RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
HMGA1P6-201ENST00000418454 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
HMGA1P6-201ENST00000418454 UGGT1Q9NYU2 1555 aa14.18□□□□□ -0.14
HMGA1P6-201ENST00000418454 MADDQ8WXG6 1647 aa14.18□□□□□ -0.14
HMGA1P6-201ENST00000418454 USP47Q96K76 1375 aa14.17□□□□□ -0.14
HMGA1P6-201ENST00000418454 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
HMGA1P6-201ENST00000418454 PIK3C2GO75747 1445 aa14.16□□□□□ -0.14
HMGA1P6-201ENST00000418454 CHGAP10645 457 aaKnown RBP14.16□□□□□ -0.14
HMGA1P6-201ENST00000418454 STAG3Q9UJ98 1225 aa14.16□□□□□ -0.14
HMGA1P6-201ENST00000418454 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
HMGA1P6-201ENST00000418454 NEXMIFQ5QGS0 1516 aa14.15□□□□□ -0.14
HMGA1P6-201ENST00000418454 PPLO60437 1756 aa14.14□□□□□ -0.15
HMGA1P6-201ENST00000418454 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
HMGA1P6-201ENST00000418454 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
HMGA1P6-201ENST00000418454 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
HMGA1P6-201ENST00000418454 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
HMGA1P6-201ENST00000418454 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
HMGA1P6-201ENST00000418454 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
HMGA1P6-201ENST00000418454 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
HMGA1P6-201ENST00000418454 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
HMGA1P6-201ENST00000418454 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
HMGA1P6-201ENST00000418454 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
HMGA1P6-201ENST00000418454 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
HMGA1P6-201ENST00000418454 ST20-MTHFSA0A0A6YYL1 179 aa14.09□□□□□ -0.15
HMGA1P6-201ENST00000418454 C3P01024 1663 aa14.09□□□□□ -0.15
HMGA1P6-201ENST00000418454 CFAP65Q6ZU64 1925 aaKnown RBP14.09□□□□□ -0.15
HMGA1P6-201ENST00000418454 RIMS2Q9UQ26 1411 aa14.08□□□□□ -0.15
HMGA1P6-201ENST00000418454 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
HMGA1P6-201ENST00000418454 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
HMGA1P6-201ENST00000418454 CCDC7Q96M83 1385 aa14.08□□□□□ -0.16
HMGA1P6-201ENST00000418454 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
HMGA1P6-201ENST00000418454 SLIT1O75093 1534 aa14.06□□□□□ -0.16
HMGA1P6-201ENST00000418454 TMF1P82094 1093 aa14.06□□□□□ -0.16
HMGA1P6-201ENST00000418454 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
HMGA1P6-201ENST00000418454 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
HMGA1P6-201ENST00000418454 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
HMGA1P6-201ENST00000418454 TESK2Q96S53 571 aa14.05□□□□□ -0.16
HMGA1P6-201ENST00000418454 IQGAP1P46940 1657 aa14.04□□□□□ -0.16
HMGA1P6-201ENST00000418454 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
HMGA1P6-201ENST00000418454 KIF7Q2M1P5 1343 aa14.04□□□□□ -0.16
HMGA1P6-201ENST00000418454 UBR1Q8IWV7 1749 aa14.04□□□□□ -0.16
HMGA1P6-201ENST00000418454 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
HMGA1P6-201ENST00000418454 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
HMGA1P6-201ENST00000418454 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
HMGA1P6-201ENST00000418454 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
HMGA1P6-201ENST00000418454 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
HMGA1P6-201ENST00000418454 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
HMGA1P6-201ENST00000418454 C11orf95C9JLR9 678 aaPredicted RBP14.01□□□□□ -0.17
HMGA1P6-201ENST00000418454 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
HMGA1P6-201ENST00000418454 ALKQ9UM73 1620 aa14.01□□□□□ -0.17
HMGA1P6-201ENST00000418454 TBX22Q9Y458 520 aa14□□□□□ -0.17
HMGA1P6-201ENST00000418454 PTPRMP28827 1452 aa13.99□□□□□ -0.17
HMGA1P6-201ENST00000418454 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
HMGA1P6-201ENST00000418454 RIMS1Q86UR5 1692 aaKnown RBP13.99□□□□□ -0.17
HMGA1P6-201ENST00000418454 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
HMGA1P6-201ENST00000418454 DLC1Q96QB1 1528 aa13.99□□□□□ -0.17
HMGA1P6-201ENST00000418454 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
HMGA1P6-201ENST00000418454 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
HMGA1P6-201ENST00000418454 MYO5BQ9ULV0 1848 aa13.98□□□□□ -0.17
HMGA1P6-201ENST00000418454 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
HMGA1P6-201ENST00000418454 MED14O60244 1454 aa13.97□□□□□ -0.17
HMGA1P6-201ENST00000418454 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
HMGA1P6-201ENST00000418454 YTHDC2Q9H6S0 1430 aaKnown RBP13.97□□□□□ -0.17
HMGA1P6-201ENST00000418454 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
HMGA1P6-201ENST00000418454 ANP32CO43423 234 aa13.96□□□□□ -0.17
HMGA1P6-201ENST00000418454 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
HMGA1P6-201ENST00000418454 TECPR2O15040 1411 aa13.96□□□□□ -0.18
HMGA1P6-201ENST00000418454 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
HMGA1P6-201ENST00000418454 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
HMGA1P6-201ENST00000418454 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
HMGA1P6-201ENST00000418454 LTKP29376 864 aa13.94□□□□□ -0.18
HMGA1P6-201ENST00000418454 TMEM132EQ6IEE7 984 aa13.94□□□□□ -0.18
HMGA1P6-201ENST00000418454 TRAK1Q9UPV9 953 aa13.94□□□□□ -0.18
HMGA1P6-201ENST00000418454 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
HMGA1P6-201ENST00000418454 NINLQ9Y2I6 1382 aa13.93□□□□□ -0.18
HMGA1P6-201ENST00000418454 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
HMGA1P6-201ENST00000418454 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
HMGA1P6-201ENST00000418454 MIER1Q8N108 512 aa13.92□□□□□ -0.18
HMGA1P6-201ENST00000418454 NRXN3Q9Y4C0 1643 aa13.92□□□□□ -0.18
HMGA1P6-201ENST00000418454 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
HMGA1P6-201ENST00000418454 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
HMGA1P6-201ENST00000418454 DISP3Q9P2K9 1392 aa13.9□□□□□ -0.18
HMGA1P6-201ENST00000418454 POGKQ9P215 609 aa13.89□□□□□ -0.19
HMGA1P6-201ENST00000418454 METP08581 1390 aa13.88□□□□□ -0.19
HMGA1P6-201ENST00000418454 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
HMGA1P6-201ENST00000418454 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
HMGA1P6-201ENST00000418454 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
HMGA1P6-201ENST00000418454 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
HMGA1P6-201ENST00000418454 RALBP1Q15311 655 aa13.87□□□□□ -0.19
HMGA1P6-201ENST00000418454 BCANQ96GW7 911 aa13.87□□□□□ -0.19
HMGA1P6-201ENST00000418454 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
HMGA1P6-201ENST00000418454 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
HMGA1P6-201ENST00000418454 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
HMGA1P6-201ENST00000418454 CPS1P31327 1500 aa13.85□□□□□ -0.19
HMGA1P6-201ENST00000418454 PTCH1Q13635 1447 aa13.85□□□□□ -0.19
HMGA1P6-201ENST00000418454 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
HMGA1P6-201ENST00000418454 STK26Q9P289 416 aa13.84□□□□□ -0.19
HMGA1P6-201ENST00000418454 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
HMGA1P6-201ENST00000418454 PANK3Q9H999 370 aa13.83□□□□□ -0.2
HMGA1P6-201ENST00000418454 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms