RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 SPATA31D1Q6ZQQ2 1576 aa10.78□□□□□ -0.68
COPS3-202ENST00000417352 MAST1Q9Y2H9 1570 aa10.78□□□□□ -0.68
COPS3-202ENST00000417352 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
COPS3-202ENST00000417352 EID1Q9Y6B2 187 aa10.78□□□□□ -0.68
COPS3-202ENST00000417352 SHANK2Q9UPX8 1470 aa10.78□□□□□ -0.68
COPS3-202ENST00000417352 ZC3H13Q5T200 1668 aaKnown RBP10.78□□□□□ -0.68
COPS3-202ENST00000417352 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
COPS3-202ENST00000417352 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.68
COPS3-202ENST00000417352 HSPA1LP34931 641 aa10.77□□□□□ -0.69
COPS3-202ENST00000417352 ABCC5O15440 1437 aa10.76□□□□□ -0.69
COPS3-202ENST00000417352 NEURL4Q96JN8 1562 aa10.76□□□□□ -0.69
COPS3-202ENST00000417352 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
COPS3-202ENST00000417352 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
COPS3-202ENST00000417352 DAPK1P53355 1430 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 CPS1P31327 1500 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 ITGAEP38570 1179 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 PPARGC1BQ86YN6 1023 aaKnown RBP10.75□□□□□ -0.69
COPS3-202ENST00000417352 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
COPS3-202ENST00000417352 SOCS7O14512 581 aa10.74□□□□□ -0.69
COPS3-202ENST00000417352 LTKP29376 864 aa10.73□□□□□ -0.69
COPS3-202ENST00000417352 ERBINQ96RT1 1412 aa10.73□□□□□ -0.69
COPS3-202ENST00000417352 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
COPS3-202ENST00000417352 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
COPS3-202ENST00000417352 MROH1Q8NDA8 1641 aa10.72□□□□□ -0.69
COPS3-202ENST00000417352 UBR1Q8IWV7 1749 aa10.72□□□□□ -0.69
COPS3-202ENST00000417352 VWDEQ8N2E2 1590 aa10.71□□□□□ -0.69
COPS3-202ENST00000417352 MED14O60244 1454 aa10.7□□□□□ -0.7
COPS3-202ENST00000417352 SCAF11Q99590 1463 aaKnown RBP10.7□□□□□ -0.7
COPS3-202ENST00000417352 PPP1R15AO75807 674 aaPredicted RBP10.7□□□□□ -0.7
COPS3-202ENST00000417352 IDI1Q13907 227 aa10.7□□□□□ -0.7
COPS3-202ENST00000417352 SLC26A8Q96RN1 970 aa10.7□□□□□ -0.7
COPS3-202ENST00000417352 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
COPS3-202ENST00000417352 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
COPS3-202ENST00000417352 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
COPS3-202ENST00000417352 STRCP1A6NGW2 1772 aa10.68□□□□□ -0.7
COPS3-202ENST00000417352 GABBR2O75899 941 aa10.68□□□□□ -0.7
COPS3-202ENST00000417352 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
COPS3-202ENST00000417352 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
COPS3-202ENST00000417352 TMEM2Q9UHN6 1383 aa10.67□□□□□ -0.7
COPS3-202ENST00000417352 LRRC7Q96NW7 1537 aa10.67□□□□□ -0.7
COPS3-202ENST00000417352 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
COPS3-202ENST00000417352 ANKRD50Q9ULJ7 1429 aa10.66□□□□□ -0.7
COPS3-202ENST00000417352 EFCAB6Q5THR3 1501 aa10.65□□□□□ -0.7
COPS3-202ENST00000417352 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
COPS3-202ENST00000417352 C14orf37Q86TY3 774 aa10.65□□□□□ -0.7
COPS3-202ENST00000417352 SLC52A1Q9NWF4 448 aa10.65□□□□□ -0.7
COPS3-202ENST00000417352 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
COPS3-202ENST00000417352 SLIT1O75093 1534 aa10.63□□□□□ -0.71
COPS3-202ENST00000417352 SYNMO15061 1565 aa10.63□□□□□ -0.71
COPS3-202ENST00000417352 MED1Q15648 1581 aaPredicted RBP10.63□□□□□ -0.71
COPS3-202ENST00000417352 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
COPS3-202ENST00000417352 KCNA6P17658 529 aa10.62□□□□□ -0.71
COPS3-202ENST00000417352 TMEM94Q12767 1356 aa10.61□□□□□ -0.71
COPS3-202ENST00000417352 MYO5BQ9ULV0 1848 aa10.61□□□□□ -0.71
COPS3-202ENST00000417352 LMTK2Q8IWU2 1503 aa10.6□□□□□ -0.71
COPS3-202ENST00000417352 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
COPS3-202ENST00000417352 NUP155O75694 1391 aa10.6□□□□□ -0.71
COPS3-202ENST00000417352 ADGRL2O95490 1459 aa10.6□□□□□ -0.71
COPS3-202ENST00000417352 ADGRB3O60242 1522 aa10.59□□□□□ -0.71
COPS3-202ENST00000417352 XIRP1Q702N8 1843 aaKnown RBP10.59□□□□□ -0.71
COPS3-202ENST00000417352 ZNF326Q5BKZ1 582 aaKnown RBP10.59□□□□□ -0.71
COPS3-202ENST00000417352 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
COPS3-202ENST00000417352 NOS1P29475 1434 aa10.58□□□□□ -0.72
COPS3-202ENST00000417352 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
COPS3-202ENST00000417352 ALKQ9UM73 1620 aa10.58□□□□□ -0.72
COPS3-202ENST00000417352 MSH6P52701 1360 aa10.58□□□□□ -0.72
COPS3-202ENST00000417352 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
COPS3-202ENST00000417352 TET3O43151 1660 aa10.57□□□□□ -0.72
COPS3-202ENST00000417352 KDM5AP29375 1690 aaKnown RBP10.57□□□□□ -0.72
COPS3-202ENST00000417352 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
COPS3-202ENST00000417352 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
COPS3-202ENST00000417352 RPRD2Q5VT52 1461 aaKnown RBP10.56□□□□□ -0.72
COPS3-202ENST00000417352 E9PCH4 1651 aa10.55□□□□□ -0.72
COPS3-202ENST00000417352 ATF3P18847 181 aa10.55□□□□□ -0.72
COPS3-202ENST00000417352 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
COPS3-202ENST00000417352 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
COPS3-202ENST00000417352 ROBO1Q9Y6N7 1651 aa10.54□□□□□ -0.72
COPS3-202ENST00000417352 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
COPS3-202ENST00000417352 PLEKHG1Q9ULL1 1385 aa10.53□□□□□ -0.72
COPS3-202ENST00000417352 UNC13BO14795 1591 aa10.53□□□□□ -0.72
COPS3-202ENST00000417352 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
COPS3-202ENST00000417352 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
COPS3-202ENST00000417352 FAM135BQ49AJ0 1406 aa10.52□□□□□ -0.73
COPS3-202ENST00000417352 CHD2O14647 1828 aaKnown RBP10.52□□□□□ -0.73
COPS3-202ENST00000417352 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
COPS3-202ENST00000417352 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
COPS3-202ENST00000417352 ZFYVE9O95405 1425 aa10.51□□□□□ -0.73
COPS3-202ENST00000417352 NKTRP30414 1462 aaKnown RBP10.51□□□□□ -0.73
COPS3-202ENST00000417352 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
COPS3-202ENST00000417352 IQGAP3Q86VI3 1631 aa10.51□□□□□ -0.73
COPS3-202ENST00000417352 CADPS2Q86UW7 1296 aa10.5□□□□□ -0.73
COPS3-202ENST00000417352 C19orf44Q9H6X5 657 aa10.5□□□□□ -0.73
COPS3-202ENST00000417352 NUTM2BA6NNL0 878 aaPredicted RBP10.49□□□□□ -0.73
COPS3-202ENST00000417352 NUTM2EB1AL46 878 aaPredicted RBP10.49□□□□□ -0.73
COPS3-202ENST00000417352 NUTM2AQ8IVF1 878 aaPredicted RBP10.49□□□□□ -0.73
COPS3-202ENST00000417352 RGS17Q9UGC6 210 aaPredicted RBP10.49□□□□□ -0.73
COPS3-202ENST00000417352 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
COPS3-202ENST00000417352 CLCN6P51797 869 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms