RNA–Protein interactions for RNA: ENST00000419068.1

UCHL3-202, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 5

Gene UCHL3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-202ENST00000419068 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
UCHL3-202ENST00000419068 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
UCHL3-202ENST00000419068 DNAJB2P25686 324 aa11.22□□□□□ -0.61
UCHL3-202ENST00000419068 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
UCHL3-202ENST00000419068 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
UCHL3-202ENST00000419068 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
UCHL3-202ENST00000419068 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
UCHL3-202ENST00000419068 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
UCHL3-202ENST00000419068 PPEF1O14829 653 aaPredicted RBP11.18□□□□□ -0.62
UCHL3-202ENST00000419068 SLC10A3P09131 477 aa11.18□□□□□ -0.62
UCHL3-202ENST00000419068 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
UCHL3-202ENST00000419068 CFHP08603 1231 aa11.16□□□□□ -0.62
UCHL3-202ENST00000419068 GGCXP38435 758 aa11.16□□□□□ -0.62
UCHL3-202ENST00000419068 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
UCHL3-202ENST00000419068 S1PR4O95977 384 aa11.14□□□□□ -0.63
UCHL3-202ENST00000419068 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
UCHL3-202ENST00000419068 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
UCHL3-202ENST00000419068 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
UCHL3-202ENST00000419068 FCHSD2O94868 740 aa11.13□□□□□ -0.63
UCHL3-202ENST00000419068 SLC19A1P41440 591 aa11.12□□□□□ -0.63
UCHL3-202ENST00000419068 FECHP22830 423 aa11.11□□□□□ -0.63
UCHL3-202ENST00000419068 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
UCHL3-202ENST00000419068 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
UCHL3-202ENST00000419068 KMT5BQ4FZB7 885 aa11.1□□□□□ -0.63
UCHL3-202ENST00000419068 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
UCHL3-202ENST00000419068 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
UCHL3-202ENST00000419068 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
UCHL3-202ENST00000419068 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
UCHL3-202ENST00000419068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
UCHL3-202ENST00000419068 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
UCHL3-202ENST00000419068 P3H3Q8IVL6 736 aa11.07□□□□□ -0.64
UCHL3-202ENST00000419068 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
UCHL3-202ENST00000419068 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
UCHL3-202ENST00000419068 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
UCHL3-202ENST00000419068 GPR37O15354 613 aa11.04□□□□□ -0.64
UCHL3-202ENST00000419068 ADH1BP00325 375 aa11.04□□□□□ -0.64
UCHL3-202ENST00000419068 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
UCHL3-202ENST00000419068 SCUBE3Q8IX30 993 aa11.03□□□□□ -0.64
UCHL3-202ENST00000419068 OATP04181 439 aa11.02□□□□□ -0.65
UCHL3-202ENST00000419068 HIC1Q14526 733 aa11.02□□□□□ -0.65
UCHL3-202ENST00000419068 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
UCHL3-202ENST00000419068 NR1I2O75469 434 aa11.01□□□□□ -0.65
UCHL3-202ENST00000419068 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
UCHL3-202ENST00000419068 ZNF598Q86UK7 904 aaKnown RBP11.01□□□□□ -0.65
UCHL3-202ENST00000419068 SLC6A16Q9GZN6 736 aa11□□□□□ -0.65
UCHL3-202ENST00000419068 MYT1Q01538 1121 aa10.99□□□□□ -0.65
UCHL3-202ENST00000419068 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
UCHL3-202ENST00000419068 POTECB2RU33 542 aa10.98□□□□□ -0.65
UCHL3-202ENST00000419068 GNPATO15228 680 aa10.97□□□□□ -0.65
UCHL3-202ENST00000419068 GDF9O60383 454 aa10.97□□□□□ -0.65
UCHL3-202ENST00000419068 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
UCHL3-202ENST00000419068 RDH13Q8NBN7 331 aa10.96□□□□□ -0.65
UCHL3-202ENST00000419068 SPSB2Q99619 263 aa10.96□□□□□ -0.65
UCHL3-202ENST00000419068 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 PRR20EP86478 221 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 PRR20CP86479 221 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 PRR20DP86480 221 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 PRR20BP86481 221 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 PRR20AP86496 221 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 FUT2Q10981 343 aa10.95□□□□□ -0.66
UCHL3-202ENST00000419068 ZNF775Q96BV0 537 aaPredicted RBP10.95□□□□□ -0.66
UCHL3-202ENST00000419068 FAM187AA6NFU0 413 aa10.94□□□□□ -0.66
UCHL3-202ENST00000419068 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
UCHL3-202ENST00000419068 MORN1Q5T089 497 aa10.94□□□□□ -0.66
UCHL3-202ENST00000419068 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
UCHL3-202ENST00000419068 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
UCHL3-202ENST00000419068 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
UCHL3-202ENST00000419068 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
UCHL3-202ENST00000419068 DGAT1O75907 488 aa10.91□□□□□ -0.66
UCHL3-202ENST00000419068 FOXC1Q12948 553 aa10.91□□□□□ -0.66
UCHL3-202ENST00000419068 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
UCHL3-202ENST00000419068 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
UCHL3-202ENST00000419068 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
UCHL3-202ENST00000419068 RSPH4AQ5TD94 716 aa10.89□□□□□ -0.67
UCHL3-202ENST00000419068 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
UCHL3-202ENST00000419068 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
UCHL3-202ENST00000419068 GCGRP47871 477 aa10.87□□□□□ -0.67
UCHL3-202ENST00000419068 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
UCHL3-202ENST00000419068 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
UCHL3-202ENST00000419068 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
UCHL3-202ENST00000419068 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
UCHL3-202ENST00000419068 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
UCHL3-202ENST00000419068 KDM2AQ9Y2K7 1162 aa10.84□□□□□ -0.67
UCHL3-202ENST00000419068 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
UCHL3-202ENST00000419068 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
UCHL3-202ENST00000419068 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
UCHL3-202ENST00000419068 RPIAP49247 311 aa10.79□□□□□ -0.68
UCHL3-202ENST00000419068 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
UCHL3-202ENST00000419068 HLA-CQ95604 372 aa10.79□□□□□ -0.68
UCHL3-202ENST00000419068 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
UCHL3-202ENST00000419068 CD2BP2O95400 341 aaKnown RBP10.75□□□□□ -0.69
UCHL3-202ENST00000419068 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
UCHL3-202ENST00000419068 CD46P15529 392 aa10.74□□□□□ -0.69
UCHL3-202ENST00000419068 MSS51Q4VC12 460 aa10.74□□□□□ -0.69
UCHL3-202ENST00000419068 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
UCHL3-202ENST00000419068 CYP4X1Q8N118 509 aa10.73□□□□□ -0.69
UCHL3-202ENST00000419068 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
UCHL3-202ENST00000419068 GMPR2Q9P2T1 348 aaKnown RBP10.71□□□□□ -0.69
UCHL3-202ENST00000419068 AVPP01185 164 aa10.7□□□□□ -0.7
UCHL3-202ENST00000419068 GUCA2AQ02747 115 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms