RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 PTPRTO14522 1441 aa7.42□□□□□ -1.22
PMS1-207ENST00000420421 GGT6Q6P531 493 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 WASHC2CQ9Y4E1 1318 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 CNTLNQ9NXG0 1405 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 ABCC3O15438 1527 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 TRPM2O94759 1503 aa7.41□□□□□ -1.22
PMS1-207ENST00000420421 RGL2O15211 777 aa7.4□□□□□ -1.22
PMS1-207ENST00000420421 CCDC144AA2RUR9 1427 aa7.4□□□□□ -1.22
PMS1-207ENST00000420421 NEUROD1Q13562 356 aa7.39□□□□□ -1.23
PMS1-207ENST00000420421 SIN3AQ96ST3 1273 aa7.39□□□□□ -1.23
PMS1-207ENST00000420421 ESF1Q9H501 851 aaKnown RBP7.39□□□□□ -1.23
PMS1-207ENST00000420421 SIGLEC1Q9BZZ2 1709 aa7.38□□□□□ -1.23
PMS1-207ENST00000420421 CLTCQ00610 1675 aaKnown RBP7.38□□□□□ -1.23
PMS1-207ENST00000420421 PREX1Q8TCU6 1659 aa7.38□□□□□ -1.23
PMS1-207ENST00000420421 PPP1R15AO75807 674 aaPredicted RBP7.38□□□□□ -1.23
PMS1-207ENST00000420421 SLC52A1Q9NWF4 448 aa7.38□□□□□ -1.23
PMS1-207ENST00000420421 FER1L4A9Z1Z3 1794 aa7.38□□□□□ -1.23
PMS1-207ENST00000420421 PLA2R1Q13018 1463 aa7.37□□□□□ -1.23
PMS1-207ENST00000420421 NOS1P29475 1434 aa7.37□□□□□ -1.23
PMS1-207ENST00000420421 NPATQ14207 1427 aa7.37□□□□□ -1.23
PMS1-207ENST00000420421 PIK3C2BO00750 1634 aa7.37□□□□□ -1.23
PMS1-207ENST00000420421 KDM5AP29375 1690 aaKnown RBP7.36□□□□□ -1.23
PMS1-207ENST00000420421 CLTCL1P53675 1640 aa7.35□□□□□ -1.23
PMS1-207ENST00000420421 ARID4BQ4LE39 1312 aaPredicted RBP7.35□□□□□ -1.23
PMS1-207ENST00000420421 SPATA31D1Q6ZQQ2 1576 aa7.35□□□□□ -1.23
PMS1-207ENST00000420421 CHGAP10645 457 aaKnown RBP7.35□□□□□ -1.23
PMS1-207ENST00000420421 IFT172Q9UG01 1749 aa7.35□□□□□ -1.23
PMS1-207ENST00000420421 UHRF1BP1Q6BDS2 1440 aa7.35□□□□□ -1.23
PMS1-207ENST00000420421 RPGRIP1LQ68CZ1 1315 aa7.34□□□□□ -1.23
PMS1-207ENST00000420421 L3MBTL2Q969R5 705 aa7.34□□□□□ -1.23
PMS1-207ENST00000420421 KIAA1210Q9ULL0 1709 aa7.34□□□□□ -1.23
PMS1-207ENST00000420421 SPATA31E1Q6ZUB1 1445 aa7.34□□□□□ -1.23
PMS1-207ENST00000420421 MYO5BQ9ULV0 1848 aa7.34□□□□□ -1.24
PMS1-207ENST00000420421 ZMYM3Q14202 1370 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 PPLO60437 1756 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 C3P01024 1663 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 ADAMTSL3P82987 1691 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 ERVK-7P63135 1459 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 SYNMO15061 1565 aa7.33□□□□□ -1.24
PMS1-207ENST00000420421 HOMEZQ8IX15 550 aa7.32□□□□□ -1.24
PMS1-207ENST00000420421 ADGRB3O60242 1522 aa7.32□□□□□ -1.24
PMS1-207ENST00000420421 LAMC1P11047 1609 aa7.31□□□□□ -1.24
PMS1-207ENST00000420421 MLECQ14165 292 aa7.31□□□□□ -1.24
PMS1-207ENST00000420421 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 MYOM2P54296 1465 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 HDGFP51858 240 aaKnown RBP7.3□□□□□ -1.24
PMS1-207ENST00000420421 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 PLCD3Q8N3E9 789 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 DCAF11Q8TEB1 546 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 TRPM1Q7Z4N2 1603 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
PMS1-207ENST00000420421 ZFYVE9O95405 1425 aa7.29□□□□□ -1.24
PMS1-207ENST00000420421 VGFO15240 615 aaPredicted RBP7.29□□□□□ -1.24
PMS1-207ENST00000420421 IDI1Q13907 227 aa7.29□□□□□ -1.24
PMS1-207ENST00000420421 STAG3Q9UJ98 1225 aa7.29□□□□□ -1.24
PMS1-207ENST00000420421 POLR1AO95602 1720 aaPredicted RBP7.29□□□□□ -1.24
PMS1-207ENST00000420421 RIMS1Q86UR5 1692 aaKnown RBP7.28□□□□□ -1.24
PMS1-207ENST00000420421 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
PMS1-207ENST00000420421 MADDQ8WXG6 1647 aa7.28□□□□□ -1.24
PMS1-207ENST00000420421 ZNF316A6NFI3 1004 aaPredicted RBP7.28□□□□□ -1.24
PMS1-207ENST00000420421 RGL3Q3MIN7 710 aa7.28□□□□□ -1.24
PMS1-207ENST00000420421 TNRQ92752 1358 aa7.28□□□□□ -1.24
PMS1-207ENST00000420421 RALGAPBQ86X10 1494 aa7.28□□□□□ -1.24
PMS1-207ENST00000420421 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
PMS1-207ENST00000420421 EIF4G2P78344 907 aaKnown RBP eCLIP7.27□□□□□ -1.25
PMS1-207ENST00000420421 POLA2Q14181 598 aa7.27□□□□□ -1.25
PMS1-207ENST00000420421 C14orf37Q86TY3 774 aa7.27□□□□□ -1.25
PMS1-207ENST00000420421 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.27□□□□□ -1.25
PMS1-207ENST00000420421 NRXN1Q9ULB1 1477 aa7.27□□□□□ -1.25
PMS1-207ENST00000420421 UGGT1Q9NYU2 1555 aa7.26□□□□□ -1.25
PMS1-207ENST00000420421 GPRASP1Q5JY77 1395 aa7.26□□□□□ -1.25
PMS1-207ENST00000420421 NBPF8Q3BBV2 869 aa7.26□□□□□ -1.25
PMS1-207ENST00000420421 ZNF326Q5BKZ1 582 aaKnown RBP7.26□□□□□ -1.25
PMS1-207ENST00000420421 FBXO31Q5XUX0 539 aaPredicted RBP7.26□□□□□ -1.25
PMS1-207ENST00000420421 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
PMS1-207ENST00000420421 NEXMIFQ5QGS0 1516 aa7.26□□□□□ -1.25
PMS1-207ENST00000420421 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
PMS1-207ENST00000420421 SETBP1Q9Y6X0 1596 aa7.25□□□□□ -1.25
PMS1-207ENST00000420421 A2ML1A8K2U0 1454 aa7.25□□□□□ -1.25
PMS1-207ENST00000420421 HS6ST3Q8IZP7 471 aa7.24□□□□□ -1.25
PMS1-207ENST00000420421 THEMISQ8N1K5 641 aaPredicted RBP7.24□□□□□ -1.25
PMS1-207ENST00000420421 MYO3AQ8NEV4 1616 aa7.23□□□□□ -1.25
PMS1-207ENST00000420421 ROCK2O75116 1388 aaKnown RBP7.23□□□□□ -1.25
PMS1-207ENST00000420421 IQGAP1P46940 1657 aa7.23□□□□□ -1.25
PMS1-207ENST00000420421 CARD11Q9BXL7 1154 aa7.23□□□□□ -1.25
PMS1-207ENST00000420421 C14orf93Q9H972 538 aaKnown RBP7.23□□□□□ -1.25
PMS1-207ENST00000420421 PIK3C2GO75747 1445 aa7.23□□□□□ -1.25
PMS1-207ENST00000420421 SLIT1O75093 1534 aa7.22□□□□□ -1.25
PMS1-207ENST00000420421 RIMS2Q9UQ26 1411 aa7.22□□□□□ -1.25
PMS1-207ENST00000420421 MIER1Q8N108 512 aa7.22□□□□□ -1.25
PMS1-207ENST00000420421 ZBTB12Q9Y330 459 aaPredicted RBP7.22□□□□□ -1.25
PMS1-207ENST00000420421 EIF3AQ14152 1382 aaKnown RBP7.21□□□□□ -1.25
PMS1-207ENST00000420421 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.25
PMS1-207ENST00000420421 CEP170BQ9Y4F5 1589 aaPredicted RBP7.21□□□□□ -1.25
PMS1-207ENST00000420421 EID1Q9Y6B2 187 aa7.21□□□□□ -1.26
PMS1-207ENST00000420421 PTPRMP28827 1452 aa7.21□□□□□ -1.26
PMS1-207ENST00000420421 SCAF11Q99590 1463 aaKnown RBP7.21□□□□□ -1.26
PMS1-207ENST00000420421 ARHGAP23Q9P227 1491 aa7.21□□□□□ -1.26
PMS1-207ENST00000420421 ADGRF5Q8IZF2 1346 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms