RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 RXRBP28702 533 aa16.89■□□□□ 0.29
RAPGEF1-205ENST00000419442 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
RAPGEF1-205ENST00000419442 NOS1P29475 1434 aa16.88■□□□□ 0.29
RAPGEF1-205ENST00000419442 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
RAPGEF1-205ENST00000419442 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF1-205ENST00000419442 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
RAPGEF1-205ENST00000419442 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
RAPGEF1-205ENST00000419442 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
RAPGEF1-205ENST00000419442 MYO5BQ9ULV0 1848 aa16.85■□□□□ 0.29
RAPGEF1-205ENST00000419442 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
RAPGEF1-205ENST00000419442 KANK1Q14678 1352 aa16.83■□□□□ 0.28
RAPGEF1-205ENST00000419442 RGS12O14924 1447 aa16.82■□□□□ 0.28
RAPGEF1-205ENST00000419442 ABCC5O15440 1437 aa16.8■□□□□ 0.28
RAPGEF1-205ENST00000419442 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
RAPGEF1-205ENST00000419442 SLC52A1Q9NWF4 448 aa16.8■□□□□ 0.28
RAPGEF1-205ENST00000419442 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
RAPGEF1-205ENST00000419442 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
RAPGEF1-205ENST00000419442 AFF2P51816 1311 aa16.79■□□□□ 0.28
RAPGEF1-205ENST00000419442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAPGEF1-205ENST00000419442 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
RAPGEF1-205ENST00000419442 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
RAPGEF1-205ENST00000419442 TMEM131LA2VDJ0 1609 aa16.78■□□□□ 0.28
RAPGEF1-205ENST00000419442 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
RAPGEF1-205ENST00000419442 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
RAPGEF1-205ENST00000419442 RIMS2Q9UQ26 1411 aa16.77■□□□□ 0.27
RAPGEF1-205ENST00000419442 PIK3R4Q99570 1358 aa16.77■□□□□ 0.27
RAPGEF1-205ENST00000419442 RPRD2Q5VT52 1461 aaKnown RBP16.76■□□□□ 0.27
RAPGEF1-205ENST00000419442 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
RAPGEF1-205ENST00000419442 BCANQ96GW7 911 aa16.76■□□□□ 0.27
RAPGEF1-205ENST00000419442 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
RAPGEF1-205ENST00000419442 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
RAPGEF1-205ENST00000419442 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
RAPGEF1-205ENST00000419442 DCCP43146 1447 aa16.74■□□□□ 0.27
RAPGEF1-205ENST00000419442 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-205ENST00000419442 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-205ENST00000419442 ATF3P18847 181 aa16.74■□□□□ 0.27
RAPGEF1-205ENST00000419442 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF1-205ENST00000419442 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
RAPGEF1-205ENST00000419442 DAPK1P53355 1430 aa16.72■□□□□ 0.27
RAPGEF1-205ENST00000419442 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
RAPGEF1-205ENST00000419442 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
RAPGEF1-205ENST00000419442 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
RAPGEF1-205ENST00000419442 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
RAPGEF1-205ENST00000419442 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
RAPGEF1-205ENST00000419442 TRPM2O94759 1503 aa16.7■□□□□ 0.26
RAPGEF1-205ENST00000419442 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
RAPGEF1-205ENST00000419442 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-205ENST00000419442 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
RAPGEF1-205ENST00000419442 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
RAPGEF1-205ENST00000419442 MST1RQ04912 1400 aa16.69■□□□□ 0.26
RAPGEF1-205ENST00000419442 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 SRCAPQ6ZRS2 3230 aa16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
RAPGEF1-205ENST00000419442 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
RAPGEF1-205ENST00000419442 UNC13BO14795 1591 aa16.66■□□□□ 0.26
RAPGEF1-205ENST00000419442 FOXD1Q16676 465 aa16.66■□□□□ 0.26
RAPGEF1-205ENST00000419442 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
RAPGEF1-205ENST00000419442 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
RAPGEF1-205ENST00000419442 LAMC1P11047 1609 aa16.66■□□□□ 0.26
RAPGEF1-205ENST00000419442 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
RAPGEF1-205ENST00000419442 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
RAPGEF1-205ENST00000419442 AMOTL2Q9Y2J4 779 aa16.63■□□□□ 0.25
RAPGEF1-205ENST00000419442 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
RAPGEF1-205ENST00000419442 E9PCH4 1651 aa16.6■□□□□ 0.25
RAPGEF1-205ENST00000419442 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
RAPGEF1-205ENST00000419442 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
RAPGEF1-205ENST00000419442 ATRNO75882 1429 aa16.59■□□□□ 0.25
RAPGEF1-205ENST00000419442 TRPC5Q9UL62 973 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF1-205ENST00000419442 PTCH1Q13635 1447 aa16.58■□□□□ 0.24
RAPGEF1-205ENST00000419442 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
RAPGEF1-205ENST00000419442 LRP5O75197 1615 aa16.57■□□□□ 0.24
RAPGEF1-205ENST00000419442 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF1-205ENST00000419442 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF1-205ENST00000419442 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
RAPGEF1-205ENST00000419442 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
RAPGEF1-205ENST00000419442 DDX17Q92841 729 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-205ENST00000419442 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
RAPGEF1-205ENST00000419442 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
RAPGEF1-205ENST00000419442 USP21Q9UK80 565 aa16.55■□□□□ 0.24
RAPGEF1-205ENST00000419442 MARF1Q9Y4F3 1742 aaKnown RBP16.54■□□□□ 0.24
RAPGEF1-205ENST00000419442 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
RAPGEF1-205ENST00000419442 SOS2Q07890 1332 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF1-205ENST00000419442 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
RAPGEF1-205ENST00000419442 EP400Q96L91 3159 aa16.51■□□□□ 0.23
RAPGEF1-205ENST00000419442 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
RAPGEF1-205ENST00000419442 METP08581 1390 aa16.5■□□□□ 0.23
RAPGEF1-205ENST00000419442 MYOM2P54296 1465 aa16.49■□□□□ 0.23
RAPGEF1-205ENST00000419442 BCL9LQ86UU0 1499 aa16.49■□□□□ 0.23
RAPGEF1-205ENST00000419442 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
RAPGEF1-205ENST00000419442 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF1-205ENST00000419442 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
RAPGEF1-205ENST00000419442 GLI3P10071 1580 aa16.44■□□□□ 0.22
RAPGEF1-205ENST00000419442 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF1-205ENST00000419442 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
RAPGEF1-205ENST00000419442 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
RAPGEF1-205ENST00000419442 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
RAPGEF1-205ENST00000419442 PXDNQ92626 1479 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms