RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 INSRP06213 1382 aa19.06■□□□□ 0.64
HDAC9-208ENST00000417496 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
HDAC9-208ENST00000417496 PTPRTO14522 1441 aa19.05■□□□□ 0.64
HDAC9-208ENST00000417496 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
HDAC9-208ENST00000417496 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
HDAC9-208ENST00000417496 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
HDAC9-208ENST00000417496 CLTCL1P53675 1640 aa19.04■□□□□ 0.64
HDAC9-208ENST00000417496 TRPM2O94759 1503 aa19.04■□□□□ 0.64
HDAC9-208ENST00000417496 ZFYVE16Q7Z3T8 1539 aa19.03■□□□□ 0.64
HDAC9-208ENST00000417496 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
HDAC9-208ENST00000417496 APAF1O14727 1248 aa19.03■□□□□ 0.64
HDAC9-208ENST00000417496 MS4A1P11836 297 aa19.02■□□□□ 0.64
HDAC9-208ENST00000417496 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.64
HDAC9-208ENST00000417496 UGGT1Q9NYU2 1555 aa19.02■□□□□ 0.64
HDAC9-208ENST00000417496 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.63
HDAC9-208ENST00000417496 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
HDAC9-208ENST00000417496 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
HDAC9-208ENST00000417496 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
HDAC9-208ENST00000417496 KANK1Q14678 1352 aa19■□□□□ 0.63
HDAC9-208ENST00000417496 ASXL1Q8IXJ9 1541 aa19■□□□□ 0.63
HDAC9-208ENST00000417496 FANCAO15360 1455 aa18.99■□□□□ 0.63
HDAC9-208ENST00000417496 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
HDAC9-208ENST00000417496 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
HDAC9-208ENST00000417496 DMRT2Q9Y5R5 561 aa18.99■□□□□ 0.63
HDAC9-208ENST00000417496 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
HDAC9-208ENST00000417496 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
HDAC9-208ENST00000417496 EIF3AQ14152 1382 aaKnown RBP18.97■□□□□ 0.63
HDAC9-208ENST00000417496 BCAR3O75815 825 aa18.97■□□□□ 0.63
HDAC9-208ENST00000417496 KDM2BQ8NHM5 1336 aa18.96■□□□□ 0.63
HDAC9-208ENST00000417496 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
HDAC9-208ENST00000417496 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
HDAC9-208ENST00000417496 SYNMO15061 1565 aa18.96■□□□□ 0.63
HDAC9-208ENST00000417496 RTL5Q5HYW3 569 aaPredicted RBP18.96■□□□□ 0.63
HDAC9-208ENST00000417496 CEP152O94986 1710 aa18.95■□□□□ 0.62
HDAC9-208ENST00000417496 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
HDAC9-208ENST00000417496 PIK3C2GO75747 1445 aa18.94■□□□□ 0.62
HDAC9-208ENST00000417496 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
HDAC9-208ENST00000417496 ERVK-7P63135 1459 aa18.93■□□□□ 0.62
HDAC9-208ENST00000417496 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
HDAC9-208ENST00000417496 MYOM1P52179 1685 aa18.92■□□□□ 0.62
HDAC9-208ENST00000417496 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
HDAC9-208ENST00000417496 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
HDAC9-208ENST00000417496 TET3O43151 1660 aa18.91■□□□□ 0.62
HDAC9-208ENST00000417496 RGS3P49796 1198 aa18.91■□□□□ 0.62
HDAC9-208ENST00000417496 CENPQQ7L2Z9 268 aaPredicted RBP18.91■□□□□ 0.62
HDAC9-208ENST00000417496 DEPDC5O75140 1603 aa18.91■□□□□ 0.62
HDAC9-208ENST00000417496 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
HDAC9-208ENST00000417496 TMEM132EQ6IEE7 984 aa18.91■□□□□ 0.62
HDAC9-208ENST00000417496 NPC1L1Q9UHC9 1359 aa18.9■□□□□ 0.62
HDAC9-208ENST00000417496 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
HDAC9-208ENST00000417496 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
HDAC9-208ENST00000417496 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
HDAC9-208ENST00000417496 NEFMP07197 916 aa18.89■□□□□ 0.61
HDAC9-208ENST00000417496 GGT6Q6P531 493 aa18.89■□□□□ 0.61
HDAC9-208ENST00000417496 VWDEQ8N2E2 1590 aa18.88■□□□□ 0.61
HDAC9-208ENST00000417496 NUTM2DQ5VT03 806 aaPredicted RBP18.88■□□□□ 0.61
HDAC9-208ENST00000417496 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
HDAC9-208ENST00000417496 ARAP3Q8WWN8 1544 aa18.87■□□□□ 0.61
HDAC9-208ENST00000417496 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
HDAC9-208ENST00000417496 NOS1P29475 1434 aa18.86■□□□□ 0.61
HDAC9-208ENST00000417496 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
HDAC9-208ENST00000417496 E9PSI1 815 aa18.85■□□□□ 0.61
HDAC9-208ENST00000417496 KDM5AP29375 1690 aaKnown RBP18.85■□□□□ 0.61
HDAC9-208ENST00000417496 CENPJQ9HC77 1338 aaPredicted RBP18.85■□□□□ 0.61
HDAC9-208ENST00000417496 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
HDAC9-208ENST00000417496 MAP3K4Q9Y6R4 1608 aa18.85■□□□□ 0.61
HDAC9-208ENST00000417496 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
HDAC9-208ENST00000417496 C8orf34Q49A92 452 aa18.84■□□□□ 0.61
HDAC9-208ENST00000417496 WWC1Q8IX03 1113 aa18.84■□□□□ 0.61
HDAC9-208ENST00000417496 ASXL2Q76L83 1435 aa18.84■□□□□ 0.61
HDAC9-208ENST00000417496 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
HDAC9-208ENST00000417496 MORC1Q86VD1 984 aa18.83■□□□□ 0.61
HDAC9-208ENST00000417496 IGHDP01880 384 aa18.83■□□□□ 0.6
HDAC9-208ENST00000417496 MYOM2P54296 1465 aa18.82■□□□□ 0.6
HDAC9-208ENST00000417496 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
HDAC9-208ENST00000417496 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
HDAC9-208ENST00000417496 NSD3Q9BZ95 1437 aa18.81■□□□□ 0.6
HDAC9-208ENST00000417496 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
HDAC9-208ENST00000417496 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
HDAC9-208ENST00000417496 COG6Q9Y2V7 657 aa18.8■□□□□ 0.6
HDAC9-208ENST00000417496 CFAP65Q6ZU64 1925 aaKnown RBP18.8■□□□□ 0.6
HDAC9-208ENST00000417496 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
HDAC9-208ENST00000417496 MROH2AA6NES4 1674 aa18.79■□□□□ 0.6
HDAC9-208ENST00000417496 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
HDAC9-208ENST00000417496 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
HDAC9-208ENST00000417496 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
HDAC9-208ENST00000417496 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
HDAC9-208ENST00000417496 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
HDAC9-208ENST00000417496 MTHFSP49914 203 aa18.77■□□□□ 0.6
HDAC9-208ENST00000417496 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
HDAC9-208ENST00000417496 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
HDAC9-208ENST00000417496 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
HDAC9-208ENST00000417496 NPATQ14207 1427 aa18.77■□□□□ 0.59
HDAC9-208ENST00000417496 POLR3AO14802 1390 aaPredicted RBP18.76■□□□□ 0.59
HDAC9-208ENST00000417496 KIF1BO60333 1816 aa18.76■□□□□ 0.59
HDAC9-208ENST00000417496 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
HDAC9-208ENST00000417496 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
HDAC9-208ENST00000417496 NRXN1Q9ULB1 1477 aa18.75■□□□□ 0.59
HDAC9-208ENST00000417496 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
HDAC9-208ENST00000417496 SBNO2Q9Y2G9 1366 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms