RNA–Protein interactions for RNA: ENST00000416999.1

LINC-PINT-201, long intergenic non-protein coding RNA, p53 induced transcript, humanhuman

TSL 3

Gene LINC-PINT, Length 387 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-PINT-201ENST00000416999 STAG3Q9UJ98 1225 aa11.59□□□□□ -0.55
LINC-PINT-201ENST00000416999 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
LINC-PINT-201ENST00000416999 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
LINC-PINT-201ENST00000416999 KANK1Q14678 1352 aa11.58□□□□□ -0.56
LINC-PINT-201ENST00000416999 LTKP29376 864 aa11.58□□□□□ -0.56
LINC-PINT-201ENST00000416999 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
LINC-PINT-201ENST00000416999 TMEM2Q9UHN6 1383 aa11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 KCNA6P17658 529 aa11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 POLA2Q14181 598 aa11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 RGS17Q9UGC6 210 aaPredicted RBP11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 PIK3C2BO00750 1634 aa11.56□□□□□ -0.56
LINC-PINT-201ENST00000416999 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
LINC-PINT-201ENST00000416999 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
LINC-PINT-201ENST00000416999 PROSER2Q86WR7 435 aaPredicted RBP11.54□□□□□ -0.56
LINC-PINT-201ENST00000416999 TMEM94Q12767 1356 aa11.54□□□□□ -0.56
LINC-PINT-201ENST00000416999 CROCC2H7BZ55 1655 aa11.53□□□□□ -0.56
LINC-PINT-201ENST00000416999 NKTRP30414 1462 aaKnown RBP11.53□□□□□ -0.56
LINC-PINT-201ENST00000416999 BCANQ96GW7 911 aa11.53□□□□□ -0.56
LINC-PINT-201ENST00000416999 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
LINC-PINT-201ENST00000416999 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.57
LINC-PINT-201ENST00000416999 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
LINC-PINT-201ENST00000416999 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
LINC-PINT-201ENST00000416999 MSH6P52701 1360 aa11.52□□□□□ -0.57
LINC-PINT-201ENST00000416999 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
LINC-PINT-201ENST00000416999 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
LINC-PINT-201ENST00000416999 TET3O43151 1660 aa11.51□□□□□ -0.57
LINC-PINT-201ENST00000416999 IDI1Q13907 227 aa11.5□□□□□ -0.57
LINC-PINT-201ENST00000416999 POTEAQ6S8J7 498 aa11.5□□□□□ -0.57
LINC-PINT-201ENST00000416999 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
LINC-PINT-201ENST00000416999 NWD1Q149M9 1564 aa11.5□□□□□ -0.57
LINC-PINT-201ENST00000416999 JCADQ9P266 1359 aa11.49□□□□□ -0.57
LINC-PINT-201ENST00000416999 ABCC5O15440 1437 aa11.49□□□□□ -0.57
LINC-PINT-201ENST00000416999 ADGRB3O60242 1522 aa11.49□□□□□ -0.57
LINC-PINT-201ENST00000416999 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
LINC-PINT-201ENST00000416999 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
LINC-PINT-201ENST00000416999 KANK4Q5T7N3 995 aaPredicted RBP11.48□□□□□ -0.57
LINC-PINT-201ENST00000416999 SLC26A8Q96RN1 970 aa11.48□□□□□ -0.57
LINC-PINT-201ENST00000416999 SLAIN2Q9P270 581 aa11.48□□□□□ -0.57
LINC-PINT-201ENST00000416999 DAPK1P53355 1430 aa11.48□□□□□ -0.57
LINC-PINT-201ENST00000416999 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
LINC-PINT-201ENST00000416999 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
LINC-PINT-201ENST00000416999 NOS1P29475 1434 aa11.47□□□□□ -0.57
LINC-PINT-201ENST00000416999 CHD2O14647 1828 aaKnown RBP11.46□□□□□ -0.58
LINC-PINT-201ENST00000416999 FGD6Q6ZV73 1430 aa11.45□□□□□ -0.58
LINC-PINT-201ENST00000416999 SPATA31A6Q5VVP1 1343 aa11.45□□□□□ -0.58
LINC-PINT-201ENST00000416999 ZNF772Q68DY9 489 aaPredicted RBP11.45□□□□□ -0.58
LINC-PINT-201ENST00000416999 PLEKHG1Q9ULL1 1385 aa11.44□□□□□ -0.58
LINC-PINT-201ENST00000416999 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC-PINT-201ENST00000416999 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
LINC-PINT-201ENST00000416999 TBX22Q9Y458 520 aa11.43□□□□□ -0.58
LINC-PINT-201ENST00000416999 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
LINC-PINT-201ENST00000416999 MEX3CQ5U5Q3 659 aaKnown RBP11.42□□□□□ -0.58
LINC-PINT-201ENST00000416999 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
LINC-PINT-201ENST00000416999 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 RBM33Q96EV2 1170 aaKnown RBP11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
LINC-PINT-201ENST00000416999 ATF3P18847 181 aa11.4□□□□□ -0.58
LINC-PINT-201ENST00000416999 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
LINC-PINT-201ENST00000416999 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
LINC-PINT-201ENST00000416999 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
LINC-PINT-201ENST00000416999 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
LINC-PINT-201ENST00000416999 SHPRHQ149N8 1683 aa11.4□□□□□ -0.59
LINC-PINT-201ENST00000416999 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.59
LINC-PINT-201ENST00000416999 AHDC1Q5TGY3 1603 aaPredicted RBP11.39□□□□□ -0.59
LINC-PINT-201ENST00000416999 MYO5BQ9ULV0 1848 aa11.39□□□□□ -0.59
LINC-PINT-201ENST00000416999 TMEM131LA2VDJ0 1609 aa11.38□□□□□ -0.59
LINC-PINT-201ENST00000416999 ANKRD50Q9ULJ7 1429 aa11.37□□□□□ -0.59
LINC-PINT-201ENST00000416999 RXRBP28702 533 aa11.37□□□□□ -0.59
LINC-PINT-201ENST00000416999 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.37□□□□□ -0.59
LINC-PINT-201ENST00000416999 CDK12Q9NYV4 1490 aaPredicted RBP11.37□□□□□ -0.59
LINC-PINT-201ENST00000416999 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC-PINT-201ENST00000416999 DCCP43146 1447 aa11.35□□□□□ -0.59
LINC-PINT-201ENST00000416999 TRPM2O94759 1503 aa11.35□□□□□ -0.59
LINC-PINT-201ENST00000416999 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
LINC-PINT-201ENST00000416999 LRP6O75581 1613 aa11.35□□□□□ -0.59
LINC-PINT-201ENST00000416999 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
LINC-PINT-201ENST00000416999 UNC13BO14795 1591 aa11.33□□□□□ -0.6
LINC-PINT-201ENST00000416999 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
LINC-PINT-201ENST00000416999 ADAMTS13Q76LX8 1427 aa11.33□□□□□ -0.6
LINC-PINT-201ENST00000416999 FAM50AQ14320 339 aaKnown RBP11.32□□□□□ -0.6
LINC-PINT-201ENST00000416999 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
LINC-PINT-201ENST00000416999 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
LINC-PINT-201ENST00000416999 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
LINC-PINT-201ENST00000416999 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
LINC-PINT-201ENST00000416999 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
LINC-PINT-201ENST00000416999 E9PCH4 1651 aa11.3□□□□□ -0.6
LINC-PINT-201ENST00000416999 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
LINC-PINT-201ENST00000416999 IQGAP3Q86VI3 1631 aa11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 AFF2P51816 1311 aa11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 ASXL1Q8IXJ9 1541 aa11.29□□□□□ -0.6
LINC-PINT-201ENST00000416999 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms