RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
SNCA-206ENST00000420646 RALBP1Q15311 655 aa11.91□□□□□ -0.5
SNCA-206ENST00000420646 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
SNCA-206ENST00000420646 HECW2Q9P2P5 1572 aa11.91□□□□□ -0.5
SNCA-206ENST00000420646 IDI1Q13907 227 aa11.9□□□□□ -0.5
SNCA-206ENST00000420646 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
SNCA-206ENST00000420646 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
SNCA-206ENST00000420646 EIF2AK4Q9P2K8 1649 aaKnown RBP11.9□□□□□ -0.5
SNCA-206ENST00000420646 SAFB2Q14151 953 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNCA-206ENST00000420646 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
SNCA-206ENST00000420646 NLRP13Q86W25 1043 aa11.89□□□□□ -0.51
SNCA-206ENST00000420646 PARD3Q8TEW0 1356 aa11.88□□□□□ -0.51
SNCA-206ENST00000420646 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
SNCA-206ENST00000420646 NEO1Q92859 1461 aa11.88□□□□□ -0.51
SNCA-206ENST00000420646 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
SNCA-206ENST00000420646 MROH2AA6NES4 1674 aa11.88□□□□□ -0.51
SNCA-206ENST00000420646 STK26Q9P289 416 aa11.86□□□□□ -0.51
SNCA-206ENST00000420646 ABCC3O15438 1527 aa11.86□□□□□ -0.51
SNCA-206ENST00000420646 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
SNCA-206ENST00000420646 DIP2CQ9Y2E4 1556 aa11.86□□□□□ -0.51
SNCA-206ENST00000420646 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
SNCA-206ENST00000420646 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
SNCA-206ENST00000420646 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
SNCA-206ENST00000420646 LAMC1P11047 1609 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 CARD14Q9BXL6 1004 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 LMTK2Q8IWU2 1503 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 KIF1BO60333 1816 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
SNCA-206ENST00000420646 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 SLC12A5Q9H2X9 1139 aa11.84□□□□□ -0.51
SNCA-206ENST00000420646 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
SNCA-206ENST00000420646 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.51
SNCA-206ENST00000420646 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
SNCA-206ENST00000420646 IQGAP1P46940 1657 aa11.83□□□□□ -0.52
SNCA-206ENST00000420646 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
SNCA-206ENST00000420646 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
SNCA-206ENST00000420646 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
SNCA-206ENST00000420646 CENPJQ9HC77 1338 aaPredicted RBP11.82□□□□□ -0.52
SNCA-206ENST00000420646 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
SNCA-206ENST00000420646 EIF3AQ14152 1382 aaKnown RBP11.82□□□□□ -0.52
SNCA-206ENST00000420646 ADGRB3O60242 1522 aa11.81□□□□□ -0.52
SNCA-206ENST00000420646 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
SNCA-206ENST00000420646 MYOM2P54296 1465 aa11.81□□□□□ -0.52
SNCA-206ENST00000420646 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
SNCA-206ENST00000420646 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
SNCA-206ENST00000420646 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 SYNMO15061 1565 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 DIP2BQ9P265 1576 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 CAMSAP1Q5T5Y3 1602 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
SNCA-206ENST00000420646 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
SNCA-206ENST00000420646 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
SNCA-206ENST00000420646 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
SNCA-206ENST00000420646 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
SNCA-206ENST00000420646 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
SNCA-206ENST00000420646 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
SNCA-206ENST00000420646 GLI2P10070 1586 aa11.75□□□□□ -0.53
SNCA-206ENST00000420646 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
SNCA-206ENST00000420646 WDR43Q15061 677 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNCA-206ENST00000420646 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
SNCA-206ENST00000420646 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
SNCA-206ENST00000420646 PPLO60437 1756 aa11.74□□□□□ -0.53
SNCA-206ENST00000420646 PLIN1O60240 522 aa11.74□□□□□ -0.53
SNCA-206ENST00000420646 MYOM1P52179 1685 aa11.74□□□□□ -0.53
SNCA-206ENST00000420646 ASXL1Q8IXJ9 1541 aa11.73□□□□□ -0.53
SNCA-206ENST00000420646 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
SNCA-206ENST00000420646 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
SNCA-206ENST00000420646 NEXMIFQ5QGS0 1516 aa11.73□□□□□ -0.53
SNCA-206ENST00000420646 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
SNCA-206ENST00000420646 SRPK2P78362 688 aaKnown RBP11.72□□□□□ -0.53
SNCA-206ENST00000420646 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
SNCA-206ENST00000420646 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
SNCA-206ENST00000420646 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
SNCA-206ENST00000420646 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.53
SNCA-206ENST00000420646 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.53
SNCA-206ENST00000420646 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
SNCA-206ENST00000420646 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
SNCA-206ENST00000420646 MORC1Q86VD1 984 aa11.71□□□□□ -0.54
SNCA-206ENST00000420646 POGKQ9P215 609 aa11.71□□□□□ -0.54
SNCA-206ENST00000420646 PLEKHH1Q9ULM0 1364 aa11.7□□□□□ -0.54
SNCA-206ENST00000420646 APAF1O14727 1248 aa11.7□□□□□ -0.54
SNCA-206ENST00000420646 ESF1Q9H501 851 aaKnown RBP11.7□□□□□ -0.54
SNCA-206ENST00000420646 CEBPAP49715 358 aaPredicted RBP11.69□□□□□ -0.54
SNCA-206ENST00000420646 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
SNCA-206ENST00000420646 SPINK5Q9NQ38 1064 aaPredicted RBP11.69□□□□□ -0.54
SNCA-206ENST00000420646 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
SNCA-206ENST00000420646 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
SNCA-206ENST00000420646 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
SNCA-206ENST00000420646 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1833.5 ms