RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
SMIM12-201ENST00000417239 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
SMIM12-201ENST00000417239 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
SMIM12-201ENST00000417239 EP400Q96L91 3159 aa14.08□□□□□ -0.15
SMIM12-201ENST00000417239 RXRBP28702 533 aa14.08□□□□□ -0.16
SMIM12-201ENST00000417239 NHSL1Q5SYE7 1610 aa14.08□□□□□ -0.16
SMIM12-201ENST00000417239 KIF15Q9NS87 1388 aa14.08□□□□□ -0.16
SMIM12-201ENST00000417239 IDI1Q13907 227 aa14.07□□□□□ -0.16
SMIM12-201ENST00000417239 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
SMIM12-201ENST00000417239 RGS12O14924 1447 aa14.07□□□□□ -0.16
SMIM12-201ENST00000417239 NOS1P29475 1434 aa14.07□□□□□ -0.16
SMIM12-201ENST00000417239 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
SMIM12-201ENST00000417239 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
SMIM12-201ENST00000417239 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
SMIM12-201ENST00000417239 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
SMIM12-201ENST00000417239 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
SMIM12-201ENST00000417239 KANK1Q14678 1352 aa14.02□□□□□ -0.17
SMIM12-201ENST00000417239 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
SMIM12-201ENST00000417239 AFF2P51816 1311 aa14.01□□□□□ -0.17
SMIM12-201ENST00000417239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMIM12-201ENST00000417239 ABCC5O15440 1437 aa14□□□□□ -0.17
SMIM12-201ENST00000417239 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
SMIM12-201ENST00000417239 BCANQ96GW7 911 aa13.99□□□□□ -0.17
SMIM12-201ENST00000417239 SETBP1Q9Y6X0 1596 aa13.99□□□□□ -0.17
SMIM12-201ENST00000417239 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
SMIM12-201ENST00000417239 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SMIM12-201ENST00000417239 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
SMIM12-201ENST00000417239 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
SMIM12-201ENST00000417239 CADPS2Q86UW7 1296 aa13.98□□□□□ -0.17
SMIM12-201ENST00000417239 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
SMIM12-201ENST00000417239 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
SMIM12-201ENST00000417239 RPRD2Q5VT52 1461 aaKnown RBP13.98□□□□□ -0.17
SMIM12-201ENST00000417239 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
SMIM12-201ENST00000417239 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
SMIM12-201ENST00000417239 XRN1Q8IZH2 1706 aaKnown RBP13.97□□□□□ -0.17
SMIM12-201ENST00000417239 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
SMIM12-201ENST00000417239 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
SMIM12-201ENST00000417239 DCCP43146 1447 aa13.96□□□□□ -0.18
SMIM12-201ENST00000417239 DAPK1P53355 1430 aa13.96□□□□□ -0.18
SMIM12-201ENST00000417239 TRPM2O94759 1503 aa13.95□□□□□ -0.18
SMIM12-201ENST00000417239 ATF3P18847 181 aa13.95□□□□□ -0.18
SMIM12-201ENST00000417239 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
SMIM12-201ENST00000417239 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
SMIM12-201ENST00000417239 UNC13BO14795 1591 aa13.95□□□□□ -0.18
SMIM12-201ENST00000417239 RBM6P78332 1123 aaKnown RBP13.94□□□□□ -0.18
SMIM12-201ENST00000417239 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
SMIM12-201ENST00000417239 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
SMIM12-201ENST00000417239 LAMC1P11047 1609 aa13.93□□□□□ -0.18
SMIM12-201ENST00000417239 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
SMIM12-201ENST00000417239 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
SMIM12-201ENST00000417239 MST1RQ04912 1400 aa13.92□□□□□ -0.18
SMIM12-201ENST00000417239 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
SMIM12-201ENST00000417239 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
SMIM12-201ENST00000417239 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
SMIM12-201ENST00000417239 QTRT2Q9H974 415 aaKnown RBP13.92□□□□□ -0.18
SMIM12-201ENST00000417239 E9PCH4 1651 aa13.91□□□□□ -0.18
SMIM12-201ENST00000417239 PTPRUQ92729 1446 aa13.91□□□□□ -0.18
SMIM12-201ENST00000417239 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
SMIM12-201ENST00000417239 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
SMIM12-201ENST00000417239 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
SMIM12-201ENST00000417239 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
SMIM12-201ENST00000417239 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
SMIM12-201ENST00000417239 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
SMIM12-201ENST00000417239 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
SMIM12-201ENST00000417239 LRP5O75197 1615 aa13.88□□□□□ -0.19
SMIM12-201ENST00000417239 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
SMIM12-201ENST00000417239 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
SMIM12-201ENST00000417239 COL22A1Q8NFW1 1626 aaPredicted RBP13.87□□□□□ -0.19
SMIM12-201ENST00000417239 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
SMIM12-201ENST00000417239 NGLY1Q96IV0 654 aa13.87□□□□□ -0.19
SMIM12-201ENST00000417239 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMIM12-201ENST00000417239 FOXD1Q16676 465 aa13.85□□□□□ -0.19
SMIM12-201ENST00000417239 ATRNO75882 1429 aa13.84□□□□□ -0.19
SMIM12-201ENST00000417239 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
SMIM12-201ENST00000417239 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
SMIM12-201ENST00000417239 DDX17Q92841 729 aaKnown RBP13.83□□□□□ -0.2
SMIM12-201ENST00000417239 BRWD3Q6RI45 1802 aa13.83□□□□□ -0.2
SMIM12-201ENST00000417239 ADGRL3Q9HAR2 1447 aa13.82□□□□□ -0.2
SMIM12-201ENST00000417239 CHIC2Q9UKJ5 165 aa13.82□□□□□ -0.2
SMIM12-201ENST00000417239 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
SMIM12-201ENST00000417239 SPHKAPQ2M3C7 1700 aa13.81□□□□□ -0.2
SMIM12-201ENST00000417239 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
SMIM12-201ENST00000417239 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
SMIM12-201ENST00000417239 USP21Q9UK80 565 aa13.8□□□□□ -0.2
SMIM12-201ENST00000417239 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
SMIM12-201ENST00000417239 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
SMIM12-201ENST00000417239 CCDC125Q86Z20 511 aa13.79□□□□□ -0.2
SMIM12-201ENST00000417239 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
SMIM12-201ENST00000417239 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
SMIM12-201ENST00000417239 GLI3P10071 1580 aa13.76□□□□□ -0.21
SMIM12-201ENST00000417239 MYOM2P54296 1465 aa13.76□□□□□ -0.21
SMIM12-201ENST00000417239 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
SMIM12-201ENST00000417239 METP08581 1390 aa13.76□□□□□ -0.21
SMIM12-201ENST00000417239 SOS2Q07890 1332 aaPredicted RBP13.75□□□□□ -0.21
SMIM12-201ENST00000417239 BLMP54132 1417 aaPredicted RBP13.74□□□□□ -0.21
SMIM12-201ENST00000417239 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
SMIM12-201ENST00000417239 PXDNQ92626 1479 aa13.7□□□□□ -0.22
SMIM12-201ENST00000417239 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
SMIM12-201ENST00000417239 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
SMIM12-201ENST00000417239 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms