RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 NLRP1Q9C000 1473 aa14.55□□□□□ -0.08
PHF3-203ENST00000420043 LMTK2Q8IWU2 1503 aa14.55□□□□□ -0.08
PHF3-203ENST00000420043 NEURL4Q96JN8 1562 aa14.55□□□□□ -0.08
PHF3-203ENST00000420043 E9PCH4 1651 aa14.55□□□□□ -0.08
PHF3-203ENST00000420043 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
PHF3-203ENST00000420043 CFAP65Q6ZU64 1925 aaKnown RBP14.53□□□□□ -0.08
PHF3-203ENST00000420043 TRPM2O94759 1503 aa14.53□□□□□ -0.08
PHF3-203ENST00000420043 EFCAB6Q5THR3 1501 aa14.53□□□□□ -0.08
PHF3-203ENST00000420043 PIP4K2BP78356 416 aa14.53□□□□□ -0.08
PHF3-203ENST00000420043 ERVK-7P63135 1459 aa14.52□□□□□ -0.08
PHF3-203ENST00000420043 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
PHF3-203ENST00000420043 HIRIP3Q9BW71 556 aaPredicted RBP14.52□□□□□ -0.09
PHF3-203ENST00000420043 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
PHF3-203ENST00000420043 CEP152O94986 1710 aa14.51□□□□□ -0.09
PHF3-203ENST00000420043 POLR1AO95602 1720 aaPredicted RBP14.51□□□□□ -0.09
PHF3-203ENST00000420043 SPHKAPQ2M3C7 1700 aa14.51□□□□□ -0.09
PHF3-203ENST00000420043 SPATA31D1Q6ZQQ2 1576 aa14.51□□□□□ -0.09
PHF3-203ENST00000420043 ZC3H13Q5T200 1668 aaKnown RBP14.49□□□□□ -0.09
PHF3-203ENST00000420043 LTKP29376 864 aa14.48□□□□□ -0.09
PHF3-203ENST00000420043 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
PHF3-203ENST00000420043 MED14O60244 1454 aa14.47□□□□□ -0.09
PHF3-203ENST00000420043 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
PHF3-203ENST00000420043 TOM1O60784 492 aa14.47□□□□□ -0.09
PHF3-203ENST00000420043 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
PHF3-203ENST00000420043 TXNDC2Q86VQ3 553 aa14.47□□□□□ -0.09
PHF3-203ENST00000420043 CLTCL1P53675 1640 aa14.46□□□□□ -0.09
PHF3-203ENST00000420043 HSPA1LP34931 641 aa14.46□□□□□ -0.09
PHF3-203ENST00000420043 STAC3Q96MF2 364 aa14.46□□□□□ -0.09
PHF3-203ENST00000420043 CPS1P31327 1500 aa14.46□□□□□ -0.1
PHF3-203ENST00000420043 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
PHF3-203ENST00000420043 SPATA31E1Q6ZUB1 1445 aa14.45□□□□□ -0.1
PHF3-203ENST00000420043 CARD11Q9BXL7 1154 aa14.45□□□□□ -0.1
PHF3-203ENST00000420043 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
PHF3-203ENST00000420043 ARHGAP31Q2M1Z3 1444 aa14.44□□□□□ -0.1
PHF3-203ENST00000420043 PRAG1Q86YV5 1406 aa14.44□□□□□ -0.1
PHF3-203ENST00000420043 IDI1Q13907 227 aa14.44□□□□□ -0.1
PHF3-203ENST00000420043 MIER1Q8N108 512 aa14.44□□□□□ -0.1
PHF3-203ENST00000420043 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
PHF3-203ENST00000420043 IQGAP1P46940 1657 aa14.43□□□□□ -0.1
PHF3-203ENST00000420043 CHGAP10645 457 aaKnown RBP14.43□□□□□ -0.1
PHF3-203ENST00000420043 USP47Q96K76 1375 aa14.43□□□□□ -0.1
PHF3-203ENST00000420043 UBR1Q8IWV7 1749 aa14.43□□□□□ -0.1
PHF3-203ENST00000420043 EID1Q9Y6B2 187 aa14.42□□□□□ -0.1
PHF3-203ENST00000420043 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
PHF3-203ENST00000420043 STRCP1A6NGW2 1772 aa14.39□□□□□ -0.11
PHF3-203ENST00000420043 ARHGAP23Q9P227 1491 aa14.39□□□□□ -0.11
PHF3-203ENST00000420043 SOCS7O14512 581 aa14.39□□□□□ -0.11
PHF3-203ENST00000420043 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
PHF3-203ENST00000420043 NOS1P29475 1434 aa14.39□□□□□ -0.11
PHF3-203ENST00000420043 KIF1BO60333 1816 aa14.38□□□□□ -0.11
PHF3-203ENST00000420043 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
PHF3-203ENST00000420043 TMEM2Q9UHN6 1383 aa14.38□□□□□ -0.11
PHF3-203ENST00000420043 SLIT1O75093 1534 aa14.37□□□□□ -0.11
PHF3-203ENST00000420043 SLC26A8Q96RN1 970 aa14.37□□□□□ -0.11
PHF3-203ENST00000420043 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
PHF3-203ENST00000420043 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
PHF3-203ENST00000420043 RBM33Q96EV2 1170 aaKnown RBP14.36□□□□□ -0.11
PHF3-203ENST00000420043 SLC52A1Q9NWF4 448 aa14.36□□□□□ -0.11
PHF3-203ENST00000420043 WASHC2AQ641Q2 1341 aa14.36□□□□□ -0.11
PHF3-203ENST00000420043 CCDC7Q96M83 1385 aa14.35□□□□□ -0.11
PHF3-203ENST00000420043 BCANQ96GW7 911 aa14.35□□□□□ -0.11
PHF3-203ENST00000420043 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
PHF3-203ENST00000420043 ADGRB3O60242 1522 aa14.35□□□□□ -0.11
PHF3-203ENST00000420043 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
PHF3-203ENST00000420043 SYNMO15061 1565 aa14.34□□□□□ -0.11
PHF3-203ENST00000420043 ANP32CO43423 234 aa14.34□□□□□ -0.11
PHF3-203ENST00000420043 NBPF1Q3BBV0 1214 aa14.34□□□□□ -0.11
PHF3-203ENST00000420043 MYOM2P54296 1465 aa14.33□□□□□ -0.12
PHF3-203ENST00000420043 LAMC1P11047 1609 aa14.33□□□□□ -0.12
PHF3-203ENST00000420043 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
PHF3-203ENST00000420043 POLR3GLQ9BT43 218 aa14.32□□□□□ -0.12
PHF3-203ENST00000420043 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
PHF3-203ENST00000420043 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
PHF3-203ENST00000420043 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
PHF3-203ENST00000420043 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
PHF3-203ENST00000420043 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
PHF3-203ENST00000420043 KCNA6P17658 529 aa14.29□□□□□ -0.12
PHF3-203ENST00000420043 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
PHF3-203ENST00000420043 TMEM94Q12767 1356 aa14.29□□□□□ -0.12
PHF3-203ENST00000420043 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
PHF3-203ENST00000420043 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
PHF3-203ENST00000420043 EIF3AQ14152 1382 aaKnown RBP14.27□□□□□ -0.12
PHF3-203ENST00000420043 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
PHF3-203ENST00000420043 IFT172Q9UG01 1749 aa14.26□□□□□ -0.13
PHF3-203ENST00000420043 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
PHF3-203ENST00000420043 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
PHF3-203ENST00000420043 XIRP1Q702N8 1843 aaKnown RBP14.25□□□□□ -0.13
PHF3-203ENST00000420043 KDM5AP29375 1690 aaKnown RBP14.25□□□□□ -0.13
PHF3-203ENST00000420043 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
PHF3-203ENST00000420043 TMF1P82094 1093 aa14.24□□□□□ -0.13
PHF3-203ENST00000420043 PPLO60437 1756 aa14.24□□□□□ -0.13
PHF3-203ENST00000420043 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
PHF3-203ENST00000420043 CENPBP07199 599 aaPredicted RBP14.23□□□□□ -0.13
PHF3-203ENST00000420043 HDGFP51858 240 aaKnown RBP14.23□□□□□ -0.13
PHF3-203ENST00000420043 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
PHF3-203ENST00000420043 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
PHF3-203ENST00000420043 PIK3C2GO75747 1445 aa14.22□□□□□ -0.13
PHF3-203ENST00000420043 MYO5BQ9ULV0 1848 aa14.22□□□□□ -0.13
PHF3-203ENST00000420043 PLEKHG1Q9ULL1 1385 aa14.22□□□□□ -0.13
PHF3-203ENST00000420043 NEXMIFQ5QGS0 1516 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms