RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
CASP4-202ENST00000417440 BCANQ96GW7 911 aa11.3□□□□□ -0.6
CASP4-202ENST00000417440 MROH1Q8NDA8 1641 aa11.29□□□□□ -0.6
CASP4-202ENST00000417440 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
CASP4-202ENST00000417440 ZC3H13Q5T200 1668 aaKnown RBP11.29□□□□□ -0.6
CASP4-202ENST00000417440 CEP152O94986 1710 aa11.29□□□□□ -0.6
CASP4-202ENST00000417440 KANK1Q14678 1352 aa11.28□□□□□ -0.6
CASP4-202ENST00000417440 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
CASP4-202ENST00000417440 IDI1Q13907 227 aa11.28□□□□□ -0.6
CASP4-202ENST00000417440 SLC26A8Q96RN1 970 aa11.28□□□□□ -0.6
CASP4-202ENST00000417440 MAP3K1Q13233 1512 aa11.28□□□□□ -0.6
CASP4-202ENST00000417440 CFAP65Q6ZU64 1925 aaKnown RBP11.27□□□□□ -0.61
CASP4-202ENST00000417440 DAPK1P53355 1430 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 ERBINQ96RT1 1412 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 STRCP1A6NGW2 1772 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
CASP4-202ENST00000417440 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
CASP4-202ENST00000417440 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
CASP4-202ENST00000417440 UBR1Q8IWV7 1749 aa11.25□□□□□ -0.61
CASP4-202ENST00000417440 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
CASP4-202ENST00000417440 TMEM94Q12767 1356 aa11.24□□□□□ -0.61
CASP4-202ENST00000417440 ARHGAP23Q9P227 1491 aa11.24□□□□□ -0.61
CASP4-202ENST00000417440 SLIT1O75093 1534 aa11.24□□□□□ -0.61
CASP4-202ENST00000417440 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
CASP4-202ENST00000417440 KCNA6P17658 529 aa11.23□□□□□ -0.61
CASP4-202ENST00000417440 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
CASP4-202ENST00000417440 FGD6Q6ZV73 1430 aa11.23□□□□□ -0.61
CASP4-202ENST00000417440 SYNMO15061 1565 aa11.23□□□□□ -0.61
CASP4-202ENST00000417440 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
CASP4-202ENST00000417440 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
CASP4-202ENST00000417440 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
CASP4-202ENST00000417440 PPP1R15AO75807 674 aaPredicted RBP11.21□□□□□ -0.61
CASP4-202ENST00000417440 EFCAB6Q5THR3 1501 aa11.2□□□□□ -0.62
CASP4-202ENST00000417440 VASPP50552 380 aaPredicted RBP11.19□□□□□ -0.62
CASP4-202ENST00000417440 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
CASP4-202ENST00000417440 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
CASP4-202ENST00000417440 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
CASP4-202ENST00000417440 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
CASP4-202ENST00000417440 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
CASP4-202ENST00000417440 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
CASP4-202ENST00000417440 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
CASP4-202ENST00000417440 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
CASP4-202ENST00000417440 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
CASP4-202ENST00000417440 NOS1P29475 1434 aa11.17□□□□□ -0.62
CASP4-202ENST00000417440 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
CASP4-202ENST00000417440 MSH6P52701 1360 aa11.16□□□□□ -0.62
CASP4-202ENST00000417440 ITGAEP38570 1179 aa11.15□□□□□ -0.62
CASP4-202ENST00000417440 ANKRD50Q9ULJ7 1429 aa11.15□□□□□ -0.62
CASP4-202ENST00000417440 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
CASP4-202ENST00000417440 TET3O43151 1660 aa11.14□□□□□ -0.63
CASP4-202ENST00000417440 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
CASP4-202ENST00000417440 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
CASP4-202ENST00000417440 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
CASP4-202ENST00000417440 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
CASP4-202ENST00000417440 ADGRL2O95490 1459 aa11.12□□□□□ -0.63
CASP4-202ENST00000417440 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
CASP4-202ENST00000417440 PLEKHG1Q9ULL1 1385 aa11.12□□□□□ -0.63
CASP4-202ENST00000417440 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
CASP4-202ENST00000417440 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
CASP4-202ENST00000417440 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.11□□□□□ -0.63
CASP4-202ENST00000417440 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
CASP4-202ENST00000417440 ATF3P18847 181 aa11.1□□□□□ -0.63
CASP4-202ENST00000417440 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
CASP4-202ENST00000417440 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
CASP4-202ENST00000417440 KDM5AP29375 1690 aaKnown RBP11.09□□□□□ -0.63
CASP4-202ENST00000417440 RPRD2Q5VT52 1461 aaKnown RBP11.09□□□□□ -0.63
CASP4-202ENST00000417440 JCADQ9P266 1359 aa11.09□□□□□ -0.63
CASP4-202ENST00000417440 AMOTL2Q9Y2J4 779 aa11.08□□□□□ -0.64
CASP4-202ENST00000417440 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
CASP4-202ENST00000417440 NUP155O75694 1391 aa11.07□□□□□ -0.64
CASP4-202ENST00000417440 NUTM2BA6NNL0 878 aaPredicted RBP11.07□□□□□ -0.64
CASP4-202ENST00000417440 NUTM2EB1AL46 878 aaPredicted RBP11.07□□□□□ -0.64
CASP4-202ENST00000417440 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
CASP4-202ENST00000417440 NUTM2AQ8IVF1 878 aaPredicted RBP11.07□□□□□ -0.64
CASP4-202ENST00000417440 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
CASP4-202ENST00000417440 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
CASP4-202ENST00000417440 TRIM52Q96A61 297 aa11.06□□□□□ -0.64
CASP4-202ENST00000417440 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
CASP4-202ENST00000417440 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
CASP4-202ENST00000417440 GCC2Q8IWJ2 1684 aa11.05□□□□□ -0.64
CASP4-202ENST00000417440 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
CASP4-202ENST00000417440 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
CASP4-202ENST00000417440 MYO5BQ9ULV0 1848 aa11.03□□□□□ -0.64
CASP4-202ENST00000417440 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
CASP4-202ENST00000417440 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
CASP4-202ENST00000417440 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
CASP4-202ENST00000417440 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
CASP4-202ENST00000417440 PTPRUQ92729 1446 aa11.02□□□□□ -0.64
CASP4-202ENST00000417440 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.64
CASP4-202ENST00000417440 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
CASP4-202ENST00000417440 REM2Q8IYK8 340 aaPredicted RBP11.02□□□□□ -0.65
CASP4-202ENST00000417440 LRP6O75581 1613 aa11.02□□□□□ -0.65
CASP4-202ENST00000417440 CHD2O14647 1828 aaKnown RBP11.01□□□□□ -0.65
CASP4-202ENST00000417440 DDX17Q92841 729 aaKnown RBP11.01□□□□□ -0.65
CASP4-202ENST00000417440 UNC13BO14795 1591 aa11.01□□□□□ -0.65
CASP4-202ENST00000417440 E9PCH4 1651 aa11.01□□□□□ -0.65
CASP4-202ENST00000417440 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
CASP4-202ENST00000417440 COL16A1Q07092 1604 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms