAPDHP49-201ENST00000421421 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
GAPDHP49-201ENST00000421421 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
GAPDHP49-201ENST00000421421 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
GAPDHP49-201ENST00000421421 FBXW7Q969H0 707 aa8.6□□□□□ -1.03
GAPDHP49-201ENST00000421421 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 FLIIQ13045 1269 aa8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 ZDHHC16Q969W1 377 aa8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
GAPDHP49-201ENST00000421421 FANCD2Q9BXW9 1451 aa8.58□□□□□ -1.04
GAPDHP49-201ENST00000421421 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
GAPDHP49-201ENST00000421421 CFTRP13569 1480 aa8.57□□□□□ -1.04
GAPDHP49-201ENST00000421421 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
GAPDHP49-201ENST00000421421 NYAP1Q6ZVC0 841 aa8.57□□□□□ -1.04
GAPDHP49-201ENST00000421421 ADAM33Q9BZ11 813 aa8.57□□□□□ -1.04
GAPDHP49-201ENST00000421421 SSTR3P32745 418 aaPredicted RBP8.56□□□□□ -1.04
GAPDHP49-201ENST00000421421 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
GAPDHP49-201ENST00000421421 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
GAPDHP49-201ENST00000421421 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
GAPDHP49-201ENST00000421421 OATP04181 439 aa8.55□□□□□ -1.04
GAPDHP49-201ENST00000421421 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
GAPDHP49-201ENST00000421421 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
GAPDHP49-201ENST00000421421 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
GAPDHP49-201ENST00000421421 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
GAPDHP49-201ENST00000421421 METTL3Q86U44 580 aaKnown RBP8.54□□□□□ -1.04
GAPDHP49-201ENST00000421421 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
GAPDHP49-201ENST00000421421 WIZO95785 1651 aa8.53□□□□□ -1.04
GAPDHP49-201ENST00000421421 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
GAPDHP49-201ENST00000421421 KCNC4Q03721 635 aa8.53□□□□□ -1.04
GAPDHP49-201ENST00000421421 LAPTM4BQ86VI4 370 aa8.53□□□□□ -1.04
GAPDHP49-201ENST00000421421 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
GAPDHP49-201ENST00000421421 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 BCAMP50895 628 aa8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 PXYLP1Q8TE99 480 aa8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
GAPDHP49-201ENST00000421421 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
GAPDHP49-201ENST00000421421 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
GAPDHP49-201ENST00000421421 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
GAPDHP49-201ENST00000421421 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
GAPDHP49-201ENST00000421421 PROX2Q3B8N5 592 aa8.49□□□□□ -1.05
GAPDHP49-201ENST00000421421 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
GAPDHP49-201ENST00000421421 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
GAPDHP49-201ENST00000421421 PRSS12P56730 875 aa8.48□□□□□ -1.05
GAPDHP49-201ENST00000421421 ATP1B4Q9UN42 357 aaPredicted RBP8.48□□□□□ -1.05
GAPDHP49-201ENST00000421421 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
GAPDHP49-201ENST00000421421 GFRA3O60609 400 aa8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 PROCA1Q8NCQ7 364 aaPredicted RBP8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 ZFRQ96KR1 1074 aaKnown RBP8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 POLR3EQ9NVU0 708 aa8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
GAPDHP49-201ENST00000421421 LCE2BO14633 110 aa8.46□□□□□ -1.06
GAPDHP49-201ENST00000421421 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.06
GAPDHP49-201ENST00000421421 CDCA7LQ96GN5 454 aa8.46□□□□□ -1.06
GAPDHP49-201ENST00000421421 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
GAPDHP49-201ENST00000421421 RIMBP3CA6NJZ7 1639 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 RIMBP3BA6NNM3 1639 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 RIMBP3Q9UFD9 1639 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 A6NJR5 290 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 ARID3CA6NKF2 412 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 MCM6Q14566 821 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 CLUAP1Q96AJ1 413 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 ARID3AQ99856 593 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 IFT140Q96RY7 1462 aa8.45□□□□□ -1.06
GAPDHP49-201ENST00000421421 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
GAPDHP49-201ENST00000421421 APBB1O00213 710 aa8.44□□□□□ -1.06
GAPDHP49-201ENST00000421421 COL9A1P20849 921 aa8.44□□□□□ -1.06
GAPDHP49-201ENST00000421421 KIAA1468Q9P260 1216 aa8.43□□□□□ -1.06
GAPDHP49-201ENST00000421421 TOP2AP11388 1531 aaKnown RBP8.43□□□□□ -1.06
GAPDHP49-201ENST00000421421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
GAPDHP49-201ENST00000421421 TRAK2O60296 914 aa8.42□□□□□ -1.06
GAPDHP49-201ENST00000421421 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms