RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TMC2Q8TDI7 906 aa8.25□□□□□ -1.09
CCNT1-202ENST00000417344 PNISRQ8TF01 805 aaKnown RBP8.25□□□□□ -1.09
CCNT1-202ENST00000417344 KIF7Q2M1P5 1343 aa8.25□□□□□ -1.09
CCNT1-202ENST00000417344 KTN1Q86UP2 1357 aaKnown RBP8.24□□□□□ -1.09
CCNT1-202ENST00000417344 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
CCNT1-202ENST00000417344 E2F4Q16254 413 aa8.24□□□□□ -1.09
CCNT1-202ENST00000417344 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
CCNT1-202ENST00000417344 MRE11P49959 708 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 DHX29Q7Z478 1369 aaKnown RBP8.22□□□□□ -1.09
CCNT1-202ENST00000417344 HFM1A2PYH4 1435 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 C3orf67Q6ZVT6 689 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 SMAP1Q8IYB5 467 aaPredicted RBP8.22□□□□□ -1.09
CCNT1-202ENST00000417344 MAP7D2Q96T17 732 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
CCNT1-202ENST00000417344 FOXK1P85037 733 aa8.21□□□□□ -1.1
CCNT1-202ENST00000417344 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
CCNT1-202ENST00000417344 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.1
CCNT1-202ENST00000417344 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
CCNT1-202ENST00000417344 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
CCNT1-202ENST00000417344 CRBNQ96SW2 442 aa8.21□□□□□ -1.1
CCNT1-202ENST00000417344 KIF3CO14782 793 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 CAMK2BQ13554 666 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 BECN1Q14457 450 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 CENPQQ7L2Z9 268 aaPredicted RBP8.2□□□□□ -1.1
CCNT1-202ENST00000417344 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 ARIH1Q9Y4X5 557 aaPredicted RBP8.2□□□□□ -1.1
CCNT1-202ENST00000417344 LRPPRCP42704 1394 aaKnown RBP8.2□□□□□ -1.1
CCNT1-202ENST00000417344 TRIM44Q96DX7 344 aaPredicted RBP8.2□□□□□ -1.1
CCNT1-202ENST00000417344 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
CCNT1-202ENST00000417344 MYOM3Q5VTT5 1437 aa8.2□□□□□ -1.1
CCNT1-202ENST00000417344 CNGB1Q14028 1251 aaPredicted RBP8.19□□□□□ -1.1
CCNT1-202ENST00000417344 AQRO60306 1485 aaKnown RBP eCLIP8.19□□□□□ -1.13e-7■■■■□ 23.4
CCNT1-202ENST00000417344 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
CCNT1-202ENST00000417344 PTPN23Q9H3S7 1636 aa8.19□□□□□ -1.1
CCNT1-202ENST00000417344 SPATA31E1Q6ZUB1 1445 aa8.19□□□□□ -1.1
CCNT1-202ENST00000417344 PLIN1O60240 522 aa8.19□□□□□ -1.1
CCNT1-202ENST00000417344 ANTXR1Q9H6X2 564 aa8.19□□□□□ -1.1
CCNT1-202ENST00000417344 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
CCNT1-202ENST00000417344 TERF1P54274 439 aa8.18□□□□□ -1.1
CCNT1-202ENST00000417344 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
CCNT1-202ENST00000417344 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
CCNT1-202ENST00000417344 ISY1Q9ULR0 285 aaKnown RBP8.18□□□□□ -1.1
CCNT1-202ENST00000417344 FMN1Q68DA7 1419 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 C2orf72A6NCS6 295 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 RIPK4P57078 832 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
CCNT1-202ENST00000417344 NCLP19338 710 aaKnown RBP8.17□□□□□ -1.1
CCNT1-202ENST00000417344 DSG2Q14126 1118 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 TAF7LQ5H9L4 462 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
CCNT1-202ENST00000417344 ZHX1Q9UKY1 873 aaPredicted RBP8.17□□□□□ -1.1
CCNT1-202ENST00000417344 NAP1L2Q9ULW6 460 aaPredicted RBP8.17□□□□□ -1.1
CCNT1-202ENST00000417344 NAIPQ13075 1403 aa8.16□□□□□ -1.1
CCNT1-202ENST00000417344 USP19O94966 1318 aa8.16□□□□□ -1.1
CCNT1-202ENST00000417344 CANXP27824 592 aaKnown RBP8.16□□□□□ -1.1
CCNT1-202ENST00000417344 MCM4P33991 863 aa8.16□□□□□ -1.1
CCNT1-202ENST00000417344 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
CCNT1-202ENST00000417344 CFAP43Q8NDM7 1665 aa8.16□□□□□ -1.1
CCNT1-202ENST00000417344 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
CCNT1-202ENST00000417344 FAM13BQ9NYF5 915 aa8.15□□□□□ -1.1
CCNT1-202ENST00000417344 POLR1AO95602 1720 aaPredicted RBP8.15□□□□□ -1.1
CCNT1-202ENST00000417344 PTPRKQ15262 1439 aa8.15□□□□□ -1.1
CCNT1-202ENST00000417344 TRAK2O60296 914 aa8.15□□□□□ -1.11
CCNT1-202ENST00000417344 OFD1O75665 1012 aa8.15□□□□□ -1.11
CCNT1-202ENST00000417344 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.11
CCNT1-202ENST00000417344 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.11
CCNT1-202ENST00000417344 MTERF4Q7Z6M4 381 aaKnown RBP8.15□□□□□ -1.11
CCNT1-202ENST00000417344 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
CCNT1-202ENST00000417344 PLPP6Q8IY26 295 aa8.14□□□□□ -1.11
CCNT1-202ENST00000417344 FGD6Q6ZV73 1430 aa8.14□□□□□ -1.11
CCNT1-202ENST00000417344 DMTNQ08495 405 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 NBPF8Q3BBV2 869 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 TMEM92Q6UXU6 159 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 MIA2Q96PC5 1412 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 KIF27Q86VH2 1401 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 C20orf194Q5TEA3 1177 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 CDCA7LQ96GN5 454 aa8.13□□□□□ -1.11
CCNT1-202ENST00000417344 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
CCNT1-202ENST00000417344 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
CCNT1-202ENST00000417344 IPO4Q8TEX9 1081 aaKnown RBP8.12□□□□□ -1.11
CCNT1-202ENST00000417344 BIVM-ERCC5R4GMW8 1640 aa8.12□□□□□ -1.11
CCNT1-202ENST00000417344 DENND4BO75064 1496 aaPredicted RBP8.12□□□□□ -1.11
CCNT1-202ENST00000417344 ZSCAN30Q86W11 494 aa8.12□□□□□ -1.11
CCNT1-202ENST00000417344 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
CCNT1-202ENST00000417344 POLR3GLQ9BT43 218 aa8.11□□□□□ -1.11
CCNT1-202ENST00000417344 SCUBE2Q9NQ36 999 aa8.11□□□□□ -1.11
CCNT1-202ENST00000417344 KIF15Q9NS87 1388 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 PCF11O94913 1555 aaKnown RBP8.1□□□□□ -1.11
CCNT1-202ENST00000417344 ROCK2O75116 1388 aaKnown RBP8.1□□□□□ -1.11
CCNT1-202ENST00000417344 DDX11L8A8MPP1 907 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 MSNP26038 577 aaKnown RBP8.1□□□□□ -1.11
CCNT1-202ENST00000417344 TNNT2P45379 298 aaPredicted RBP8.1□□□□□ -1.11
CCNT1-202ENST00000417344 CCDC173Q0VFZ6 552 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 RALBP1Q15311 655 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 HECW1Q76N89 1606 aa8.1□□□□□ -1.11
CCNT1-202ENST00000417344 CUX1P39880 1505 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms